Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1095X
(462 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P18621 Cluster: 60S ribosomal protein L17; n=135; Eukar... 135 4e-31
UniRef50_Q9BL19 Cluster: Ribosomal protein, large subunit protei... 125 4e-28
UniRef50_Q5DHE6 Cluster: SJCHGC09296 protein; n=5; Bilateria|Rep... 115 4e-25
UniRef50_Q7RR03 Cluster: Ribosomal protein L22; n=1; Plasmodium ... 113 2e-24
UniRef50_Q8IDI5 Cluster: Ribosomal protein L17, putative; n=5; P... 112 3e-24
UniRef50_Q93VI3 Cluster: 60S ribosomal protein L17-1; n=18; Euka... 108 5e-23
UniRef50_O48557 Cluster: 60S ribosomal protein L17; n=53; Eukary... 104 8e-22
UniRef50_A7QP86 Cluster: Chromosome chr1 scaffold_136, whole gen... 103 1e-21
UniRef50_Q8WTK4 Cluster: Ribosomal protein, large subunit protei... 103 1e-21
UniRef50_Q5CVN1 Cluster: 60S ribosomal protein L17; n=9; Eukaryo... 101 8e-21
UniRef50_O14339 Cluster: 60S ribosomal protein L17-A; n=4; Dikar... 101 8e-21
UniRef50_P05740 Cluster: 60S ribosomal protein L17-A; n=27; Euka... 96 3e-19
UniRef50_Q7TPJ7 Cluster: Ac2-210; n=3; Eutheria|Rep: Ac2-210 - R... 92 5e-18
UniRef50_A1XED3 Cluster: RPL17; n=14; Eutheria|Rep: RPL17 - Bos ... 88 1e-16
UniRef50_A4D1R6 Cluster: Similar to 60S ribosomal protein L17; n... 83 2e-15
UniRef50_A4D1R5 Cluster: Similar to Ubiquinol-cytochrome C reduc... 83 2e-15
UniRef50_Q7QWE4 Cluster: GLP_336_28895_29389; n=1; Giardia lambl... 80 3e-14
UniRef50_Q8SRH7 Cluster: 60S RIBOSOMAL PROTEIN L17; n=1; Encepha... 74 1e-12
UniRef50_UPI00015601D6 Cluster: PREDICTED: hypothetical protein;... 73 2e-12
UniRef50_Q6ZNV0 Cluster: CDNA FLJ27083 fis, clone SPL03425; n=2;... 73 2e-12
UniRef50_Q98S09 Cluster: 60S ribosomal protein L17; n=1; Guillar... 73 3e-12
UniRef50_A2DM53 Cluster: Ribosomal protein L22, putative; n=1; T... 65 6e-10
UniRef50_A7PPU4 Cluster: Chromosome chr18 scaffold_24, whole gen... 62 4e-09
UniRef50_Q8TX36 Cluster: 50S ribosomal protein L22P; n=7; Archae... 60 2e-08
UniRef50_Q9UXA2 Cluster: 50S ribosomal protein L22P; n=5; Thermo... 54 1e-06
UniRef50_Q9YF76 Cluster: 50S ribosomal protein L22P; n=2; Desulf... 54 2e-06
UniRef50_UPI0001553410 Cluster: PREDICTED: hypothetical protein;... 51 1e-05
UniRef50_Q9V1U0 Cluster: 50S ribosomal protein L22P; n=6; Euryar... 51 1e-05
UniRef50_A0RVX8 Cluster: Ribosomal protein L22; n=2; Thermoprote... 49 6e-05
UniRef50_O28359 Cluster: 50S ribosomal protein L22P; n=6; Euryar... 47 2e-04
UniRef50_UPI0000056230 Cluster: ribosomal protein L22; n=1; Aqui... 45 7e-04
UniRef50_O66436 Cluster: 50S ribosomal protein L22; n=3; Aquifex... 45 7e-04
UniRef50_Q0W1Y4 Cluster: 50S ribosomal protein L22P; n=4; Archae... 45 0.001
UniRef50_Q9HIR4 Cluster: 50S ribosomal protein L22P; n=5; Thermo... 45 0.001
UniRef50_A5AXX3 Cluster: Putative uncharacterized protein; n=1; ... 43 0.003
UniRef50_Q8XV17 Cluster: 50S ribosomal protein L22; n=30; Bacter... 43 0.003
UniRef50_O85387 Cluster: 50S ribosomal protein L22; n=179; Bacte... 43 0.004
UniRef50_Q2FT36 Cluster: 50S ribosomal protein L22P; n=4; Methan... 42 0.007
UniRef50_Q2QAS6 Cluster: Ribosomal protein L22; n=2; environment... 41 0.011
UniRef50_P15008 Cluster: 50S ribosomal protein L22P; n=6; Haloba... 41 0.011
UniRef50_Q6F1Y9 Cluster: 50S ribosomal protein L22; n=2; Firmicu... 40 0.020
UniRef50_P62650 Cluster: 50S ribosomal protein L22P; n=1; Nanoar... 40 0.035
UniRef50_Q01BQ9 Cluster: 50S ribosomal protein L22-like; n=2; Os... 38 0.14
