Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1096
         (419 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1006 + 8528508-8529285,8529376-8529544,8530179-8530445,853...    29   1.5  
07_01_0766 - 5885207-5885791,5885874-5886224,5886252-5886269,588...    28   3.5  
07_03_0123 - 13688562-13689146,13689233-13689583,13689665-136898...    27   6.1  
03_06_0596 + 34964109-34964189,34964286-34964481,34964567-349647...    27   6.1  
03_06_0389 - 33567385-33567969,33568052-33568402,33568646-335688...    27   6.1  
03_06_0259 + 32712976-32714335,32714454-32714587,32714904-327151...    27   6.1  

>07_01_1006 + 8528508-8529285,8529376-8529544,8530179-8530445,
            8530533-8530878,8530964-8531101,8531197-8531322,
            8531422-8531634,8531721-8531863,8531891-8532009,
            8532099-8532295,8532379-8532729,8532811-8533395
          Length = 1143

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -1

Query: 158  WFLTKFVTTFLPSLFEMRVSGVII 87
            WF++ F+  F+  + EMR SGV I
Sbjct: 957  WFMSLFICIFVTGILEMRWSGVAI 980


>07_01_0766 -
           5885207-5885791,5885874-5886224,5886252-5886269,
           5886339-5886541,5886632-5886890,5887052-5887264,
           5887357-5887482,5887590-5887727,5887817-5888162,
           5888254-5888520,5888983-5889172,5889264-5889363,
           5889444-5889694,5889990-5890182,5890313-5890336
          Length = 1087

 Score = 27.9 bits (59), Expect = 3.5
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 158 WFLTKFVTTFLPSLFEMRVSGV 93
           WF++ F++ F   + EMR SGV
Sbjct: 901 WFISLFISIFATGILEMRWSGV 922


>07_03_0123 -
           13688562-13689146,13689233-13689583,13689665-13689861,
           13689954-13690072,13690103-13690245,13690332-13690544,
           13690649-13690774,13690891-13691028,13691109-13691454,
           13691532-13691798,13691939-13691983,13692148-13692349,
           13692405-13692507,13692599-13692810,13692891-13693113,
           13693211-13693291
          Length = 1116

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 158 WFLTKFVTTFLPSLFEMRVSGV 93
           WF++ F+  F   + EMR SGV
Sbjct: 930 WFMSLFICIFATGILEMRWSGV 951


>03_06_0596 +
           34964109-34964189,34964286-34964481,34964567-34964775,
           34964868-34964970,34965053-34965227,34965617-34965883,
           34965966-34966311,34966396-34966533,34966645-34966770,
           34966866-34967078,34967171-34967462,34967559-34967755,
           34967844-34968194,34968290-34968874
          Length = 1092

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 158 WFLTKFVTTFLPSLFEMRVSGV 93
           WF++ F+  F   + EMR SGV
Sbjct: 906 WFMSLFICIFATGILEMRWSGV 927


>03_06_0389 -
           33567385-33567969,33568052-33568402,33568646-33568848,
           33569044-33569299,33569459-33569671,33569757-33569882,
           33569965-33570102,33570191-33570536,33570630-33570896,
           33571192-33571378,33571457-33571556,33571659-33571909,
           33572242-33572428,33572562-33572573
          Length = 1073

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 158 WFLTKFVTTFLPSLFEMRVSGV 93
           WF++ F++ F   + EMR SGV
Sbjct: 887 WFISLFLSIFATGILEMRWSGV 908


>03_06_0259 +
           32712976-32714335,32714454-32714587,32714904-32715144,
           32715254-32715462,32715522-32715583,32715690-32715801,
           32715916-32716208,32716400-32716520
          Length = 843

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +1

Query: 121 LGRNVVTNFV-RNHSNGGIPGENLPFDIHNR 210
           LGR VVT  + RN   GG+PGE   F +  R
Sbjct: 244 LGRKVVTVVLSRNRFTGGLPGEITSFYLLER 274


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,037,491
Number of Sequences: 37544
Number of extensions: 192271
Number of successful extensions: 365
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 365
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 766563072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)