Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1105
(733 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D57122 Cluster: PREDICTED: similar to trinucleot... 48 2e-04
UniRef50_UPI0000DB762C Cluster: PREDICTED: similar to flavin ade... 46 0.001
UniRef50_O15405 Cluster: TOX high mobility group box family memb... 42 0.012
UniRef50_UPI00015B4280 Cluster: PREDICTED: similar to ENSANGP000... 41 0.036
UniRef50_Q4SNT7 Cluster: Chromosome 15 SCAF14542, whole genome s... 34 4.1
UniRef50_Q8RZV3 Cluster: Zinc finger (C3HC4-type RING finger)-li... 34 4.1
UniRef50_A7QZ00 Cluster: Chromosome undetermined scaffold_260, w... 34 4.1
UniRef50_A1IHK7 Cluster: Cell fusion related protein; n=2; Dicty... 34 4.1
UniRef50_A0D4S2 Cluster: Chromosome undetermined scaffold_38, wh... 33 5.5
UniRef50_A0BR77 Cluster: Chromosome undetermined scaffold_122, w... 33 5.5
UniRef50_Q4T7I6 Cluster: Chromosome undetermined SCAF8089, whole... 33 7.2
UniRef50_Q4QHT8 Cluster: Putative uncharacterized protein; n=3; ... 33 7.2
UniRef50_A2AWS5 Cluster: Histone deacetylase 5; n=21; Euarchonto... 33 9.5
UniRef50_A5WFM4 Cluster: TonB-dependent siderophore receptor pre... 33 9.5
UniRef50_A3VPJ9 Cluster: OmpA family protein; n=1; Parvularcula ... 33 9.5
UniRef50_Q8IBB3 Cluster: Leucine-tRNA ligase; n=3; cellular orga... 33 9.5
UniRef50_Q5AXA8 Cluster: Putative uncharacterized protein; n=2; ... 33 9.5
UniRef50_O94842 Cluster: TOX high mobility group box family memb... 33 9.5
UniRef50_Q9UQL6 Cluster: Histone deacetylase 5; n=141; Eumetazoa... 33 9.5
>UniRef50_UPI0000D57122 Cluster: PREDICTED: similar to trinucleotide
repeat containing 9; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to trinucleotide repeat containing 9
- Tribolium castaneum
Length = 554
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/40 (55%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = +1
Query: 394 RPENLEVPLSATR-DAKNSVYAMNDQTFHTPSFGDEEFDI 510
R EN+++ LS + + +++ Y M DQTFHTPSFGDE+FDI
Sbjct: 44 RSENVDLSLSIPQSNFQSNGYDMGDQTFHTPSFGDEDFDI 83
>UniRef50_UPI0000DB762C Cluster: PREDICTED: similar to flavin
adenine dinucleotide synthetase isoform 1; n=1; Apis
mellifera|Rep: PREDICTED: similar to flavin adenine
dinucleotide synthetase isoform 1 - Apis mellifera
Length = 621
Score = 46.0 bits (104), Expect = 0.001
Identities = 24/46 (52%), Positives = 30/46 (65%), Gaps = 6/46 (13%)
Frame = +1
Query: 391 KRPENLEVPLSATRDAKNSV------YAMNDQTFHTPSFGDEEFDI 510
KR E+L+ L+ + +S YAM DQTFHTPSFGDE+FDI
Sbjct: 183 KRNESLDFSLNVPQHHHHSTQYHQSSYAMADQTFHTPSFGDEDFDI 228
>UniRef50_O15405 Cluster: TOX high mobility group box family member
3; n=34; Coelomata|Rep: TOX high mobility group box
family member 3 - Homo sapiens (Human)
Length = 576
Score = 42.3 bits (95), Expect = 0.012
Identities = 16/26 (61%), Positives = 22/26 (84%)
Frame = +1
Query: 433 DAKNSVYAMNDQTFHTPSFGDEEFDI 510
+A N+ +A ++QTFHTPS GDEEF+I
Sbjct: 41 EANNAFFAASEQTFHTPSLGDEEFEI 66
>UniRef50_UPI00015B4280 Cluster: PREDICTED: similar to
ENSANGP00000012345; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000012345 - Nasonia
vitripennis
Length = 706
Score = 40.7 bits (91), Expect = 0.036
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +1
Query: 451 YAMNDQTFHTPSFGDEEFDI 510
Y M +QTFHTPSFGDE+FDI
Sbjct: 176 YNMAEQTFHTPSFGDEDFDI 195
>UniRef50_Q4SNT7 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 662
Score = 33.9 bits (74), Expect = 4.1