UniRef50_Q7QWE5 Cluster: GLP_336_29458_28835; n=1; Giardia lambl... 36 0.32
UniRef50_Q8ZWH7 Cluster: 50S ribosomal protein L22P; n=6; Thermo... 36 0.56
UniRef50_Q1ISB7 Cluster: Ribosomal protein L22; n=1; Acidobacter... 35 0.99
UniRef50_Q0EW41 Cluster: Ribosomal protein L22; n=1; Mariprofund... 34 1.3
UniRef50_UPI0000F2BD68 Cluster: PREDICTED: similar to keratinocy... 34 1.7
UniRef50_Q68W83 Cluster: 50S ribosomal protein L22; n=11; Alphap... 33 2.3
UniRef50_Q9Z322 Cluster: NaPi-2 beta; n=1; Rattus norvegicus|Rep... 32 5.3
UniRef50_A3UK34 Cluster: Putative uncharacterized protein; n=1; ... 32 5.3
UniRef50_A0YAE7 Cluster: Putative uncharacterized protein; n=1; ... 32 5.3
UniRef50_Q92GX1 Cluster: 50S ribosomal protein L22; n=19; Alphap... 32 5.3
UniRef50_UPI0000F1E090 Cluster: PREDICTED: hypothetical protein;... 32 7.0
UniRef50_Q2S563 Cluster: Putative uncharacterized protein; n=1; ... 32 7.0
UniRef50_A5KRQ6 Cluster: Ribosomal protein L22; n=1; candidate d... 32 7.0
UniRef50_Q8DM81 Cluster: Tlr0242 protein; n=1; Synechococcus elo... 31 9.2
UniRef50_Q3LVW9 Cluster: Ribosomal protein L17; n=1; Bigelowiell... 31 9.2
UniRef50_A7PWG6 Cluster: Chromosome chr8 scaffold_34, whole geno... 31 9.2
UniRef50_Q855W9 Cluster: Gp103; n=1; Mycobacterium phage Barnyar... 31 9.2
>UniRef50_P18621 Cluster: 60S ribosomal protein L17; n=135;
Eukaryota|Rep: 60S ribosomal protein L17 - Homo sapiens
(Human)
Length = 184
Score = 135 bits (327), Expect = 4e-31
Identities = 59/78 (75%), Positives = 70/78 (89%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQ 182
KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PFRR+NGGVGRCAQ
Sbjct: 13 KSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQ 72
Query: 183 AKQFGTTQGRWPKKSAEF 236
AKQ+G TQGRWPKKSAEF
Sbjct: 73 AKQWGWTQGRWPKKSAEF 90
Score = 100 bits (240), Expect = 1e-20
Identities = 48/90 (53%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Frame = +2
Query: 176 CSSKAVWHNT-GSLAQEIRRIPLAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRT 352
C+ W T G ++ L ++++AESNA+ K LDVD L+I+HIQ N+AP +RRRT
Sbjct: 70 CAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRT 129
Query: 353 YRAHGRINPYMSSPCHIEVCLSERADAVAR 442
YRAHGRINPYMSSPCHIE+ L+E+ V +
Sbjct: 130 YRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>UniRef50_Q9BL19 Cluster: Ribosomal protein, large subunit protein
17, isoform a; n=5; Eukaryota|Rep: Ribosomal protein,
large subunit protein 17, isoform a - Caenorhabditis
elegans
Length = 187
Score = 125 bits (302), Expect = 4e-28
Identities = 56/78 (71%), Positives = 66/78 (84%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQ 182
KSCKARGS+LRVHFKNT+E AMA+R MPLRRA +L +V E KE +PFRRF+GG+GR AQ
Sbjct: 15 KSCKARGSDLRVHFKNTHEAAMALRGMPLRRAQAFLNHVKEHKEIVPFRRFHGGIGRAAQ 74
Query: 183 AKQFGTTQGRWPKKSAEF 236
KQ+ TTQGRWP KSA+F
Sbjct: 75 TKQWNTTQGRWPVKSADF 92
Score = 103 bits (248), Expect = 1e-21
Identities = 49/74 (66%), Positives = 60/74 (81%)
Frame = +2
Query: 239 LAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSPCHIEVCLS 418
L ++++AESNA+ K LDVD L+I+HI RA LRRRTYRAHGRINPYMSSPCHIEV L+
Sbjct: 94 LDLLKNAESNAEYKGLDVDHLVIEHINVQRAAKLRRRTYRAHGRINPYMSSPCHIEVILA 153
Query: 419 ERADAVARVAPTDD 460
E+ D V++ PTDD
Sbjct: 154 EKEDVVSK--PTDD 165
>UniRef50_Q5DHE6 Cluster: SJCHGC09296 protein; n=5; Bilateria|Rep:
SJCHGC09296 protein - Schistosoma japonicum (Blood
fluke)
Length = 193
Score = 115 bits (277), Expect = 4e-25
