Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1096
(419 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118515-1|AAM49884.1| 66|Drosophila melanogaster LD14731p pro... 46 2e-05
AE013599-996|AAO41466.1| 66|Drosophila melanogaster CG2249-PB,... 46 2e-05
AE013599-995|AAF58857.2| 66|Drosophila melanogaster CG2249-PA,... 46 2e-05
AY070602-1|AAL48073.1| 362|Drosophila melanogaster RE70413p pro... 32 0.36
AE013599-3482|AAF46910.2| 485|Drosophila melanogaster CG9825-PA... 32 0.36
AE013599-3481|AAF46909.2| 467|Drosophila melanogaster CG12490-P... 30 1.1
AE013599-3480|AAF46908.2| 485|Drosophila melanogaster CG30265-P... 29 3.3
AY071655-1|AAL49277.1| 485|Drosophila melanogaster RE73545p pro... 28 4.4
AY061373-1|AAL28921.1| 1205|Drosophila melanogaster LD29485p pro... 28 5.8
AE014296-340|AAF47556.1| 1205|Drosophila melanogaster CG2069-PA ... 28 5.8
>AY118515-1|AAM49884.1| 66|Drosophila melanogaster LD14731p
protein.
Length = 66
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +1
Query: 112 SNKLGRNVVTNFVRNHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLQHP 264
S+ + RN + VR +GG+PGENLPF + N+Y++T F + G P
Sbjct: 5 SSVIARNFSQSMVRFSGHGGVPGENLPFGLTNKYRITALFTIGCVLGFGSP 55
>AE013599-996|AAO41466.1| 66|Drosophila melanogaster CG2249-PB,
isoform B protein.
Length = 66
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +1
Query: 112 SNKLGRNVVTNFVRNHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLQHP 264
S+ + RN + VR +GG+PGENLPF + N+Y++T F + G P
Sbjct: 5 SSVIARNFSQSMVRFSGHGGVPGENLPFGLTNKYRITALFTIGCVLGFGSP 55
>AE013599-995|AAF58857.2| 66|Drosophila melanogaster CG2249-PA,
isoform A protein.
Length = 66
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +1
Query: 112 SNKLGRNVVTNFVRNHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLQHP 264
S+ + RN + VR +GG+PGENLPF + N+Y++T F + G P
Sbjct: 5 SSVIARNFSQSMVRFSGHGGVPGENLPFGLTNKYRITALFTIGCVLGFGSP 55
>AY070602-1|AAL48073.1| 362|Drosophila melanogaster RE70413p
protein.
Length = 362
Score = 31.9 bits (69), Expect = 0.36
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 183 ESTLRHSQPLQADIVFHPICGLWTSAPYL 269
ES+L+H++ A I+ P +WTSAP+L
Sbjct: 223 ESSLKHNESYHATIIPIPWKAIWTSAPFL 251
>AE013599-3482|AAF46910.2| 485|Drosophila melanogaster CG9825-PA
protein.
Length = 485
Score = 31.9 bits (69), Expect = 0.36
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 183 ESTLRHSQPLQADIVFHPICGLWTSAPYL 269
ES+L+H++ A I+ P +WTSAP+L
Sbjct: 223 ESSLKHNESYHATIIPIPWKAIWTSAPFL 251
>AE013599-3481|AAF46909.2| 467|Drosophila melanogaster CG12490-PA
protein.
Length = 467
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 183 ESTLRHSQPLQADIVFHPICGLWTSAPYL 269
ES+L+H++ ++ P +WTSAP+L
Sbjct: 211 ESSLKHNEDYHKTVIPVPWMAIWTSAPFL 239
>AE013599-3480|AAF46908.2| 485|Drosophila melanogaster CG30265-PA
protein.
Length = 485
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 183 ESTLRHSQPLQADIVFHPICGLWTSAPY 266
ES+L+H++ ++ P +WTSAP+
Sbjct: 223 ESSLKHNEDYHKTVIPVPWMAIWTSAPF 250
>AY071655-1|AAL49277.1| 485|Drosophila melanogaster RE73545p
protein.
Length = 485
Score = 28.3 bits (60), Expect = 4.4
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +3
Query: 183 ESTLRHSQPLQADIVFHPICGLWTSAPY 266
ES+L+H++ ++ P +WTSAP+
Sbjct: 223 ESSLQHNEDYHKTVIPVPWMAIWTSAPF 250
>AY061373-1|AAL28921.1| 1205|Drosophila melanogaster LD29485p
protein.
Length = 1205
Score = 27.9 bits (59), Expect = 5.8
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Frame = +2
Query: 155 TILTAVFLARIYPSTFTTVTS*HCI------SSYMRALDFSTLSHHPSPASEEVIQAAEI 316
T+ FL + P+ +S HC+ SS ++ + STL + +PA + V Q +
Sbjct: 373 TVSNQSFLKEVEPTLCLASSSEHCVLGVECVSSNIKEIALSTLENRSNPADDRVYQL--L 430
Query: 317 LC 322
LC
Sbjct: 431 LC 432
>AE014296-340|AAF47556.1| 1205|Drosophila melanogaster CG2069-PA
protein.
Length = 1205
Score = 27.9 bits (59), Expect = 5.8
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Frame = +2
Query: 155 TILTAVFLARIYPSTFTTVTS*HCI------SSYMRALDFSTLSHHPSPASEEVIQAAEI 316
T+ FL + P+ +S HC+ SS ++ + STL + +PA + V Q +
Sbjct: 373 TVSNQSFLKEVEPTLCLASSSEHCVLGVECVSSNIKEIALSTLENRSNPADDRVYQL--L 430
Query: 317 LC 322
LC
Sbjct: 431 LC 432
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,258,206
Number of Sequences: 53049
Number of extensions: 345460
Number of successful extensions: 643
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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