BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1098 (795 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_9272| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 5e-05 >SB_9272| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 664 Score = 45.6 bits (103), Expect = 5e-05 Identities = 17/25 (68%), Positives = 21/25 (84%) Frame = +1 Query: 1 HGWWYEGRLITVKYLRLERYMQRFP 75 HG W++GRL+ VKYL L+RY QRFP Sbjct: 601 HGCWFDGRLVAVKYLTLKRYHQRFP 625 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,149,574 Number of Sequences: 59808 Number of extensions: 351617 Number of successful extensions: 575 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 548 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 575 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2191792647 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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