BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1103 (279 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value X89659-1|CAA61806.1| 151|Drosophila melanogaster 40S ribosomal ... 124 2e-29 AY058531-1|AAL13760.1| 139|Drosophila melanogaster LD23808p pro... 124 2e-29 AE014296-2235|AAN11844.2| 139|Drosophila melanogaster CG11271-P... 124 2e-29 AE014296-2234|AAN11845.1| 139|Drosophila melanogaster CG11271-P... 124 2e-29 BT011112-1|AAR82779.1| 2851|Drosophila melanogaster LD31436p pro... 29 1.2 AF425651-1|AAL65911.1| 4001|Drosophila melanogaster multiple ank... 29 1.2 AE014297-3507|AAO41601.1| 4001|Drosophila melanogaster CG33106-P... 29 1.2 AE014297-3506|AAO41600.1| 4001|Drosophila melanogaster CG33106-P... 29 1.2 BT004503-1|AAO42667.1| 2201|Drosophila melanogaster GH07949p pro... 27 4.7 AE014298-2947|AAF49026.2| 2529|Drosophila melanogaster CG32529-P... 27 4.7 BT001615-1|AAN71370.1| 729|Drosophila melanogaster RE34119p pro... 26 6.2 AF216975-1|AAF34749.1| 857|Drosophila melanogaster l(2)01289 H9... 26 6.2 AF216974-1|AAF34748.1| 566|Drosophila melanogaster l(2)01289 lo... 26 6.2 AF216973-2|AAF34747.1| 857|Drosophila melanogaster l(2)01289 H9... 26 6.2 AF216973-1|AAF34746.1| 1703|Drosophila melanogaster l(2)01289 lo... 26 6.2 AE013599-216|AAM70821.2| 857|Drosophila melanogaster CG9432-PA,... 26 6.2 AE013599-215|ABI31026.1| 1855|Drosophila melanogaster CG9432-PD,... 26 6.2 AE013599-214|AAN16126.1| 1703|Drosophila melanogaster CG9432-PB,... 26 6.2 BT024238-1|ABC86300.1| 385|Drosophila melanogaster LD04512p pro... 26 8.2 AY113626-1|AAM29631.1| 163|Drosophila melanogaster RH70774p pro... 26 8.2 AY102665-1|AAM27494.1| 522|Drosophila melanogaster GH22474p pro... 26 8.2 AY089591-1|AAL90329.1| 594|Drosophila melanogaster RE18459p pro... 26 8.2 AE014298-2736|AAF48856.1| 522|Drosophila melanogaster CG6335-PA... 26 8.2 AE014298-2735|AAN09471.1| 563|Drosophila melanogaster CG6335-PB... 26 8.2 AE014297-2780|AAF55756.1| 556|Drosophila melanogaster CG4360-PA... 26 8.2 AE014297-662|AAF54156.2| 594|Drosophila melanogaster CG10092-PA... 26 8.2 AE013599-321|AAF59278.1| 163|Drosophila melanogaster CG11086-PA... 26 8.2 >X89659-1|CAA61806.1| 151|Drosophila melanogaster 40S ribosomal protein S12 protein. Length = 151 Score = 124 bits (298), Expect = 2e-29 Identities = 53/67 (79%), Positives = 63/67 (94%) Frame = +2 Query: 2 KLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALD 181 KLV ALCNEHQIPL++VD++KKLGEW+GLCKIDK+GK RK+ GCS VVIKDFGEETPALD Sbjct: 82 KLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIKDFGEETPALD 141 Query: 182 VLKDYLK 202 V+KD+L+ Sbjct: 142 VVKDHLR 148 >AY058531-1|AAL13760.1| 139|Drosophila melanogaster LD23808p protein. Length = 139 Score = 124 bits (298), Expect = 2e-29 Identities = 53/67 (79%), Positives = 63/67 (94%) Frame = +2 Query: 2 KLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALD 181 KLV ALCNEHQIPL++VD++KKLGEW+GLCKIDK+GK RK+ GCS VVIKDFGEETPALD Sbjct: 70 KLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIKDFGEETPALD 129 Query: 182 VLKDYLK 202 V+KD+L+ Sbjct: 130 VVKDHLR 136 >AE014296-2235|AAN11844.2| 139|Drosophila melanogaster CG11271-PC, isoform C protein. Length = 139 Score = 124 bits (298), Expect = 2e-29 Identities = 53/67 (79%), Positives = 63/67 (94%) Frame = +2 Query: 2 KLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALD 181 KLV ALCNEHQIPL++VD++KKLGEW+GLCKIDK+GK RK+ GCS VVIKDFGEETPALD Sbjct: 70 KLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIKDFGEETPALD 129 Query: 182 VLKDYLK 202 V+KD+L+ Sbjct: 130 VVKDHLR 136 >AE014296-2234|AAN11845.1| 139|Drosophila melanogaster CG11271-PB, isoform B protein. Length = 139 Score = 124 bits (298), Expect = 2e-29 Identities = 53/67 (79%), Positives = 63/67 (94%) Frame = +2 Query: 2 KLVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALD 181 KLV ALCNEHQIPL++VD++KKLGEW+GLCKIDK+GK RK+ GCS VVIKDFGEETPALD Sbjct: 70 KLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIKDFGEETPALD 129 Query: 182 VLKDYLK 202 V+KD+L+ Sbjct: 130 VVKDHLR 136 >BT011112-1|AAR82779.1| 2851|Drosophila melanogaster LD31436p protein. Length = 2851 Score = 28.7 bits (61), Expect = 1.2 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +1 Query: 172 SVGCAQGLPQVVELILRCNANPY 240 S+ CA G VVEL+L+ NA+P+ Sbjct: 423 SLACAGGHQSVVELLLKNNADPF 445 >AF425651-1|AAL65911.1| 4001|Drosophila melanogaster multiple ankyrin repeat singleKH domain protein protein. Length = 4001 Score = 28.7 bits (61), Expect = 1.2 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +1 Query: 172 SVGCAQGLPQVVELILRCNANPY 240 S+ CA G VVEL+L+ NA+P+ Sbjct: 987 SLACAGGHQSVVELLLKNNADPF 1009 >AE014297-3507|AAO41601.1| 4001|Drosophila melanogaster CG33106-PB, isoform B protein. Length = 4001 Score = 28.7 bits (61), Expect = 1.2 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +1 Query: 172 SVGCAQGLPQVVELILRCNANPY 240 S+ CA G VVEL+L+ NA+P+ Sbjct: 987 SLACAGGHQSVVELLLKNNADPF 1009 >AE014297-3506|AAO41600.1| 4001|Drosophila melanogaster CG33106-PA, isoform A protein. Length = 4001 Score = 28.7 bits (61), Expect = 1.2 Identities = 12/23 (52%), Positives = 17/23 (73%) Frame = +1 Query: 172 SVGCAQGLPQVVELILRCNANPY 240 S+ CA G VVEL+L+ NA+P+ Sbjct: 987 SLACAGGHQSVVELLLKNNADPF 1009 >BT004503-1|AAO42667.1| 2201|Drosophila melanogaster GH07949p protein. Length = 2201 Score = 26.6 bits (56), Expect = 4.7 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = -3 Query: 172 WSFLAEIFDDNTGAADNFPCLAILVNLAETSPFS 71 WS +I+D +G+ D P +L +L E FS Sbjct: 126 WSGAKDIYDFKSGSEDEEPIKMVLPSLKELREFS 159 >AE014298-2947|AAF49026.2| 2529|Drosophila melanogaster CG32529-PA, isoform A protein. Length = 2529 Score = 26.6 bits (56), Expect = 4.7 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = -3 