Identities = 55/77 (71%), Positives = 62/77 (80%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQ 182
K+CKAR LR HFKN +E A A++ M L+RA YLKNVIEKKE IPFRRFNGGVGR AQ
Sbjct: 15 KTCKARIPYLRTHFKNMHECACAVKGMTLQRAQTYLKNVIEKKEIIPFRRFNGGVGRHAQ 74
Query: 183 AKQFGTTQGRWPKKSAE 233
AK + TTQGRWPKKSA+
Sbjct: 75 AKVWKTTQGRWPKKSAQ 91
Score = 86.6 bits (205), Expect = 2e-16
Identities = 45/90 (50%), Positives = 59/90 (65%), Gaps = 4/90 (4%)
Frame = +2
Query: 191 VWHNT-GSLAQEIRRIPLAVIEDAESNA---DNKTLDVDRLLIDHIQANRAPCLRRRTYR 358
VW T G ++ ++ L ++ +A SN D K + RL I HIQ N+AP +RRRTYR
Sbjct: 77 VWKTTQGRWPKKSAQMLLQLLHNAFSNGVYKDIKGGEASRLFIKHIQVNQAPKMRRRTYR 136
Query: 359 AHGRINPYMSSPCHIEVCLSERADAVARVA 448
AHGRINPYM SPCH+EV L+ + D V +VA
Sbjct: 137 AHGRINPYMCSPCHVEVILATKDDIVPKVA 166
>UniRef50_Q7RR03 Cluster: Ribosomal protein L22; n=1; Plasmodium
yoelii yoelii|Rep: Ribosomal protein L22 - Plasmodium
yoelii yoelii
Length = 249
Score = 113 bits (271), Expect = 2e-24
Identities = 52/78 (66%), Positives = 59/78 (75%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQ 182
K KA +LRVHFKNTYETA AIR+M L A +YL VIEKK C+PFRR+NGGVGR Q
Sbjct: 13 KCAKAAAVDLRVHFKNTYETARAIRRMNLLEAKKYLNAVIEKKRCVPFRRYNGGVGRTNQ 72
Query: 183 AKQFGTTQGRWPKKSAEF 236
AK+F TQGRWP KS +F
Sbjct: 73 AKEFNHTQGRWPVKSCKF 90
Score = 70.9 bits (166), Expect = 1e-11
Identities = 33/53 (62%), Positives = 39/53 (73%)
Frame = +2
Query: 263 SNADNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSE 421
SN +K LDV +L I HI NRA RRRT++AHGRINP+MSSPCHI+V E
Sbjct: 151 SNNKSKNLDVGKLKIIHIMVNRARPGRRRTFKAHGRINPFMSSPCHIQVIARE 203
>UniRef50_Q8IDI5 Cluster: Ribosomal protein L17, putative; n=5;
Plasmodium|Rep: Ribosomal protein L17, putative -
Plasmodium falciparum (isolate 3D7)
Length = 203
Score = 112 bits (270), Expect = 3e-24
Identities = 50/78 (64%), Positives = 59/78 (75%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQ 182
K K G +LRVHFKNTYE A AIR+M L A +YL +VIEKK C+PFR++NGGVGR Q
Sbjct: 13 KCAKGAGVDLRVHFKNTYEAARAIRRMKLLEAKKYLNDVIEKKRCVPFRKYNGGVGRTNQ 72
Query: 183 AKQFGTTQGRWPKKSAEF 236
AK+F TQGRWP KS +F
Sbjct: 73 AKEFNHTQGRWPAKSCKF 90
Score = 77.4 bits (182), Expect = 1e-13
Identities = 32/75 (42%), Positives = 51/75 (68%)
Frame = +2
Query: 197 HNTGSLAQEIRRIPLAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRIN 376
H G + + L ++++ ++NA+++ LDV +L + H+ N+A RRRTY+AHGRIN
Sbjct: 78 HTQGRWPAKSCKFLLNILDNVQANAESRNLDVSKLRLIHVMVNKARPGRRRTYKAHGRIN 137
Query: 377 PYMSSPCHIEVCLSE 421
P+MSSPCHI++ E
Sbjct: 138 PFMSSPCHIQIIARE 152
>UniRef50_Q93VI3 Cluster: 60S ribosomal protein L17-1; n=18;
Eukaryota|Rep: 60S ribosomal protein L17-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 176
Score = 108 bits (260), Expect = 5e-23
Identities = 53/79 (67%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQ 182
KSCKARG++LRVHFKNT ETA AIRK+PL +A RYL++VI K+ IPF RF GVGR AQ
Sbjct: 13 KSCKARGADLRVHFKNTRETAHAIRKLPLNKAKRYLEDVIAHKQAIPFTRFCRGVGRTAQ 72
Query: 183 AK-QFGTTQGRWPKKSAEF 236
AK + QGRWP KSA+F
Sbjct: 73 AKNRHSNGQGRWPAKSAQF 91
Score = 94.3 bits (224), Expect = 1e-18
Identities = 44/72 (61%), Positives = 55/72 (76%)
Frame = +2
Query: 239 LAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSPCHIEVCLS 418
L ++++AESNA+ K LDVD L I HIQ N+A RRRTYRAHGRINPYMS+PCHIE+ LS
Sbjct: 93 LDLLKNAESNAEVKGLDVDALFISHIQVNQAAKQRRRTYRAHGRINPYMSNPCHIELILS 152
Query: 419 ERADAVARVAPT 454
E+ + V + T
Sbjct: 153 EKEEPVKKEPET 164
>UniRef50_O48557 Cluster: 60S ribosomal protein L17; n=53;
Eukaryota|Rep: 60S ribosomal protein L17 - Zea mays
