Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1096
(419 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF136170-1|AAP97260.1| 63|Homo sapiens cytochrome c oxidase VI... 38 0.010
X16560-1|CAA34559.1| 63|Homo sapiens protein ( Human COX VIIc ... 36 0.055
BT007098-1|AAP35762.1| 63|Homo sapiens cytochrome c oxidase su... 36 0.055
BC007498-1|AAH07498.1| 63|Homo sapiens cytochrome c oxidase su... 36 0.055
BC001005-1|AAH01005.1| 63|Homo sapiens cytochrome c oxidase su... 36 0.055
AF067639-1|AAC73062.1| 63|Homo sapiens cytochrome c oxidase su... 36 0.055
BC104924-1|AAI04925.1| 333|Homo sapiens G protein-coupled recep... 31 1.6
BC104922-1|AAI04923.1| 333|Homo sapiens putative purinergic rec... 31 1.6
AY242133-1|AAO92300.1| 333|Homo sapiens putative purinergic rec... 31 1.6
AL590222-1|CAD13458.1| 333|Homo sapiens G protein-coupled recep... 31 1.6
AB083599-1|BAB89312.1| 333|Homo sapiens putative G-protein coup... 31 1.6
>AF136170-1|AAP97260.1| 63|Homo sapiens cytochrome c oxidase VIIc
protein.
Length = 63
Score = 38.3 bits (85), Expect = 0.010
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 127 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLQHP 264
R T+ VR +H G PG+NLPF + N+++L +Y GSG P
Sbjct: 7 RRFTTSVVRRSHYEEG-PGKNLPFSVENKWRLLAMMTVYFGSGFAAP 52
>X16560-1|CAA34559.1| 63|Homo sapiens protein ( Human COX VIIc
gene for subunit VIIc of cytochrome c oxidase (EC
1.9.3.1). ).
Length = 63
Score = 35.9 bits (79), Expect = 0.055
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 127 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLQHP 264
R T+ VR +H G PG+NLPF + N++ L LY GS P
Sbjct: 7 RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATP 52
>BT007098-1|AAP35762.1| 63|Homo sapiens cytochrome c oxidase
subunit VIIc protein.
Length = 63
Score = 35.9 bits (79), Expect = 0.055
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 127 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLQHP 264
R T+ VR +H G PG+NLPF + N++ L LY GS P
Sbjct: 7 RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATP 52
>BC007498-1|AAH07498.1| 63|Homo sapiens cytochrome c oxidase
subunit VIIc protein.
Length = 63
Score = 35.9 bits (79), Expect = 0.055
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 127 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLQHP 264
R T+ VR +H G PG+NLPF + N++ L LY GS P
Sbjct: 7 RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATP 52
>BC001005-1|AAH01005.1| 63|Homo sapiens cytochrome c oxidase
subunit VIIc protein.
Length = 63
Score = 35.9 bits (79), Expect = 0.055
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 127 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLQHP 264
R T+ VR +H G PG+NLPF + N++ L LY GS P
Sbjct: 7 RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATP 52
>AF067639-1|AAC73062.1| 63|Homo sapiens cytochrome c oxidase
subunit VIIc precursor protein.
Length = 63
Score = 35.9 bits (79), Expect = 0.055
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 127 RNVVTNFVR-NHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLQHP 264
R T+ VR +H G PG+NLPF + N++ L LY GS P
Sbjct: 7 RRFTTSVVRRSHYEEG-PGKNLPFSVENKWSLLAKMCLYFGSAFATP 52
>BC104924-1|AAI04925.1| 333|Homo sapiens G protein-coupled receptor
174 protein.
Length = 333
Score = 31.1 bits (67), Expect = 1.6
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = -1
Query: 185 FSPGIPPLEWFLTKFVTTFLPSLFEMRVSGVIIFTFLRFSSRYHSKKQKFDFANSTVG 12
F PG+ ++L K+V + F + +S V F FL + R+H KQK+D S G
Sbjct: 86 FGPGLCMFCFYL-KYVNMYASIYFLVCIS-VRRFWFLMYPFRFHDCKQKYDLYISIAG 141
>BC104922-1|AAI04923.1| 333|Homo sapiens putative purinergic
receptor FKSG79 protein.
Length = 333
Score = 31.1 bits (67), Expect = 1.6
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = -1
Query: 185 FSPGIPPLEWFLTKFVTTFLPSLFEMRVSGVIIFTFLRFSSRYHSKKQKFDFANSTVG 12
F PG+ ++L K+V + F + +S V F FL + R+H KQK+D S G
Sbjct: 86 FGPGLCMFCFYL-KYVNMYASIYFLVCIS-VRRFWFLMYPFRFHDCKQKYDLYISIAG 141
>AY242133-1|AAO92300.1| 333|Homo sapiens putative purinergic
receptor protein.
Length = 333
Score = 31.1 bits (67), Expect = 1.6
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = -1
Query: 185 FSPGIPPLEWFLTKFVTTFLPSLFEMRVSGVIIFTFLRFSSRYHSKKQKFDFANSTVG 12
F PG+ ++L K+V + F + +S V F FL + R+H KQK+D S G
Sbjct: 86 FGPGLCMFCFYL-KYVNMYASIYFLVCIS-VRRFWFLMYPFRFHDCKQKYDLYISIAG 141
>AL590222-1|CAD13458.1| 333|Homo sapiens G protein-coupled receptor
174 protein.
Length = 333
Score = 31.1 bits (67), Expect = 1.6
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = -1
Query: 185 FSPGIPPLEWFLTKFVTTFLPSLFEMRVSGVIIFTFLRFSSRYHSKKQKFDFANSTVG 12
F PG+ ++L K+V + F + +S V F FL + R+H KQK+D S G
Sbjct: 86 FGPGLCMFCFYL-KYVNMYASIYFLVCIS-VRRFWFLMYPFRFHDCKQKYDLYISIAG 141
>AB083599-1|BAB89312.1| 333|Homo sapiens putative G-protein coupled
receptor protein.
Length = 333
Score = 31.1 bits (67), Expect = 1.6
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = -1
Query: 185 FSPGIPPLEWFLTKFVTTFLPSLFEMRVSGVIIFTFLRFSSRYHSKKQKFDFANSTVG 12
F PG+ ++L K+V + F + +S V F FL + R+H KQK+D S G
Sbjct: 86 FGPGLCMFCFYL-KYVNMYASIYFLVCIS-VRRFWFLMYPFRFHDCKQKYDLYISIAG 141
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,868,247
Number of Sequences: 237096
Number of extensions: 1080296
Number of successful extensions: 1660
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1660
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3202085264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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