Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1103
         (279 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   3.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   3.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   3.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   3.3  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    20   4.3  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    20   4.3  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    19   9.9  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 3.3
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -3

Query: 145 DNTGAADNFPCLAILVNLAETSPFSKLFVVV 53
           + +G+  N  CL I V + +   +   FV+V
Sbjct: 52  EESGSMANQKCLEITVKILKIVAYLVTFVIV 82


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 3.3
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -3

Query: 145 DNTGAADNFPCLAILVNLAETSPFSKLFVVV 53
           + +G+  N  CL I V + +   +   FV+V
Sbjct: 52  EESGSMANQKCLEITVKILKIVAYLVTFVIV 82


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 3.3
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -3

Query: 145 DNTGAADNFPCLAILVNLAETSPFSKLFVVV 53
           + +G+  N  CL I V + +   +   FV+V
Sbjct: 52  EESGSMANQKCLEITVKILKIVAYLVTFVIV 82


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 3.3
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -3

Query: 145 DNTGAADNFPCLAILVNLAETSPFSKLFVVV 53
           + +G+  N  CL I V + +   +   FV+V
Sbjct: 52  EESGSMANQKCLEITVKILKIVAYLVTFVIV 82


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 20.2 bits (40), Expect = 4.3
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -3

Query: 121 FPCLAILVNLAETSPFSKLFVVVNLDQ 41
           F  +AI  +LAE S ++  +  V+LD+
Sbjct: 9   FFVIAIASSLAENSKYTTKYDNVDLDE 35


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 4.3
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +2

Query: 158 GEETPALDVLKDYLKXXXXXLGVML 232
           G +    D+  DYL      LGV L
Sbjct: 22  GSKKTVFDIPNDYLNDKYKPLGVSL 46


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 19.0 bits (37), Expect = 9.9
 Identities = 5/7 (71%), Positives = 6/7 (85%)
 Frame = +1

Query: 106 WQGKENC 126
           WQ +ENC
Sbjct: 584 WQNEENC 590


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,399
Number of Sequences: 336
Number of extensions: 998
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  4684108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)