(Maize)
Length = 171
Score = 104 bits (250), Expect = 8e-22
Identities = 51/79 (64%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQ 182
KS KA G +LRVHFKNT ETA A+RK+PL +A RYL++VI K+ IPFRR+ GGVGR AQ
Sbjct: 13 KSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPFRRYCGGVGRTAQ 72
Query: 183 AK-QFGTTQGRWPKKSAEF 236
AK + QGRWP KSA F
Sbjct: 73 AKSRHSNGQGRWPVKSARF 91
Score = 97.9 bits (233), Expect = 9e-20
Identities = 46/73 (63%), Positives = 56/73 (76%)
Frame = +2
Query: 230 RIPLAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSPCHIEV 409
R L ++++AESNAD K LDVD L + HIQ N+A RRRTYRAHGRINPYMSSPCHIE+
Sbjct: 90 RFILDLLKNAESNADVKGLDVDNLYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 149
Query: 410 CLSERADAVARVA 448
LSE+ + V + A
Sbjct: 150 ILSEKEEPVKKEA 162
>UniRef50_A7QP86 Cluster: Chromosome chr1 scaffold_136, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr1 scaffold_136, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 261
Score = 103 bits (248), Expect = 1e-21
Identities = 51/79 (64%), Positives = 61/79 (77%), Gaps = 1/79 (1%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQ 182
KSCKARG +LRVHFKNT ETA AIRK+PL +A RYL++V+ K+ IPF RF GVGR AQ
Sbjct: 91 KSCKARGLDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLVHKQAIPFTRFCRGVGRTAQ 150
Query: 183 AK-QFGTTQGRWPKKSAEF 236
AK + QGRWP KSA++
Sbjct: 151 AKNRHSNGQGRWPVKSAKY 169
Score = 96.7 bits (230), Expect = 2e-19
Identities = 46/72 (63%), Positives = 55/72 (76%)
Frame = +2
Query: 239 LAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSPCHIEVCLS 418
L ++++AESNAD K LDVD L I HIQ N+A RRRTYRAHGRINPYMSSPCHIE+ LS
Sbjct: 171 LDLLKNAESNADLKGLDVDSLYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILS 230
Query: 419 ERADAVARVAPT 454
E+ + V + T
Sbjct: 231 EKEEPVKKEPET 242
>UniRef50_Q8WTK4 Cluster: Ribosomal protein, large subunit protein
17, isoform b; n=48; Bilateria|Rep: Ribosomal protein,
large subunit protein 17, isoform b - Caenorhabditis
elegans
Length = 159
Score = 103 bits (248), Expect = 1e-21
Identities = 49/74 (66%), Positives = 60/74 (81%)
Frame = +2
Query: 239 LAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSPCHIEVCLS 418
L ++++AESNA+ K LDVD L+I+HI RA LRRRTYRAHGRINPYMSSPCHIEV L+
Sbjct: 66 LDLLKNAESNAEYKGLDVDHLVIEHINVQRAAKLRRRTYRAHGRINPYMSSPCHIEVILA 125
Query: 419 ERADAVARVAPTDD 460
E+ D V++ PTDD
Sbjct: 126 EKEDVVSK--PTDD 137
Score = 81.4 bits (192), Expect = 9e-15
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRF 155
KSCKARGS+LRVHFKNT+E AMA+R MPLRRA +L +V E KE +PFRRF
Sbjct: 15 KSCKARGSDLRVHFKNTHEAAMALRGMPLRRAQAFLNHVKEHKEIVPFRRF 65
>UniRef50_Q5CVN1 Cluster: 60S ribosomal protein L17; n=9;
Eukaryota|Rep: 60S ribosomal protein L17 -
Cryptosporidium parvum Iowa II
Length = 187
Score = 101 bits (242), Expect = 8e-21
Identities = 48/78 (61%), Positives = 59/78 (75%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQ 182
KS +GS+LRV +KNTYETA AI+ M L A +YL +VI KK C+PFRRFNGGVGR A+
Sbjct: 13 KSVMCKGSDLRVSYKNTYETATAIKGMYLLDARQYLLDVIAKKRCVPFRRFNGGVGRTAK 72
Query: 183 AKQFGTTQGRWPKKSAEF 236
A +F TQGR+P+KS F
Sbjct: 73 ANEFKLTQGRFPEKSCRF 90
Score = 72.9 bits (171), Expect = 3e-12
Identities = 35/77 (45%), Positives = 48/77 (62%)
Frame = +2
Query: 206 GSLAQEIRRIPLAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYM 385
G ++ R L ++++AESN D K LDVDRL++ AP RRRT+RAHGRI P+
Sbjct: 81 GRFPEKSCRFLLDLLQNAESNCDMKGLDVDRLMLVSAVVTHAPFNRRRTFRAHGRITPFK 140
Query: 386 SSPCHIEVCLSERADAV 436
S PC+I++ E D V
