Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1105
(733 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 27 0.16
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 25 0.83
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 24 1.5
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 24 1.5
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 23 3.4
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 23 3.4
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 23 3.4
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 23 3.4
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 23 3.4
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 23 3.4
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 23 3.4
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 23 3.4
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 23 3.4
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 5.9
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 5.9
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 5.9
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 5.9
AM712904-1|CAN84643.1| 86|Tribolium castaneum hypothetical pro... 22 5.9
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 22 5.9
AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein. 21 7.8
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 21 7.8
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 27.1 bits (57), Expect = 0.16
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +2
Query: 356 IMIGHTSCTICTRDLKISKCPCPLLATPRTVC 451
I G SCT+CT D K + C + + C
Sbjct: 767 IPTGFDSCTVCTCDAKYLEIKCKRIYNEKQCC 798
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 24.6 bits (51), Expect = 0.83
Identities = 15/73 (20%), Positives = 31/73 (42%)
Frame = +1
Query: 328 MECPQTASENHDRSYKLYNMYKRPENLEVPLSATRDAKNSVYAMNDQTFHTPSFGDEEFD 507
+E + +E+ D K Y + + + L D++N +HT + GDE
Sbjct: 410 LELFEELAEDKDGYKKFYEQFSK----NIKLGIHEDSQNRAKLSELLRYHTSASGDEACS 465
Query: 508 IL*YTGSMRRDQE 546
+ Y ++ +Q+
Sbjct: 466 LKDYVSRIKPNQK 478
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 23.8 bits (49), Expect = 1.5
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +2
Query: 611 SSTGRLGPPGGAPSYQQPLNNATCASY-KWARLQVHQHSHQ 730
+ G LGP G P Q +NN + + Q HQ HQ
Sbjct: 144 TQNGVLGPTGSPPLTTQSMNNHHMGHHMQEQHPQHHQPHHQ 184
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 23.8 bits (49), Expect = 1.5
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +2
Query: 611 SSTGRLGPPGGAPSYQQPLNNATCASY-KWARLQVHQHSHQ 730
+ G LGP G P Q +NN + + Q HQ HQ
Sbjct: 146 TQNGVLGPTGSPPLTTQSMNNHHMGHHMQEQHPQHHQPHHQ 186
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 531 APGSGVQNTHIQYTQL 578
APG G+Q T YTQL
Sbjct: 61 APGHGLQPTMGDYTQL 76
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 531 APGSGVQNTHIQYTQL 578
APG G+Q T YTQL
Sbjct: 61 APGHGLQPTMGDYTQL 76
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 531 APGSGVQNTHIQYTQL 578
APG G+Q T YTQL
Sbjct: 61 APGHGLQPTMGDYTQL 76
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 531 APGSGVQNTHIQYTQL 578
APG G+Q T YTQL
Sbjct: 61 APGHGLQPTMGDYTQL 76
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 531 APGSGVQNTHIQYTQL 578
APG G+Q T YTQL
Sbjct: 61 APGHGLQPTMGDYTQL 76
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 531 APGSGVQNTHIQYTQL 578
APG G+Q T YTQL
Sbjct: 17 APGHGLQPTMGDYTQL 32
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 531 APGSGVQNTHIQYTQL 578
APG G+Q T YTQL
Sbjct: 61 APGHGLQPTMGDYTQL 76
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 531 APGSGVQNTHIQYTQL 578
APG G+Q T YTQL
Sbjct: 61 APGHGLQPTMGDYTQL 76
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 531 APGSGVQNTHIQYTQL 578
APG G+Q T YTQL
Sbjct: 61 APGHGLQPTMGDYTQL 76
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.9
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -3
Query: 263 LKRYFDPCSRCTQIFGNRR*SESSLCCLLRQRDY*VQLSA 144
+K+Y S + + LC LL QR Y V+ SA
Sbjct: 819 MKKYTTSSSEARHYVQYDQGEDRWLCTLLLQRGYRVEYSA 858
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.9
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -3
Query: 263 LKRYFDPCSRCTQIFGNRR*SESSLCCLLRQRDY*VQLSA 144
+K+Y S + + LC LL QR Y V+ SA
Sbjct: 819 MKKYTTSSSEARHYVQYDQGEDRWLCTLLLQRGYRVEYSA 858
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.9
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -3
Query: 263 LKRYFDPCSRCTQIFGNRR*SESSLCCLLRQRDY*VQLSA 144
+K+Y S + + LC LL QR Y V+ SA
Sbjct: 819 MKKYTTSSSEARHYVQYDQGEDRWLCTLLLQRGYRVEYSA 858
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.9
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -3
Query: 263 LKRYFDPCSRCTQIFGNRR*SESSLCCLLRQRDY*VQLSA 144
+K+Y S + + LC LL QR Y V+ SA
Sbjct: 819 MKKYTTSSSEARHYVQYDQGEDRWLCTLLLQRGYRVEYSA 858
>AM712904-1|CAN84643.1| 86|Tribolium castaneum hypothetical
protein protein.
Length = 86
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 464 IRHFTLLHLVTKNLISFN 517
++HF L L KN I FN
Sbjct: 46 VKHFHPLALSNKNAIDFN 63
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +3
Query: 288 WTVIIFRVLCTNWNGVSTNCFR 353
WT+ L W+ STNC R
Sbjct: 246 WTIYEMYHLAILWSCTSTNCPR 267
>AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein.
Length = 209
Score = 21.4 bits (43), Expect = 7.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 605 DESSTGRLGPPGGAPSYQQPLNN 673
D +ST + PP + SY P+N+
Sbjct: 65 DGASTPDVRPPSSSLSYGGPVND 87
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 21.4 bits (43), Expect = 7.8
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 605 DESSTGRLGPPGGAPSYQQPLNN 673
D +ST + PP + SY P+N+
Sbjct: 221 DGASTPDVRPPSSSLSYGGPVND 243
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,104
Number of Sequences: 336
Number of extensions: 4410
Number of successful extensions: 28
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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