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +1
Query: 451 YAMNDQTFHTPSFGDEEFDI 510
Y+ ++TFHTPS GDE+F+I
Sbjct: 30 YSEENKTFHTPSLGDEDFEI 49
>UniRef50_Q8RZV3 Cluster: Zinc finger (C3HC4-type RING finger)-like;
n=3; Oryza sativa|Rep: Zinc finger (C3HC4-type RING
finger)-like - Oryza sativa subsp. japonica (Rice)
Length = 313
Score = 33.9 bits (74), Expect = 4.1
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 338 HKLLPKIMIGHTSCTICTRDLKISKCPCPL 427
HK I GHT C +C+R+L +S+ CPL
Sbjct: 272 HKGAAFIPCGHTFCRLCSRELWVSRGNCPL 301
>UniRef50_A7QZ00 Cluster: Chromosome undetermined scaffold_260,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome undetermined scaffold_260, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 174
Score = 33.9 bits (74), Expect = 4.1
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 338 HKLLPKIMIGHTSCTICTRDLKISKCPCPL 427
HK I GHT C +C+R+L +S+ CPL
Sbjct: 133 HKGAAFIPCGHTFCRLCSRELWVSRGNCPL 162
>UniRef50_A1IHK7 Cluster: Cell fusion related protein; n=2;
Dictyostelium discoideum|Rep: Cell fusion related protein
- Dictyostelium discoideum (Slime mold)
Length = 2041
Score = 33.9 bits (74), Expect = 4.1
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = -3
Query: 347 AVCGHSIPIRAQNSKNYDGPFTASSTDFLKRYFDPCSRCTQIFGNRR*SESSLCCLL 177
+VC S+ I+ NS Y PF SS + K Y+ CS+ + F N+ + +C +L
Sbjct: 1510 SVCQSSLDIQVSNSLEYLNPFNISSIE--KGYYCICSKNFKNFFNKLLNSKQICKVL 1564
>UniRef50_A0D4S2 Cluster: Chromosome undetermined scaffold_38, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_38,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1625
Score = 33.5 bits (73), Expect = 5.5
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = -1
Query: 286 LQHQVLIFLKGTSTPAVAAHK-YLAID--VSQKVHFVVYYDNVIIRSSYQRLSMKFKQKS 116
+Q VLI+L GT+ +A H+ + I + ++H +V Y N I Y+ ++ + K
Sbjct: 221 IQGNVLIYLDGTNLTEIARHECHSEIKHLIPTQIHLIVVYANAKIEWLYKYITNNLEDKV 280
Query: 115 GVP 107
VP
Sbjct: 281 AVP 283
>UniRef50_A0BR77 Cluster: Chromosome undetermined scaffold_122, whole
genome shotgun sequence; n=3; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_122, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 4719
Score = 33.5 bits (73), Expect = 5.5
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Frame = -1
Query: 688 ACAGCIIKRLLIRRSTTWWAKPSCA-GFIMP--TCGAAWCNCVY*ICVFWTPDPGACCPC 518
AC C + L T K SC G+ + TC A NC+ C + DPG C C
Sbjct: 1416 ACTQCQLPCLQCTTQTA--CKTSCIDGYFLSGTTCSACPNNCLK--CS--STDPGNCSSC 1469
Query: 517 IKGYQILRHQMKECEM 470
I GY + K C +
Sbjct: 1470 ITGYHLDSGDCKSCSL 1485
>UniRef50_Q4T7I6 Cluster: Chromosome undetermined SCAF8089, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF8089, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 659
Score = 33.1 bits (72), Expect = 7.2
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 460 NDQTFHTPSFGDEEFDI 510
+ +TFHTPS GDEEF+I
Sbjct: 22 SSETFHTPSLGDEEFEI 38
>UniRef50_Q4QHT8 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 106
Score = 33.1 bits (72), Expect = 7.2
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = -3
Query: 266 FLKRYFDPCSRCTQIFGNRR*SESSLCCLLRQRDY*VQLSAIINEVQAKKRGAASVER-I 90
++KRY R TQ+ G +R SE L + + + + E + + R AS+++ I
Sbjct: 4 YVKRYVGTDQRVTQLVGFKRASERRLVVVCALSALGIYCAVYLYEEKERNRRHASIKKDI 63
Query: 89 AESTWPARGLG 57
W AR LG
Sbjct: 64 ERERWRARELG 74
>UniRef50_A2AWS5 Cluster: Histone deacetylase 5; n=21;
Euarchontoglires|Rep: Histone deacetylase 5 - Mus
musculus (Mouse)