Sbjct: 141 SQPCNIQLIFKEIDDTV 157
>UniRef50_O14339 Cluster: 60S ribosomal protein L17-A; n=4;
Dikarya|Rep: 60S ribosomal protein L17-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 187
Score = 101 bits (242), Expect = 8e-21
Identities = 46/78 (58%), Positives = 55/78 (70%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQ 182
K KARG+ LR HFKN+ E A I M L++A +L NV E K+ +PFRRFNGGVGR AQ
Sbjct: 13 KCAKARGAYLRTHFKNSREVAFTINGMSLKKAFIFLDNVKEHKQAVPFRRFNGGVGRTAQ 72
Query: 183 AKQFGTTQGRWPKKSAEF 236
K+FG TQ RWP KS +F
Sbjct: 73 GKEFGVTQARWPVKSVKF 90
Score = 85.0 bits (201), Expect = 7e-16
Identities = 36/70 (51%), Positives = 53/70 (75%)
Frame = +2
Query: 245 VIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSER 424
++++AE+NA+ K LD+D+L+I H+Q N AP RRRTYRAHGR+ Y+SSP HIE+ ++E
Sbjct: 94 LLKNAEANAEAKGLDMDKLIIKHVQVNAAPKQRRRTYRAHGRVTAYLSSPSHIEIIVAEE 153
Query: 425 ADAVARVAPT 454
+AV + T
Sbjct: 154 EEAVPKANDT 163
>UniRef50_P05740 Cluster: 60S ribosomal protein L17-A; n=27;
Eukaryota|Rep: 60S ribosomal protein L17-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 184
Score = 96.3 bits (229), Expect = 3e-19
Identities = 44/78 (56%), Positives = 54/78 (69%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQ 182
KS ARGS LRV FKNT ETA AI L +A +YL+ V++ + IPFRRFN +GR AQ
Sbjct: 13 KSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLEQVLDHQRAIPFRRFNSSIGRTAQ 72
Query: 183 AKQFGTTQGRWPKKSAEF 236
K+FG T+ RWP KS +F
Sbjct: 73 GKEFGVTKARWPAKSVKF 90
Score = 83.8 bits (198), Expect = 2e-15
Identities = 37/68 (54%), Positives = 52/68 (76%)
Frame = +2
Query: 245 VIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSER 424
++++A +NA+ K LD +L + HIQ N+AP RRRTYRAHGRIN Y SSP HIE+ ++E+
Sbjct: 94 LLQNAAANAEAKGLDATKLYVSHIQVNQAPKQRRRTYRAHGRINKYESSPSHIELVVTEK 153
Query: 425 ADAVARVA 448
+AVA+ A
Sbjct: 154 EEAVAKAA 161
>UniRef50_Q7TPJ7 Cluster: Ac2-210; n=3; Eutheria|Rep: Ac2-210 -
Rattus norvegicus (Rat)
Length = 220
Score = 92.3 bits (219), Expect = 5e-18
Identities = 41/62 (66%), Positives = 51/62 (82%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQ 182
KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V KK+C+PFRR+NGGV A+
Sbjct: 13 KSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVESNAE 72
Query: 183 AK 188
K
Sbjct: 73 LK 74
Score = 88.2 bits (209), Expect = 8e-17
Identities = 40/61 (65%), Positives = 49/61 (80%)
Frame = +2
Query: 260 ESNADNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSERADAVA 439
ESNA+ K LD D L+I+HIQ N+AP +RRRTYRAHGRIN YMSSPCHIE+ L+E+ V
Sbjct: 68 ESNAELKGLDGDSLVIEHIQVNKAPKMRRRTYRAHGRINLYMSSPCHIEMILTEKEQIVP 127
Query: 440 R 442
+
Sbjct: 128 K 128
>UniRef50_A1XED3 Cluster: RPL17; n=14; Eutheria|Rep: RPL17 - Bos
taurus (Bovine)
Length = 86
Score = 87.8 bits (208), Expect = 1e-16
Identities = 38/55 (69%), Positives = 46/55 (83%)
Frame = +2
Query: 278 KTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSERADAVAR 442
K LDVD L+I+HIQ N+AP +RRRTYRAHGRINPYMSSPCHIE+ L+E+ V +
Sbjct: 1 KGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPK 55
>UniRef50_A4D1R6 Cluster: Similar to 60S ribosomal protein L17;
n=11; Eutheria|Rep: Similar to 60S ribosomal protein L17
- Homo sapiens (Human)
Length = 102
Score = 83.4 bits (197), Expect = 2e-15
Identities = 39/68 (57%), Positives = 52/68 (76%)
Frame = +2
Query: 239 LAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSPCHIEVCLS 418
+ ++E AESNA+ K LDVD L+I+HIQ N+AP +RRR RA+GRI P MSSPCHIE+ L+
