Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1096
         (419 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    22   7.9  
AJ237664-1|CAB40379.2|   81|Anopheles gambiae putative infection...    22   7.9  

>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 166 GGIPGENLPFDIHNRY 213
           G +   NLP  IHN Y
Sbjct: 530 GSLDFSNLPLSIHNSY 545


>AJ237664-1|CAB40379.2|   81|Anopheles gambiae putative infection
           responsive shortpeptide protein.
          Length = 81

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 9/34 (26%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = -2

Query: 130 FYPVCLKCESVG*SSLRF-YDSRVGITAKNRNSI 32
           + P C +C+S+G     + Y +R G++   + +I
Sbjct: 25  YAPTCARCKSIGARYCGYGYLNRKGVSCDGQTTI 58


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 410,870
Number of Sequences: 2352
Number of extensions: 8129
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34632603
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)