Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1106
         (606 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           24   3.3  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           24   3.3  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           24   3.3  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           24   4.4  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           24   4.4  
AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.           24   4.4  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           24   4.4  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    24   4.4  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   4.4  

>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -1

Query: 147 PLPGPSTSARVW-SITSTTLTNFP 79
           P P P+T+  VW   T+TT T+ P
Sbjct: 210 PPPPPTTTTTVWIDPTATTTTHVP 233


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -1

Query: 147 PLPGPSTSARVW-SITSTTLTNFP 79
           P P P+T+  VW   T+TT T+ P
Sbjct: 211 PPPPPTTTTTVWIDPTATTTTHVP 234


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -1

Query: 147 PLPGPSTSARVW-SITSTTLTNFP 79
           P P P+T+  VW   T+TT T+ P
Sbjct: 211 PPPPPTTTTTVWIDPTATTTTHVP 234


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -1

Query: 147 PLPGPSTSARVW-SITSTTLTNFP 79
           P P P+T+  VW   T+TT T+ P
Sbjct: 211 PPPPPTTTTTVWIDPTATTTTHAP 234


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -1

Query: 147 PLPGPSTSARVW-SITSTTLTNFP 79
           P P P+T+  VW   T+TT T+ P
Sbjct: 211 PPPPPTTTTTVWIDPTATTTTHAP 234


>AY344833-1|AAR05804.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -1

Query: 147 PLPGPSTSARVW-SITSTTLTNFP 79
           P P P+T+  VW   T+TT T+ P
Sbjct: 211 PPPPPTTTTTVWIDPTATTTTHAP 234


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -1

Query: 147 PLPGPSTSARVW-SITSTTLTNFP 79
           P P P+T+  VW   T+TT T+ P
Sbjct: 210 PPPPPTTTTTVWIDPTATTTTHAP 233


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -1

Query: 147 PLPGPSTSARVW-SITSTTLTNFP 79
           P P P+T+  VW   T+TT T+ P
Sbjct: 211 PPPPPTTTTTVWIDPTATTTTHAP 234


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +2

Query: 41   PGRVALVADGPLKGKLVSVVDVIDQTRA 124
            P R A V  GPL G+ VSV  V +  R+
Sbjct: 1037 PTRAAAVDAGPLDGEQVSVDGVAELFRS 1064


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,172
Number of Sequences: 2352
Number of extensions: 12339
Number of successful extensions: 30
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)