Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1097
(762 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 62 4e-10
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 62 4e-10
L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock pro... 60 2e-09
AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical ... 58 7e-09
Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical pr... 58 9e-09
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 57 2e-08
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 57 2e-08
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 57 2e-08
M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein ( C.ele... 57 2e-08
X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C. el... 54 1e-07
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 54 1e-07
K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock prot... 53 3e-07
Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical pr... 52 6e-07
EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock pr... 52 6e-07
Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical pr... 51 8e-07
X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal frag... 50 2e-06
U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock prot... 50 2e-06
U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock prot... 50 2e-06
K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock prot... 50 2e-06
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 49 3e-06
Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical p... 49 4e-06
Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical pr... 49 4e-06
K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock prot... 48 6e-06
Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical pr... 48 7e-06
U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock prot... 48 7e-06
U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock prot... 48 7e-06
U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock prot... 48 7e-06
K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock prot... 48 7e-06
M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein ( C.ele... 47 2e-05
AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock pr... 47 2e-05
Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical pr... 45 7e-05
Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical pr... 36 0.041
U00037-5|AAA50659.1| 235|Caenorhabditis elegans Hypothetical pr... 31 1.2
M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein. 30 2.1
Z70212-4|CAA94164.1| 322|Caenorhabditis elegans Hypothetical pr... 28 6.3
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 28 6.3
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 28 6.3
AC199158-8|ABO33283.1| 439|Caenorhabditis elegans Hypothetical ... 28 6.3
AC199158-4|ABO33286.1| 439|Caenorhabditis elegans Hypothetical ... 28 6.3
Z69902-1|CAA93767.1| 689|Caenorhabditis elegans Hypothetical pr... 28 8.3
L14324-3|AAA28185.1| 851|Caenorhabditis elegans Abnormal nucleo... 28 8.3
AF047027-1|AAC14263.1| 851|Caenorhabditis elegans B box zinc fi... 28 8.3
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 62.1 bits (144), Expect = 4e-10
Identities = 26/72 (36%), Positives = 41/72 (56%)
Frame = +3
Query: 285 KFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPETV 464
++ V++DV F PEE+ V D +++ + R FVR+Y LP G PE +
Sbjct: 56 EYNVSVDVSQFEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFVRKYNLPTGVRPEQI 115
Query: 465 ESRLSSDGVLTI 500
+S LS++GVLT+
Sbjct: 116 KSELSNNGVLTV 127
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 62.1 bits (144), Expect = 4e-10
Identities = 26/72 (36%), Positives = 41/72 (56%)
Frame = +3
Query: 285 KFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPETV 464
++ V++DV F PEE+ V D +++ + R FVR+Y LP G PE +
Sbjct: 55 EYNVSVDVSQFEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFVRKYNLPTGVRPEQI 114
Query: 465 ESRLSSDGVLTI 500
+S LS++GVLT+
Sbjct: 115 KSELSNNGVLTV 126
>L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock
protein protein 12.2 protein.
Length = 110
Score = 60.1 bits (139), Expect = 2e-09
Identities = 30/76 (39%), Positives = 45/76 (59%)
Frame = +3
Query: 279 KDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPE 458
K+KF+V LDVQ F+P+EI VK + +++ ++R+ R Y LP+
Sbjct: 31 KEKFEVGLDVQFFTPKEIEVKVSGQELLIHCRHETRSDNHGTVAREINRAYKLPDDVDVS 90
Query: 459 TVESRLSSDGVLTITA 506
TV+S L++ GVLTITA
Sbjct: 91 TVKSHLATRGVLTITA 106
>AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical
protein Y55F3BR.6 protein.
