Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1102
         (346 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   1.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   4.7  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   4.7  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    20   6.2  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +3

Query: 174 ISIVNALGIFVIFNRGAVLF*HTYIIQ**NKPVLFALGLSHC 299
           ISI   L I  +F    ++F   Y+    N+P+L+ +  S+C
Sbjct: 122 ISIFVNLAILGVFGEFVLVFVPDYVFFVENEPILYLI-FSYC 162


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 5/15 (33%), Positives = 13/15 (86%)
 Frame = +1

Query: 217 GVQCFFDIHILYNSK 261
           G+QC+ D +++++S+
Sbjct: 791 GLQCYIDRNVVFSSQ 805


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 214 IGVQCFFDIHILYN 255
           IG  CF+ + +LYN
Sbjct: 365 IGFNCFWVMKLLYN 378


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 20.2 bits (40), Expect = 6.2
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = -1

Query: 277 NNTGLFYYCIIY 242
           ++  +FYYC+ Y
Sbjct: 432 DDCSIFYYCLAY 443


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,162
Number of Sequences: 336
Number of extensions: 1453
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6770240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)