Sbjct: 13 VTMVEWAESNAELKGLDVDSLVIEHIQVNKAPKMRRRIDRAYGRIYPCMSSPCHIEMILT 72
Query: 419 ERADAVAR 442
E+ V +
Sbjct: 73 EKEQIVPK 80
>UniRef50_A4D1R5 Cluster: Similar to Ubiquinol-cytochrome C
reductase iron-sulfur subunit, mitochondrial; n=1; Homo
sapiens|Rep: Similar to Ubiquinol-cytochrome C reductase
iron-sulfur subunit, mitochondrial - Homo sapiens
(Human)
Length = 282
Score = 83.4 bits (197), Expect = 2e-15
Identities = 39/68 (57%), Positives = 52/68 (76%)
Frame = +2
Query: 239 LAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSPCHIEVCLS 418
+ ++E AESNA+ K LDVD L+I+HIQ N+AP +RRR RA+GRI P MSSPCHIE+ L+
Sbjct: 13 VTMVEWAESNAELKGLDVDSLVIEHIQVNKAPKMRRRIDRAYGRIYPCMSSPCHIEMILT 72
Query: 419 ERADAVAR 442
E+ V +
Sbjct: 73 EKEQIVPK 80
>UniRef50_Q7QWE4 Cluster: GLP_336_28895_29389; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_28895_29389 - Giardia lamblia
ATCC 50803
Length = 164
Score = 79.8 bits (188), Expect = 3e-14
Identities = 36/72 (50%), Positives = 49/72 (68%)
Frame = +3
Query: 12 KARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQ 191
K+R ++ FKNTY T AI+ M ++RA YL NV+ KE +PF +F GVGR +QA+
Sbjct: 15 KSRRDGVKASFKNTYSTCRAIKGMGVKRAFAYLDNVLNHKEIVPFFKFYKGVGRHSQARG 74
Query: 192 FGTTQGRWPKKS 227
GT +GRWP+KS
Sbjct: 75 SGTDKGRWPEKS 86
Score = 51.2 bits (117), Expect = 1e-05
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +2
Query: 245 VIEDAESNADNK-TLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSE 421
+++ A SNA + + D L + NRA RRRT+RAHGRI+ Y S PCH+E+ +
Sbjct: 93 ILKQAVSNAKHAHKKEEDELYVISYCVNRARGRRRRTFRAHGRISKYESQPCHVELIVGP 152
Query: 422 R 424
+
Sbjct: 153 K 153
>UniRef50_Q8SRH7 Cluster: 60S RIBOSOMAL PROTEIN L17; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L17
- Encephalitozoon cuniculi
Length = 183
Score = 74.1 bits (174), Expect = 1e-12
Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 20/98 (20%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQ 182
K+ KA+ N +V FK T E + +R+ + A++YLKNVI K EC+PFRR+N G G+ Q
Sbjct: 14 KAVKAKIDNAKVSFKKTREASCTLRRRKVLDAIQYLKNVIAKTECVPFRRYNRGCGQTHQ 73
Query: 183 AKQFG--------------------TTQGRWPKKSAEF 236
A++F T+GRWPKKSAEF
Sbjct: 74 ARKFSIPRREIVKANGEKKIKKGHVQTRGRWPKKSAEF 111
Score = 68.5 bits (160), Expect = 7e-11
Identities = 27/57 (47%), Positives = 43/57 (75%)
Frame = +2
Query: 239 LAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSPCHIEV 409
++V+E+ + NA+ K LD L+I H+Q ++AP + RT+RAHGR+NP+ SPCHI++
Sbjct: 113 ISVLENIKENAETKGLDPKDLVITHVQVSKAPKIFGRTFRAHGRVNPFNKSPCHIQM 169
>UniRef50_UPI00015601D6 Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 191
Score = 73.3 bits (172), Expect = 2e-12
Identities = 43/78 (55%), Positives = 48/78 (61%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQ 182
KSCK+R SNL VHFKNT ET +LK V PF +NGGVGRCAQ
Sbjct: 24 KSCKSRSSNLHVHFKNTRETV-------------FLKRV-------PFCYYNGGVGRCAQ 63
Query: 183 AKQFGTTQGRWPKKSAEF 236
AKQ G T+G WPK+SAEF
Sbjct: 64 AKQQGWTRGWWPKQSAEF 81
>UniRef50_Q6ZNV0 Cluster: CDNA FLJ27083 fis, clone SPL03425; n=2;
Homo sapiens|Rep: CDNA FLJ27083 fis, clone SPL03425 -
Homo sapiens (Human)
Length = 136
Score = 73.3 bits (172), Expect = 2e-12
Identities = 31/55 (56%), Positives = 44/55 (80%)
Frame = +2
Query: 260 ESNADNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSER 424
+SNA+ K LD+D L+I+ IQ N+AP + TYRAHG+INPY++S CHIE+ L+E+
Sbjct: 35 QSNAEFKVLDIDSLIIEPIQVNKAPKMHCWTYRAHGQINPYVTSACHIEMILTEK 89
>UniRef50_Q98S09 Cluster: 60S ribosomal protein L17; n=1; Guillardia