Length = 180
Score = 58.0 bits (134), Expect = 7e-09
Identities = 32/95 (33%), Positives = 47/95 (49%)
Frame = +3
Query: 261 SSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALP 440
+SI+ F LDV + + + V D I+V I F RR+ LP
Sbjct: 72 TSIRVTNTSFHAILDVSKYDADSLKVTVVDNNIIVEGSHGEKEDTYGTIESTFKRRFPLP 131
Query: 441 EGAAPETVESRLSSDGVLTITAPGRYPTPSRESER 545
+ APE+V+S+L++DG LTI A + P P +E R
Sbjct: 132 KAVAPESVQSQLTADGHLTIDA--KAPEPKQEGAR 164
>Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical
protein T22A3.2a protein.
Length = 109
Score = 57.6 bits (133), Expect = 9e-09
Identities = 30/75 (40%), Positives = 39/75 (52%)
Frame = +3
Query: 282 DKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPET 461
+KF+V LD F P +I VK I++ ++R+ R Y LPE P T
Sbjct: 32 EKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDNRPTEYGIVNREVHRTYKLPEDVDPST 91
Query: 462 VESRLSSDGVLTITA 506
V S L+S GVLTITA
Sbjct: 92 VRSHLNSSGVLTITA 106
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 56.8 bits (131), Expect = 2e-08
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = +3
Query: 270 KADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGA 449
++D ++ DV ++ PEE++VKT D ++V + R++ + + LP G
Sbjct: 22 ESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRT-VFREYNQEFLLPRGT 80
Query: 450 APETVESRLSSDGVLTITAP 509
PE + S LS+DGVLT+ AP
Sbjct: 81 NPEQISSTLSTDGVLTVEAP 100
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 56.8 bits (131), Expect = 2e-08
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = +3
Query: 270 KADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGA 449
++D ++ DV ++ PEE++VKT D ++V + R++ + + LP G
Sbjct: 119 ESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRT-VFREYNQEFLLPRGT 177
Query: 450 APETVESRLSSDGVLTITAP 509
PE + S LS+DGVLT+ AP
Sbjct: 178 NPEQISSTLSTDGVLTVEAP 197
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 56.8 bits (131), Expect = 2e-08
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = +3
Query: 270 KADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGA 449
++D ++ DV ++ PEE++VKT D ++V + R++ + + LP G
Sbjct: 133 ESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRT-VFREYNQEFLLPRGT 191
Query: 450 APETVESRLSSDGVLTITAP 509
PE + S LS+DGVLT+ AP
Sbjct: 192 NPEQISSTLSTDGVLTVEAP 211
>M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 144
Score = 56.8 bits (131), Expect = 2e-08
Identities = 31/85 (36%), Positives = 43/85 (50%)
Frame = +3
Query: 255 LGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYA 434
+G I D+ KF V LDV HF PE + +K DG + Y+ R F +
Sbjct: 44 IGEQIVNDESKFSVQLDVSHFKPENLKIK-LDGRELKIEGIQETKSEHGYLKRSFSKMIL 102
Query: 435 LPEGAAPETVESRLSSDGVLTITAP 509
LPE A +V+S +S++G L I AP
Sbjct: 103 LPEDADLPSVKSAISNEGKLQIEAP 127
>X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C.
elegans mRNA 3'-regionfor heat shock protein hsp 16-41
(exon 2).somal genes.).
Length = 97
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/78 (37%), Positives = 40/78 (51%)
Frame = +3
Query: 276 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 455
D+ KF V LDV HF PE + +K DG + Y+ R F + LPE A
Sbjct: 4 DESKFSVQLDVSHFKPENLKIK-LDGRELKIEGIQETKSEHGYLKRSFSKMILLPEDADL 62
Query: 456 ETVESRLSSDGVLTITAP 509
+V+S +S++G L I AP
Sbjct: 63 PSVKSAISNEGKLQIEAP 80
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/78 (37%), Positives = 40/78 (51%)
Frame = +3
Query: 276 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 455
D+ KF V LDV HF PE + +K DG + Y+ R F + LPE A
Sbjct: 50 DESKFSVQLDVSHFKPENLKIK-LDGRELKIEGIQETKSEHGYLKRSFSKMILLPEDADL 108
Query: 456 ETVESRLSSDGVLTITAP 509
+V+S +S++G L I AP
Sbjct: 109 PSVKSAISNEGKLQIEAP 126
>K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock protein
16-48a protein.
