Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1097
         (762 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...    95   3e-21
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   5.9  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            23   7.8  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score = 94.7 bits (225), Expect = 3e-21
 Identities = 47/98 (47%), Positives = 57/98 (58%)
 Frame = +3

Query: 258 GSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYAL 437
           GS++   KDKFQ+NLDVQ FSPEEISVK  D  ++V            Y+SR FVRRY L
Sbjct: 5   GSAVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRYML 64

Query: 438 PEGAAPETVESRLSSDGVLTITAPGRYPTPSRESERCP 551
           P+G     + S LSSDG+LTIT P +      E    P
Sbjct: 65  PKGHNEADIVSSLSSDGILTITCPRKEIEQKNEERSIP 102


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 496  PSPRQEGTRRRQGRAKGAHRTDRSRSQ 576
            PS   +GT RR+   +G   +D+S SQ
Sbjct: 1565 PSESAKGTTRRERSKQGRKVSDQSSSQ 1591


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 194 QATAASMSFGVSANPKS*STRRLGQWL*RTRG 99
           ++ A   S G  A PK+   + +G W   TRG
Sbjct: 139 RSMAGFRSLGSGAPPKAQGGKHVGNWEQHTRG 170


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 816,200
Number of Sequences: 2352
Number of extensions: 17850
Number of successful extensions: 92
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 92
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)