theta|Rep: 60S ribosomal protein L17 - Guillardia theta
(Cryptomonas phi)
Length = 153
Score = 72.9 bits (171), Expect = 3e-12
Identities = 35/69 (50%), Positives = 43/69 (62%)
Frame = +3
Query: 27 NLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQ 206
N +VH KNT E I M L RA +LKNVI KKE +PF+ + G+GR +Q Q
Sbjct: 14 NQKVHLKNTREVGCCIIGMTLGRAENFLKNVILKKEIVPFKVYRYGIGRKSQVNQSKNIS 73
Query: 207 GRWPKKSAE 233
GRWPKKSA+
Sbjct: 74 GRWPKKSAK 82
Score = 53.2 bits (122), Expect = 3e-06
Identities = 25/80 (31%), Positives = 46/80 (57%)
Frame = +2
Query: 203 TGSLAQEIRRIPLAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPY 382
+G ++ +I L++I++ S + + I +I N+A RRRT+RAHGR+N +
Sbjct: 73 SGRWPKKSAKIILSLIKNLNSIVSKNKSEDNPFYIKNININQAVRGRRRTFRAHGRVNSF 132
Query: 383 MSSPCHIEVCLSERADAVAR 442
S+PCHI + L+ + + +
Sbjct: 133 ESNPCHIRISLTNNSTNIPK 152
>UniRef50_A2DM53 Cluster: Ribosomal protein L22, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L22,
putative - Trichomonas vaginalis G3
Length = 164
Score = 65.3 bits (152), Expect = 6e-10
Identities = 31/77 (40%), Positives = 43/77 (55%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQ 182
K+ KA RVHFK ET I+ M + A+ YL+ V+ K+ +PF R+ GG+ AQ
Sbjct: 14 KALKASTGLERVHFKPMMETGRVIKGMKAQDAIAYLEAVMRKERAVPFFRYKGGISHHAQ 73
Query: 183 AKQFGTTQGRWPKKSAE 233
++G RWP K AE
Sbjct: 74 GHEWGCPTSRWPVKCAE 90
Score = 51.6 bits (118), Expect = 8e-06
Identities = 25/65 (38%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Frame = +2
Query: 239 LAVIEDAESNADNKT-LDVDRLLIDHIQANRAPCLR-RRTYRAHGRINPYMSSPCHIEVC 412
+ +I+ A + A K ++VD +L+ H+Q NRA R RR ++AHGR+ Y S P ++++
Sbjct: 93 IKLIKTALAGAPQKPGVNVDEVLVAHVQCNRATQYRWRRIHQAHGRVKSYASPPTNVQIV 152
Query: 413 LSERA 427
L+E+A
Sbjct: 153 LAEKA 157
>UniRef50_A7PPU4 Cluster: Chromosome chr18 scaffold_24, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_24, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 330
Score = 62.5 bits (145), Expect = 4e-09
Identities = 35/79 (44%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQ 182
K CK R S+ RVHFKNT ET A ++ L A YL++ ++ +PF RF GVGR AQ
Sbjct: 13 KFCKTRDSDFRVHFKNTRETTDATSRLLLTMAREYLEDAPVHEQAMPFTRFCRGVGRTAQ 72
Query: 183 AK-QFGTTQGRWPKKSAEF 236
AK + QG KS ++
Sbjct: 73 AKNRHSNGQGCSSVKSVKY 91
Score = 33.5 bits (73), Expect = 2.3
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 197 HNTGSLAQEIRRIP--LAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRTYRAH 364
H+ G ++ + L +++ AESNAD K LDV+ I HIQ R Y +H
Sbjct: 77 HSNGQGCSSVKSVKYILVLLKHAESNADLKGLDVNSPYISHIQPCTGGFHFRSLYLSH 134
>UniRef50_Q8TX36 Cluster: 50S ribosomal protein L22P; n=7;
Archaea|Rep: 50S ribosomal protein L22P - Methanopyrus
kandleri
Length = 159
Score = 60.1 bits (139), Expect = 2e-08
Identities = 32/75 (42%), Positives = 43/75 (57%)
Frame = +2
Query: 200 NTGSLAQEIRRIPLAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINP 379
+ G ++ R L V+E AE+NA+ K LD DRL I HI A++ +R RA GR P
Sbjct: 85 DAGRFPEKAAREILRVLEHAEANAEYKGLDTDRLYIKHIAAHKGRVIRGWIPRAFGRATP 144
Query: 380 YMSSPCHIEVCLSER 424
+ + HIEV L ER
Sbjct: 145 FNTPTTHIEVILEER 159
Score = 52.4 bits (120), Expect = 5e-06
Identities = 30/76 (39%), Positives = 43/76 (56%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQ 182
++ KA LR+ K+ E AIR MPL RA +L+ VI K+E +PFR+ V Q
Sbjct: 20 RTAKAFIRELRISPKHAREICRAIRGMPLDRAKEFLRRVIRKEEAVPFRKHKKKVPHRRQ 79
Query: 183 AKQFGTTQGRWPKKSA 230
+ G GR+P+K+A
Sbjct: 80 IRP-GWDAGRFPEKAA 94
>UniRef50_Q9UXA2 Cluster: 50S ribosomal protein L22P; n=5;