Length = 144
Score = 52.8 bits (121), Expect = 3e-07
Identities = 29/85 (34%), Positives = 42/85 (49%)
Frame = +3
Query: 255 LGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYA 434
+G I D+ KF V LDV HF PE++ ++ DG + Y R F +
Sbjct: 44 IGEQIVNDESKFSVQLDVSHFKPEDLKIE-LDGRELKIEGIQEKKSEHGYSKRSFSKMIL 102
Query: 435 LPEGAAPETVESRLSSDGVLTITAP 509
LPE +V+S +S++G L I AP
Sbjct: 103 LPEDVDLTSVKSAISNEGKLQIEAP 127
>Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical
protein T22A3.2b protein.
Length = 112
Score = 51.6 bits (118), Expect = 6e-07
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +3
Query: 282 DKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXX---YISRQFVRRYALPEGAA 452
+KF+V LD F P +I VK I++ ++R+ R Y LPE
Sbjct: 32 EKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDLLQNRPTEYGIVNREVHRTYKLPEDVD 91
Query: 453 PETVESRLSSDGVLTITA 506
P TV S L+S GVLTITA
Sbjct: 92 PSTVRSHLNSSGVLTITA 109
>EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock
protein 12.1 protein.
Length = 112
Score = 51.6 bits (118), Expect = 6e-07
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Frame = +3
Query: 282 DKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXX---YISRQFVRRYALPEGAA 452
+KF+V LD F P +I VK I++ ++R+ R Y LPE
Sbjct: 32 EKFEVGLDAGFFGPNDIDVKVNGIEIIIHLRHDLLQNRPTEYGIVNREVHRTYKLPEDVD 91
Query: 453 PETVESRLSSDGVLTITA 506
P TV S L+S GVLTITA
Sbjct: 92 PSTVRSHLNSSGVLTITA 109
>Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical
protein F38E11.1 protein.
Length = 109
Score = 51.2 bits (117), Expect = 8e-07
Identities = 24/75 (32%), Positives = 38/75 (50%)
Frame = +3
Query: 279 KDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPE 458
+D F+V L+ +F P EI VK ++ + I+R R Y LP+G P
Sbjct: 30 EDHFEVGLEAHNFLPNEIDVKNIGEFLEIHMAHTTKDDKFGSITRSITRCYRLPKGTDPA 89
Query: 459 TVESRLSSDGVLTIT 503
T++S+L G+L I+
Sbjct: 90 TIKSKLDGSGILHIS 104
>X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal
fragment of hsp 16-48 protein.
Length = 135
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/78 (34%), Positives = 39/78 (50%)
Frame = +3
Query: 276 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 455
D+ KF V LDV HF PE++ ++ DG + Y R F + LPE
Sbjct: 42 DESKFSVQLDVSHFKPEDLKIE-LDGRELKIEGIQEKKSEHGYSKRSFSKMILLPEDVDL 100
Query: 456 ETVESRLSSDGVLTITAP 509
+V+S +S++G L I AP
Sbjct: 101 TSVKSAISNEGKLQIEAP 118
>U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.49 protein.
Length = 143
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/78 (34%), Positives = 39/78 (50%)
Frame = +3
Query: 276 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 455
D+ KF V LDV HF PE++ ++ DG + Y R F + LPE
Sbjct: 50 DESKFSVQLDVSHFKPEDLKIE-LDGRELKIEGIQEKKSEHGYSKRSFSKMILLPEDVDL 108
Query: 456 ETVESRLSSDGVLTITAP 509
+V+S +S++G L I AP
Sbjct: 109 TSVKSAISNEGKLQIEAP 126
>U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.48 protein.
