Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1105
(733 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC051824-1|AAH51824.1| 1122|Homo sapiens histone deacetylase 5 p... 33 1.4
BC013689-1|AAH13689.1| 621|Homo sapiens TOX high mobility group... 33 1.4
BC013140-1|AAH13140.1| 363|Homo sapiens Unknown (protein for IM... 33 1.4
AF132608-1|AAD29047.1| 1122|Homo sapiens histone deacetylase 5 p... 33 1.4
AF039691-1|AAC18040.1| 897|Homo sapiens antigen NY-CO-9 protein. 33 1.4
AB018280-1|BAA34457.2| 629|Homo sapiens KIAA0737 protein protein. 33 1.4
AB011172-1|BAA25526.2| 1080|Homo sapiens KIAA0600 protein protein. 33 1.4
AB209000-1|BAD92237.1| 139|Homo sapiens cytochrome b5 reductase... 30 7.4
AF072825-1|AAC25598.1| 526|Homo sapiens Raf responsive zinc fin... 30 9.8
AB058677-1|BAB47410.1| 969|Homo sapiens MEGF11 protein (KIAA178... 30 9.8
>BC051824-1|AAH51824.1| 1122|Homo sapiens histone deacetylase 5
protein.
Length = 1122
Score = 32.7 bits (71), Expect = 1.4
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +2
Query: 581 PRCAAGRH---DESSTGRLGPPGGAPSYQQPL 667
P+C H D+SS + GPPG PSY+ PL
Sbjct: 211 PKCWGAHHASLDQSSPPQSGPPGTPPSYKLPL 242
>BC013689-1|AAH13689.1| 621|Homo sapiens TOX high mobility group
box family member 4 protein.
Length = 621
Score = 32.7 bits (71), Expect = 1.4
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1
Query: 466 QTFHTPSFGDEEFDI 510
+TFHTPS GDEEF+I
Sbjct: 25 ETFHTPSLGDEEFEI 39
>BC013140-1|AAH13140.1| 363|Homo sapiens Unknown (protein for
IMAGE:3867625) protein.
Length = 363
Score = 32.7 bits (71), Expect = 1.4
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +2
Query: 581 PRCAAGRH---DESSTGRLGPPGGAPSYQQPL 667
P+C H D+SS + GPPG PSY+ PL
Sbjct: 138 PKCWGAHHASLDQSSPPQSGPPGTPPSYKLPL 169
>AF132608-1|AAD29047.1| 1122|Homo sapiens histone deacetylase 5
protein.
Length = 1122
Score = 32.7 bits (71), Expect = 1.4
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +2
Query: 581 PRCAAGRH---DESSTGRLGPPGGAPSYQQPL 667
P+C H D+SS + GPPG PSY+ PL
Sbjct: 211 PKCWGAHHASLDQSSPPQSGPPGTPPSYKLPL 242
>AF039691-1|AAC18040.1| 897|Homo sapiens antigen NY-CO-9 protein.
Length = 897
Score = 32.7 bits (71), Expect = 1.4
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +2
Query: 581 PRCAAGRH---DESSTGRLGPPGGAPSYQQPL 667
P+C H D+SS + GPPG PSY+ PL
Sbjct: 23 PKCWGAHHASLDQSSPPQSGPPGTPPSYKLPL 54
>AB018280-1|BAA34457.2| 629|Homo sapiens KIAA0737 protein protein.
Length = 629
Score = 32.7 bits (71), Expect = 1.4
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1
Query: 466 QTFHTPSFGDEEFDI 510
+TFHTPS GDEEF+I
Sbjct: 33 ETFHTPSLGDEEFEI 47
>AB011172-1|BAA25526.2| 1080|Homo sapiens KIAA0600 protein protein.
Length = 1080
Score = 32.7 bits (71), Expect = 1.4
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +2
Query: 581 PRCAAGRH---DESSTGRLGPPGGAPSYQQPL 667
P+C H D+SS + GPPG PSY+ PL
Sbjct: 254 PKCWGAHHASLDQSSPPQSGPPGTPPSYKLPL 285
>AB209000-1|BAD92237.1| 139|Homo sapiens cytochrome b5 reductase
b5R.2 isoform 2 variant protein.
Length = 139
Score = 30.3 bits (65), Expect = 7.4
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +2
Query: 482 LHLVTKNLISFNTRAACAGIRSPEYAYSVHTITPRCAAGRHDESSTGRLGPP 637
L L+ K IS NTR G+ SP++ + P G H + LGPP
Sbjct: 62 LPLIEKEKISHNTRRFRFGLPSPDHVLGLPVGEP--GLGHHQDWGLWGLGPP 111
>AF072825-1|AAC25598.1| 526|Homo sapiens Raf responsive zinc finger
protein protein.
Length = 526
Score = 29.9 bits (64), Expect = 9.8
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +2
Query: 623 RLGPPGGAPSYQQPLNNATCA-SYKW-ARLQVHQHSH 727
R G PGGA S +Q L++ TC S+K+ L H+ +H
Sbjct: 218 RRGRPGGAASQEQKLSSDTCGKSFKFLGTLSRHRKAH 254
>AB058677-1|BAB47410.1| 969|Homo sapiens MEGF11 protein (KIAA1781)
protein.
Length = 969
Score = 29.9 bits (64), Expect = 9.8
Identities = 33/94 (35%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = -1
Query: 649 RSTTWWAKPSCAGFIMPTCGAAWCN--CVY*ICVFWTPDPGACCPCIKGYQILRHQMKEC 476
RS T A+ S G P G A C CV+ CV +PD C P G C
Sbjct: 7 RSITHDAQTSSTGSSAP--GTALCTEECVHGRCV--SPDTCHCEPGWGGPDC----SSGC 58
Query: 475 EMSDHSWRTHCSWRRE*RTGALRDFQVSCTYCTA 374
+ SDH W HCS R + + GAL + C A
Sbjct: 59 D-SDH-WGPHCSNRCQCQNGALCNPITGACVCAA 90
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,568,425
Number of Sequences: 237096
Number of extensions: 2682689
Number of successful extensions: 6850
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6850
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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