Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1105
         (733 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    28   0.34 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    27   0.60 
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   4.2  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       24   5.6  
AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450 CY...    24   5.6  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 27.9 bits (59), Expect = 0.34
 Identities = 18/63 (28%), Positives = 27/63 (42%)
 Frame = -1

Query: 394  SCTYCTACMTYHDFRKQFVDTPFQFVHRTRKIMTVHLQHQVLIFLKGTSTPAVAAHKYLA 215
            +C  CT C      ++   D P Q V + R      + +   I +KGT   AV    Y++
Sbjct: 1392 NCVKCTRCRPKL-IQQPMADLPEQRVRQARPFSISGVDYAGPIMVKGTHRRAVPTKGYIS 1450

Query: 214  IDV 206
            I V
Sbjct: 1451 IFV 1453


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 27.1 bits (57), Expect = 0.60
 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = +3

Query: 498 RI*YPLIHGQHAPGSGVQNT-HIQYTQLH--HAAPQVGMMNPAQDGLAHQ 638
           R+ Y L H QH PG+GVQ    I   Q H  H   Q  ++ P + G A Q
Sbjct: 225 RMEYLLPHQQHPPGAGVQGAGPIPSQQKHQQHQQQQQSVLLP-KHGTARQ 273


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 509 SFNTRAACAGIRSPEYAYSVHTITPRCAAGRHDE 610
           ++ + A C G      AY V  +TP  AA R+++
Sbjct: 641 NYRSYAQCKGRAKAPGAYHVLFVTPENAASRNEQ 674


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 632 PPGGAPSYQQPLNNATCASY 691
           P G  P+Y++P  N   A++
Sbjct: 379 PTGAPPTYEEPFRNVATANH 398


>AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450
           CYP9L1 protein protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 287 FTASSTDFLKRYFDPCSRCTQIFGNRR 207
           +   + DF K+Y  PC     +FG+ R
Sbjct: 21  YLTHNNDFFKKYPIPCLPVEPLFGSSR 47


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 845,762
Number of Sequences: 2352
Number of extensions: 19769
Number of successful extensions: 77
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 77
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)