Length = 143
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/78 (34%), Positives = 39/78 (50%)
Frame = +3
Query: 276 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 455
D+ KF V LDV HF PE++ ++ DG + Y R F + LPE
Sbjct: 50 DESKFSVQLDVSHFKPEDLKIE-LDGRELKIEGIQEKKSEHGYSKRSFSKMILLPEDVDL 108
Query: 456 ETVESRLSSDGVLTITAP 509
+V+S +S++G L I AP
Sbjct: 109 TSVKSAISNEGKLQIEAP 126
>K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock protein
16-48 protein.
Length = 143
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/78 (34%), Positives = 39/78 (50%)
Frame = +3
Query: 276 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 455
D+ KF V LDV HF PE++ ++ DG + Y R F + LPE
Sbjct: 50 DESKFSVQLDVSHFKPEDLKIE-LDGRELKIEGIQEKKSEHGYSKRSFSKMILLPEDVDL 108
Query: 456 ETVESRLSSDGVLTITAP 509
+V+S +S++G L I AP
Sbjct: 109 TSVKSAISNEGKLQIEAP 126
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/84 (28%), Positives = 41/84 (48%)
Frame = +3
Query: 255 LGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYA 434
+ S++ D +F V++D F PEEI VKT D +++ + FVR+Y
Sbjct: 103 VNSNVVNDDRRFAVDMDCYQFRPEEIQVKTLDDTLMIEGRHEDIRDKDNFTKMYFVRKYQ 162
Query: 435 LPEGAAPETVESRLSSDGVLTITA 506
LP +++S + + G L + A
Sbjct: 163 LPRDVDFNSIQSSIDAKGRLQVEA 186
>Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/71 (32%), Positives = 36/71 (50%)
Frame = +3
Query: 288 FQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPETVE 467
F + +DV HF PEEI V D + + + R F R+Y++P+ +T+
Sbjct: 104 FTIEIDVFHFMPEEIKVVLTDDTLSISGERFESTGDGHTLRRSFSRKYSIPDDVHLDTIR 163
Query: 468 SRLSSDGVLTI 500
S L++ GVL I
Sbjct: 164 SHLTNSGVLII 174
>Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/71 (32%), Positives = 36/71 (50%)
Frame = +3
Query: 288 FQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPETVE 467
F + +DV HF PEEI V D + + + R F R+Y++P+ +T+
Sbjct: 104 FTIEIDVFHFMPEEIKVVLTDDTLSISGERFESTGDGHTLRRSFSRKYSIPDDVHLDTIR 163
Query: 468 SRLSSDGVLTI 500
S L++ GVL I
Sbjct: 164 SHLTNSGVLII 174
>K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock protein
16-1 protein.
Length = 146
Score = 48.4 bits (110), Expect = 6e-06
Identities = 30/91 (32%), Positives = 40/91 (43%)
Frame = +3
Query: 237 RGCIS*LGSSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQ 416
RG S I + KF +NL+V F PE++ + DG+ + Y +
Sbjct: 34 RGSPSESSEQIVNNDQKFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEHGYSKKS 92
Query: 417 FVRRYALPEGAAPETVESRLSSDGVLTITAP 509
F R LPE V S LS DG L+I AP
Sbjct: 93 FSRVILLPEDVDVGAVASNLSEDGKLSIEAP 123
>Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical
protein F38E11.2 protein.
Length = 110
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = +3
Query: 276 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 455
D D F+V L+ +F P+EI VK + + +SR R Y LP+
Sbjct: 30 DDDHFEVGLEAHNFLPKEIEVKNIGELLEIHMEHNVKKDSFGDVSRNITRCYKLPKNVDM 89
Query: 456 ETVESRLSSDGVLTITA 506
+T++S L S G+L I A
Sbjct: 90 KTIKSNLDSHGILHIEA 106
>U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock protein
12.6 protein.