Query: 172 WSFLAEIFDDNTGAADNFPCLAILVNLAETSPFS 71 WS +I+D +G+ D P +L +L E FS Sbjct: 454 WSGAKDIYDFKSGSEDEEPIKMVLPSLKELREFS 487 >BT001615-1|AAN71370.1| 729|Drosophila melanogaster RE34119p protein. Length = 729 Score = 26.2 bits (55), Expect = 6.2 Identities = 8/20 (40%), Positives = 15/20 (75%) Frame = +2 Query: 20 CNEHQIPLVKVDNNKKLGEW 79 C+++ I VK+D++K+ EW Sbjct: 201 CDQNDIAFVKIDDDKEAKEW 220 >AF216975-1|AAF34749.1| 857|Drosophila melanogaster l(2)01289 H9 form protein. Length = 857 Score = 26.2 bits (55), Expect = 6.2 Identities = 8/20 (40%), Positives = 15/20 (75%) Frame = +2 Query: 20 CNEHQIPLVKVDNNKKLGEW 79 C+++ I VK+D++K+ EW Sbjct: 201 CDQNDIAFVKIDDDKEAKEW 220 >AF216974-1|AAF34748.1| 566|Drosophila melanogaster l(2)01289 long form protein. Length = 566 Score = 26.2 bits (55), Expect = 6.2 Identities = 8/20 (40%), Positives = 15/20 (75%) Frame = +2 Query: 20 CNEHQIPLVKVDNNKKLGEW 79 C+++ I VK+D++K+ EW Sbjct: 532 CDQNDIAFVKIDDDKEAKEW 551 >AF216973-2|AAF34747.1| 857|Drosophila melanogaster l(2)01289 H9 form protein. Length = 857 Score = 26.2 bits (55), Expect = 6.2 Identities = 8/20 (40%), Positives = 15/20 (75%) Frame = +2 Query: 20 CNEHQIPLVKVDNNKKLGEW 79 C+++ I VK+D++K+ EW Sbjct: 201 CDQNDIAFVKIDDDKEAKEW 220 >AF216973-1|AAF34746.1| 1703|Drosophila melanogaster l(2)01289 long form protein. Length = 1703 Score = 26.2 bits (55), Expect = 6.2 Identities = 8/20 (40%), Positives = 15/20 (75%) Frame = +2 Query: 20 CNEHQIPLVKVDNNKKLGEW 79 C+++ I VK+D++K+ EW Sbjct: 532 CDQNDIAFVKIDDDKEAKEW 551 >AE013599-216|AAM70821.2| 857|Drosophila melanogaster CG9432-PA, isoform A protein. Length = 857 Score = 26.2 bits (55), Expect = 6.2 Identities = 8/20 (40%), Positives = 15/20 (75%) Frame = +2 Query: 20 CNEHQIPLVKVDNNKKLGEW 79 C+++ I VK+D++K+ EW Sbjct: 201 CDQNDIAFVKIDDDKEAKEW 220 >AE013599-215|ABI31026.1| 1855|Drosophila melanogaster CG9432-PD, isoform D protein. Length = 1855 Score = 26.2 bits (55), Expect = 6.2 Identities = 8/20 (40%), Positives = 15/20 (75%) Frame = +2 Query: 20 CNEHQIPLVKVDNNKKLGEW 79 C+++ I VK+D++K+ EW Sbjct: 532 CDQNDIAFVKIDDDKEAKEW 551 >AE013599-214|AAN16126.1| 1703|Drosophila melanogaster CG9432-PB, isoform B protein. Length = 1703 Score = 26.2 bits (55), Expect = 6.2 Identities = 8/20 (40%), Positives = 15/20 (75%) Frame = +2 Query: 20 CNEHQIPLVKVDNNKKLGEW 79 C+++ I VK+D++K+ EW Sbjct: 532 CDQNDIAFVKIDDDKEAKEW 551 >BT024238-1|ABC86300.1| 385|Drosophila melanogaster LD04512p protein. Length = 385 Score = 25.8 bits (54), Expect = 8.2 Identities = 10/34 (29%), Positives = 17/34 (50%) Frame = -1 Query: 177 NAGVSSPKSLMTTQEQPTIFLALPSLSILQRPAH 76 N+G P +L + Q+ P L ++ +Q P H Sbjct: 50 NSGQQQPTTLASLQQSPFALHQLTAVQAIQHPTH 83 >AY113626-1|AAM29631.1| 163|Drosophila melanogaster RH70774p protein. Length = 163 Score = 25.8 bits (54), Expect = 8.2 Identities = 12/40 (30%), Positives = 22/40 (55%) Frame = +2 Query: 5 LVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKI 124 L++A C E+ I ++KVD+ KL G ++ +K+ Sbjct: 87 LLEAFCYENDIYVIKVDDATKLSRILGQDSVESCCLVQKV 126 >AY102665-1|AAM27494.1| 522|Drosophila melanogaster GH22474p protein. Length = 522 Score = 25.8 bits (54), Expect = 8.2 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = +2 Query: 20 CNEHQIPLVKVDNNKKLGEWAGLCKI 97 C EHQIPLV V + +L + GL K+ Sbjct: 471 CEEHQIPLVVVLGDAELAQ--GLVKL 494 >AY089591-1|AAL90329.1| 594|Drosophila melanogaster RE18459p protein. Length = 594 Score = 25.8 bits (54), Expect = 8.2 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = -3 Query: 214 LARRLEVVLEHIQRWSFLAEIFDDNTGAADNFPCL 110 LAR + +LE + R+ F ++ + G AD+F L Sbjct: 331 LARDIAALLERLSRFQFSRLLYVVDNGQADHFNAL 365 >AE014298-2736|AAF48856.1| 522|Drosophila melanogaster CG6335-PA, isoform A protein. Length = 522 Score = 25.8 bits (54), Expect = 8.2 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = +2 Query: 20 CNEHQIPLVKVDNNKKLGEWAGLCKI 97 C EHQIPLV V + +L + GL K+ Sbjct: 471 CEEHQIPLVVVLGDAELAQ--GLVKL 494 >AE014298-2735|AAN09471.1| 563|Drosophila melanogaster CG6335-PB, isoform B protein. Length = 563 Score = 25.8 bits (54), Expect = 8.2 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = +2 Query: 20 CNEHQIPLVKVDNNKKLGEWAGLCKI 97 C EHQIPLV V + +L + GL K+ Sbjct: 512 CEEHQIPLVVVLGDAELAQ--GLVKL 535 >AE014297-2780|AAF55756.1| 556|Drosophila melanogaster CG4360-PA protein. Length = 556 Score = 25.8 bits (54), Expect = 8.2 Identities = 10/34 (29%), Positives = 17/34 (50%) Frame = -1 Query: 177 NAGVSSPKSLMTTQEQPTIFLALPSLSILQRPAH 76 N+G P +L + Q+ P L ++ +Q P H Sbjct: 50 NSGQQQPTTLASLQQSPFALHQLTAVQAIQHPTH 83 >AE014297-662|AAF54156.2| 594|Drosophila melanogaster CG10092-PA protein. Length = 594 Score = 25.8 bits (54), Expect = 8.2 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = -3 Query: 214 LARRLEVVLEHIQRWSFLAEIFDDNTGAADNFPCL 110 LAR + +LE + R+ F ++ + G AD+F L Sbjct: 331 LARDIAALLERLSRFQFSRLLYVVDNGQADHFNAL 365 >AE013599-321|AAF59278.1| 163|Drosophila melanogaster CG11086-PA protein. Length = 163 Score = 25.8 bits (54), Expect = 8.2 Identities = 12/40 (30%), Positives = 22/40 (55%) Frame = +2 Query: 5 LVQALCNEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKI 124 L++A C E+ I ++KVD+ KL G ++ +K+ Sbjct: 87 LLEAFCYENDIYVIKVDDATKLSRILGQDSVESCCLVQKV 126 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,014,617 Number of Sequences: 53049 Number of extensions: 194733 Number of successful extensions: 656 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 647 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 656 length of database: 24,988,368 effective HSP length: 71 effective length of database: 21,221,889 effective search space used: 445659669 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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