Length = 1030
Score = 32.7 bits (71), Expect = 9.5
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +2
Query: 581 PRCAAGRH---DESSTGRLGPPGGAPSYQQPL 667
P+C H D+SS + GPPG PSY+ PL
Sbjct: 203 PKCWGAHHASLDQSSPPQSGPPGTPPSYKLPL 234
>UniRef50_A5WFM4 Cluster: TonB-dependent siderophore receptor
precursor; n=1; Psychrobacter sp. PRwf-1|Rep:
TonB-dependent siderophore receptor precursor -
Psychrobacter sp. PRwf-1
Length = 847
Score = 32.7 bits (71), Expect = 9.5
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +1
Query: 397 PENLEVPLSATRDAKNSVYAMNDQTFHTPSFGDEEFDIL*YTGSMRRDQESRIRIFSTHN 576
PE + L+A A+N+ +ND+ ++ S E+ D Y+ + D + I + +T
Sbjct: 346 PEEVVAELNAANAARNAAPKVNDKNYYGMSSDFEDIDSDVYSVFVEHDFDDDIHLTNTTR 405
Query: 577 Y--TTLRRR 597
Y TT+ RR
Sbjct: 406 YSKTTMDRR 414
>UniRef50_A3VPJ9 Cluster: OmpA family protein; n=1; Parvularcula
bermudensis HTCC2503|Rep: OmpA family protein -
Parvularcula bermudensis HTCC2503
Length = 175
Score = 32.7 bits (71), Expect = 9.5
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +2
Query: 503 LISFNTRAACAGIRSPEYAYSVHTITPRCAAGRHDESSTGRLGPPGGAPSYQQPLNNATC 682
LI+ T AACA PE + V + P +A R D++ G + PG A +Q + N
Sbjct: 12 LIALATLAACASTPEPEASAPVDAVVPERSA-RVDQAPEGPI--PGSAADLEQNVGNRVF 68
Query: 683 ASY 691
Y
Sbjct: 69 FEY 71
>UniRef50_Q8IBB3 Cluster: Leucine-tRNA ligase; n=3; cellular
organisms|Rep: Leucine-tRNA ligase - Plasmodium
falciparum (isolate 3D7)
Length = 1481
Score = 32.7 bits (71), Expect = 9.5
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = +1
Query: 382 NMYKRPENLEV-PLSATRDAKNSV--YAMNDQTFHTPSFGDEEFDIL*YTGSMRRDQESR 552
NM EN + PL KN + + ND F+ F D FD + +M +DQ S
Sbjct: 509 NMETYNENYFLYPLKDATKGKNYINGHNSNDNMFNDNMFNDNMFDDNMFDDNMLKDQNSY 568
Query: 553 IRIFSTHNYTTLR 591
++IF N L+
Sbjct: 569 VQIFLNKNEVILQ 581
>UniRef50_Q5AXA8 Cluster: Putative uncharacterized protein; n=2;
Trichocomaceae|Rep: Putative uncharacterized protein -
Emericella nidulans (Aspergillus nidulans)
Length = 336
Score = 32.7 bits (71), Expect = 9.5
Identities = 22/77 (28%), Positives = 34/77 (44%)
Frame = +2
Query: 476 TLLHLVTKNLISFNTRAACAGIRSPEYAYSVHTITPRCAAGRHDESSTGRLGPPGGAPSY 655
++L+L+ + + FN+ + + S E++ T TP C DES+ G L G
Sbjct: 33 SVLNLLNLSQVDFNSYDF-SSLGSREFSSKWQTNTPLCTDSLSDESAPGLLTEDMGISPI 91
Query: 656 QQPLNNATCASYKWARL 706
P ATC RL
Sbjct: 92 PMPAAEATCPQESEDRL 108
>UniRef50_O94842 Cluster: TOX high mobility group box family member
4; n=37; Tetrapoda|Rep: TOX high mobility group box
family member 4 - Homo sapiens (Human)
Length = 621
Score = 32.7 bits (71), Expect = 9.5
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1
Query: 466 QTFHTPSFGDEEFDI 510
+TFHTPS GDEEF+I
Sbjct: 25 ETFHTPSLGDEEFEI 39
>UniRef50_Q9UQL6 Cluster: Histone deacetylase 5; n=141;
Eumetazoa|Rep: Histone deacetylase 5 - Homo sapiens
(Human)
Length = 1122
Score = 32.7 bits (71), Expect = 9.5
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +2
Query: 581 PRCAAGRH---DESSTGRLGPPGGAPSYQQPL 667
P+C H D+SS + GPPG PSY+ PL
Sbjct: 211 PKCWGAHHASLDQSSPPQSGPPGTPPSYKLPL 242
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 782,834,304
Number of Sequences: 1657284
Number of extensions: 16572009
Number of successful extensions: 47109
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 44840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47090
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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