Length = 110
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = +3
Query: 276 DKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAP 455
D D F+V L+ +F P+EI VK + + +SR R Y LP+
Sbjct: 30 DDDHFEVGLEAHNFLPKEIEVKNIGELLEIHMEHNVKKDSFGDVSRNITRCYKLPKNVDM 89
Query: 456 ETVESRLSSDGVLTITA 506
+T++S L S G+L I A
Sbjct: 90 KTIKSNLDSHGILHIEA 106
>U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.11 protein.
Length = 145
Score = 48.0 bits (109), Expect = 7e-06
Identities = 28/83 (33%), Positives = 38/83 (45%)
Frame = +3
Query: 261 SSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALP 440
S I + KF +NL+V F PE++ + DG+ + Y + F R LP
Sbjct: 41 SEIVNNDQKFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEHGYSKKSFSRVILLP 99
Query: 441 EGAAPETVESRLSSDGVLTITAP 509
E V S LS DG L+I AP
Sbjct: 100 EDVDVGAVASNLSEDGKLSIEAP 122
>U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.1 protein.
Length = 145
Score = 48.0 bits (109), Expect = 7e-06
Identities = 28/83 (33%), Positives = 38/83 (45%)
Frame = +3
Query: 261 SSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALP 440
S I + KF +NL+V F PE++ + DG+ + Y + F R LP
Sbjct: 41 SEIVNNDQKFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEHGYSKKSFSRVILLP 99
Query: 441 EGAAPETVESRLSSDGVLTITAP 509
E V S LS DG L+I AP
Sbjct: 100 EDVDVGAVASNLSEDGKLSIEAP 122
>K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock protein
16-1a protein.
Length = 145
Score = 48.0 bits (109), Expect = 7e-06
Identities = 28/83 (33%), Positives = 38/83 (45%)
Frame = +3
Query: 261 SSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALP 440
S I + KF +NL+V F PE++ + DG+ + Y + F R LP
Sbjct: 41 SEIVNNDQKFAINLNVSQFKPEDLKINL-DGHTLSIQGEQELKTEHGYSKKSFSRVILLP 99
Query: 441 EGAAPETVESRLSSDGVLTITAP 509
E V S LS DG L+I AP
Sbjct: 100 EDVDVGAVASNLSEDGKLSIEAP 122
>M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 145
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/91 (31%), Positives = 39/91 (42%)
Frame = +3
Query: 261 SSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALP 440
S I + KF +NL+V F PE++ + DG + Y + F R LP
Sbjct: 41 SEIVNNDQKFAINLNVSQFKPEDLKINL-DGRTLSIQGEQELKTDHGYSKKSFSRVILLP 99
Query: 441 EGAAPETVESRLSSDGVLTITAPGRYPTPSR 533
E V S LS DG L+I AP + R
Sbjct: 100 EDVDVGAVASNLSEDGKLSIEAPKKEAVQGR 130
>AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock
protein protein 16.2 protein.
Length = 145
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/91 (31%), Positives = 39/91 (42%)
Frame = +3
Query: 261 SSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALP 440
S I + KF +NL+V F PE++ + DG + Y + F R LP
Sbjct: 41 SEIVNNDQKFAINLNVSQFKPEDLKINL-DGRTLSIQGEQELKTDHGYSKKSFSRVILLP 99
Query: 441 EGAAPETVESRLSSDGVLTITAPGRYPTPSR 533
E V S LS DG L+I AP + R
Sbjct: 100 EDVDVGAVASNLSEDGKLSIEAPKKEAVQGR 130
>Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.4 protein.
