BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1096 (419 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 1.8 AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 1.8 AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 22 2.4 AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 22 3.2 U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 21 4.3 AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 21 4.3 >AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule AbsCAM-Ig7B protein. Length = 1923 Score = 22.6 bits (46), Expect = 1.8 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = -1 Query: 182 SPGIPPLEWFLTKFVTTFLPSLFEMRVSGVIIFTF 78 +PGIPP FL+ TT + L +G I F Sbjct: 1498 APGIPPAATFLSPNSTTLVLRLHVWPDNGCPILYF 1532 >AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member AbsCAM-Ig7A protein. Length = 1919 Score = 22.6 bits (46), Expect = 1.8 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = -1 Query: 182 SPGIPPLEWFLTKFVTTFLPSLFEMRVSGVIIFTF 78 +PGIPP FL+ TT + L +G I F Sbjct: 1494 APGIPPAATFLSPNSTTLVLRLHVWPDNGCPILYF 1528 >AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive opsin protein. Length = 371 Score = 22.2 bits (45), Expect = 2.4 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = -1 Query: 191 GRFSPGIPPLEWFLTKFVTTFLPSLFEMRVSGVIIFTF 78 GRF P E FLT +L E+R+ IFTF Sbjct: 186 GRFVP-----EGFLTSCSFDYLTDTNEIRIFVATIFTF 218 >AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. Length = 493 Score = 21.8 bits (44), Expect = 3.2 Identities = 13/43 (30%), Positives = 19/43 (44%) Frame = +1 Query: 145 FVRNHSNGGIPGENLPFDIHNRYKLTLYFILYAGSGLQHPISS 273 FV NH + L + RYK+ + F+L G +SS Sbjct: 304 FVDNHDTQRDNPQILTYKYSKRYKMAVAFMLSHPFGTPRIMSS 346 >U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive opsin protein. Length = 377 Score = 21.4 bits (43), Expect = 4.3 Identities = 11/34 (32%), Positives = 18/34 (52%) Frame = -1 Query: 140 VTTFLPSLFEMRVSGVIIFTFLRFSSRYHSKKQK 39 V+T LP++F VS + + + RY + QK Sbjct: 316 VSTMLPAVFAKTVSCIDPWIYAINHPRYRQELQK 349 >AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin protein. Length = 377 Score = 21.4 bits (43), Expect = 4.3 Identities = 11/34 (32%), Positives = 18/34 (52%) Frame = -1 Query: 140 VTTFLPSLFEMRVSGVIIFTFLRFSSRYHSKKQK 39 V+T LP++F VS + + + RY + QK Sbjct: 316 VSTMLPAVFAKTVSCIDPWIYAINHPRYRQELQK 349 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 112,132 Number of Sequences: 438 Number of extensions: 2171 Number of successful extensions: 6 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6 length of database: 146,343 effective HSP length: 52 effective length of database: 123,567 effective search space used: 10750329 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.2 bits)
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