Length = 147
Score = 44.8 bits (101), Expect = 7e-05
Identities = 29/83 (34%), Positives = 38/83 (45%)
Frame = +3
Query: 261 SSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALP 440
S I DKF VNL+V +F PEE+ V +G + + F R LP
Sbjct: 43 SEIMNSNDKFAVNLNVSNFKPEELKV-NLEGRQLSIQGEHDVENEHGASRKSFSRMILLP 101
Query: 441 EGAAPETVESRLSSDGVLTITAP 509
E +V + LS+DG L I AP
Sbjct: 102 EDVDITSVATNLSNDGKLCIEAP 124
>Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical
protein F43D9.4 protein.
Length = 159
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/83 (26%), Positives = 40/83 (48%)
Frame = +3
Query: 261 SSIKADKDKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALP 440
+ ++ KF V LDV F PEE+ V +G+++ + R F R++ LP
Sbjct: 44 NEVENTAQKFCVKLDVAAFKPEELKV-NLEGHVLTIEGHHEVKTEHGFSKRSFTRQFTLP 102
Query: 441 EGAAPETVESRLSSDGVLTITAP 509
+ + + ++ +G +TI AP
Sbjct: 103 KDVDLAHIHTVINKEGQMTIDAP 125
>Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.3 protein.
Length = 147
Score = 35.5 bits (78), Expect = 0.041
Identities = 20/76 (26%), Positives = 31/76 (40%)
Frame = +3
Query: 282 DKFQVNLDVQHFSPEEISVKTADGYIVVXXXXXXXXXXXXYISRQFVRRYALPEGAAPET 461
+KF VNL+V PEE+ + + + ++ + + LPE
Sbjct: 49 EKFSVNLNVPDVKPEELKINLEGRKLSIKAEHQEIENDNISTTQTYSKSIVLPEDVDVTH 108
Query: 462 VESRLSSDGVLTITAP 509
+ S LS DG L I P
Sbjct: 109 LSSNLSEDGKLLIEVP 124
>U00037-5|AAA50659.1| 235|Caenorhabditis elegans Hypothetical
protein T20H4.2 protein.
Length = 235
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = +1
Query: 415 SSSDVTRCLKARRLRLWNRDCHQTGFSPSPRQEGTRRRQGRAKGAHRTD 561
SS++ +RC RR + R H+ S S + TRRRQ +G R D
Sbjct: 88 SSNNRSRCRDRRRRTDYGRRRHRNSDSRSHERWSTRRRQTTPEGNFRCD 136
>M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein.
Length = 22
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 276 DKDKFQVNLDVQHFSPEE 329
D+ KF V LDV HF PE+
Sbjct: 5 DESKFSVQLDVSHFKPED 22
>Z70212-4|CAA94164.1| 322|Caenorhabditis elegans Hypothetical
protein R04D3.6 protein.
Length = 322
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +2
Query: 23 TFLCVLPYLFKYNQICLFYHSCWVTG 100
T CVLPY+F Y I Y+ C +TG
Sbjct: 243 TIQCVLPYVF-YIPIYTLYYYCLLTG 267
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 28.3 bits (60), Expect = 6.3
Identities = 28/113 (24%), Positives = 44/113 (38%), Gaps = 4/113 (3%)
Frame = +1
Query: 271 RPTRTSSKSIWTCSTSRRKRFR*RLPMGTSWWKAST----KRRKTSTGIFQGSSSDVTRC 438
R T T S+S+ + S + R++ R P S + S K R T T SSS ++ C
Sbjct: 933 RDTPTGSRSMRSTSPNDRRKSRETPPGNRSMRRTSPSDGRKSRDTPTASSSMSSSTLSYC 992
Query: 439 LKARRLRLWNRDCHQTGFSPSPRQEGTRRRQGRAKGAHRTDRSRSQGDQGPER 597
K++ + + Q + R TR K + + S G R
Sbjct: 993 KKSKETPMSYEEIEQQKKAKRQRNCKTREENRERKRLAQLEELESSETTGVRR 1045
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 28.3 bits (60), Expect = 6.3
Identities = 28/113 (24%), Positives = 44/113 (38%), Gaps = 4/113 (3%)
Frame = +1
Query: 271 RPTRTSSKSIWTCSTSRRKRFR*RLPMGTSWWKAST----KRRKTSTGIFQGSSSDVTRC 438
R T T S+S+ + S + R++ R P S + S K R T T SSS ++ C
Sbjct: 933 RDTPTGSRSMRSTSPNDRRKSRETPPGNRSMRRTSPSDGRKSRDTPTASSSMSSSTLSYC 992
Query: 439 LKARRLRLWNRDCHQTGFSPSPRQEGTRRRQGRAKGAHRTDRSRSQGDQGPER 597
K++ + + Q + R TR K + + S G R
Sbjct: 993 KKSKETPMSYEEIEQQKKAKRQRNCKTREENRERKRLAQLEELESSETTGVRR 1045
>AC199158-8|ABO33283.1| 439|Caenorhabditis elegans Hypothetical
protein AC8.10 protein.
Length = 439
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Frame = +2
Query: 464 GIATVIRRGSHHHRARKVPDAVKGERKVPIAQTGPVRKEIKD-----QSEGTQDAENK*G 628
G+ V+ HH +++ +A + R + TGP +D QS+ +
Sbjct: 146 GVRQVMEERGHHISTKQIQNAARSVRDAVVGNTGPHLSTTEDMLKALQSQNPDRVKYWID 205
Query: 629 GFAMVHFNLF 658
+HFN+F
Sbjct: 206 AKQQLHFNIF 215
>AC199158-4|ABO33286.1| 439|Caenorhabditis elegans Hypothetical
protein AC8.3 protein.
Length = 439
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Frame = +2
Query: 464 GIATVIRRGSHHHRARKVPDAVKGERKVPIAQTGPVRKEIKD-----QSEGTQDAENK*G 628
G+ V+ HH +++ +A + R + TGP +D QS+ +
Sbjct: 146 GVRQVMEERGHHISTKQIQNAARSVRDAVVGNTGPHLSTTEDMLKALQSQNPDRVKYWID 205
Query: 629 GFAMVHFNLF 658
+HFN+F
Sbjct: 206 AKQQLHFNIF 215
>Z69902-1|CAA93767.1| 689|Caenorhabditis elegans Hypothetical
protein C47D12.2 protein.
Length = 689
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Frame = -1
Query: 681 SLTQTILWNKL------KCTIAKPPYLFSASWVPSLWSLISLRTGPVCAMGTFRSPLT 526
SLT+T+L N L T+ KP S+WS++ + TG A + PLT
Sbjct: 244 SLTKTLLLNYLIHNSEYHMTVQKPQESIVFGLASSMWSMVQMATGIDSAEEEKKPPLT 301
>L14324-3|AAA28185.1| 851|Caenorhabditis elegans Abnormal nucleoli
protein 1 protein.
Length = 851
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -1
Query: 153 SKILINKTTGPVVVTNAGPVTQHEW*KRHIWLYLNRYGKTQRKVRLNASQ 4
+++ +N+TTG VVT P Q I +Y N+YG+ RK N Q
Sbjct: 637 NRVAVNRTTGDFVVTERSPTHQ-------IQVY-NQYGQFLRKFGANILQ 678
>AF047027-1|AAC14263.1| 851|Caenorhabditis elegans B box zinc
finger protein Ncl-1 protein.
Length = 851
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -1
Query: 153 SKILINKTTGPVVVTNAGPVTQHEW*KRHIWLYLNRYGKTQRKVRLNASQ 4
+++ +N+TTG VVT P Q I +Y N+YG+ RK N Q
Sbjct: 637 NRVAVNRTTGDFVVTERSPTHQ-------IQVY-NQYGQFLRKFGANILQ 678
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,729,088
Number of Sequences: 27780
Number of extensions: 385883
Number of successful extensions: 1245
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1229
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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