Thermoprotei|Rep: 50S ribosomal protein L22P -
Sulfolobus solfataricus
Length = 157
Score = 54.4 bits (125), Expect = 1e-06
Identities = 31/66 (46%), Positives = 42/66 (63%)
Frame = +2
Query: 224 IRRIPLAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSPCHI 403
IR++ L V+E+AE+NA NK LDVD+L+I HI A++ L+R RA GR +I
Sbjct: 91 IRQV-LKVLENAEANATNKGLDVDKLIIRHIAAHKGITLQRYMPRAFGRATAKYRRTSNI 149
Query: 404 EVCLSE 421
EV L E
Sbjct: 150 EVILEE 155
Score = 43.6 bits (98), Expect = 0.002
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQ 182
K KA ++ ++ Y AIR M L A +L V+E+KE +PF R+N G +
Sbjct: 15 KIAKAVIRDVPESIRDLYNVCKAIRGMYLNDAKDFLNRVLEEKEALPFWRYNKGASHKSN 74
Query: 183 -AKQFGTTQGRWPKKS 227
+ ++ GR+PKK+
Sbjct: 75 ISAKWKIKAGRYPKKA 90
>UniRef50_Q9YF76 Cluster: 50S ribosomal protein L22P; n=2;
Desulfurococcales|Rep: 50S ribosomal protein L22P -
Aeropyrum pernix
Length = 156
Score = 53.6 bits (123), Expect = 2e-06
Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +3
Query: 12 KARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNG-GVGRCAQAK 188
KA N+ VH K E A AI M + A RYL+ VIEK+E +PFRR +G R A
Sbjct: 18 KAVLRNVPVHPKIMAEVARAISGMRVDEARRYLRAVIEKREAVPFRRAHGKQAHRRGLAD 77
Query: 189 QFGTTQGRWPKKSAEF 236
++G GR+P K+A +
Sbjct: 78 KWGWPVGRYPVKAARY 93
Score = 50.4 bits (115), Expect = 2e-05
Identities = 26/64 (40%), Positives = 38/64 (59%)
Frame = +2
Query: 230 RIPLAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSPCHIEV 409
R L ++++ E+NA NK LDV+RL I H+ A++ L+R RA GR P HIE+
Sbjct: 92 RYMLKLLDNVEANAANKNLDVERLKIIHVAAHKGITLKRWMPRAWGRATPRNRVHSHIEI 151
Query: 410 CLSE 421
+ E
Sbjct: 152 MVRE 155
>UniRef50_UPI0001553410 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 405
Score = 51.2 bits (117), Expect = 1e-05
Identities = 25/57 (43%), Positives = 34/57 (59%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGR 173
KSCK+ GSNL VHFKN +E + I + + LK V K + + F+ +NGGV R
Sbjct: 78 KSCKSWGSNLCVHFKNIWEISQVIEGTDICKFTESLKGVTLKNQYMLFQLYNGGVNR 134
>UniRef50_Q9V1U0 Cluster: 50S ribosomal protein L22P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L22P -
Pyrococcus abyssi
Length = 155
Score = 50.8 bits (116), Expect = 1e-05
Identities = 27/59 (45%), Positives = 35/59 (59%)
Frame = +2
Query: 245 VIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSE 421
V+ +A++NA K LD D+L I HI A+R P LR RA GR P+ HIEV + E
Sbjct: 94 VLLNAQNNAKQKGLDPDKLRIIHIAAHRGPVLRGWYPRAFGRPTPFNEQTTHIEVVVEE 152
Score = 44.8 bits (101), Expect = 0.001
Identities = 27/77 (35%), Positives = 40/77 (51%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQ 182
+ +A G +LR+ K E +R M L A+RYL +VI + +P +R+N G
Sbjct: 16 RMARASGRDLRISPKLAVEVCRELRGMMLNDALRYLDDVIALRRPVPLKRYNDSQGH-KP 74
Query: 183 AKQFGTTQGRWPKKSAE 233
K FG GR+P K A+
Sbjct: 75 GKGFG--PGRYPVKVAK 89
>UniRef50_A0RVX8 Cluster: Ribosomal protein L22; n=2;
Thermoprotei|Rep: Ribosomal protein L22 - Cenarchaeum
symbiosum
Length = 152
Score = 48.8 bits (111), Expect = 6e-05
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = +3
Query: 33 RVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQGR 212
++ K+ E ++ IR M + +A +L+ VIEKK +PFRRF VG + G GR
Sbjct: 25 QISHKHAREISLHIRGMTVEKARDFLQAVIEKKRAVPFRRFKRQVGHRSDP---GVMAGR 81
Query: 213 WPKKSA 230
+P+KSA
Sbjct: 82 YPEKSA 87
Score = 38.3 bits (85), Expect = 0.080
Identities = 20/61 (32%), Positives = 35/61 (57%)
Frame = +2
Query: 239 LAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSPCHIEVCLS 418
+ ++++ ESNA+ K +D+DRL I A++ ++R RA GR P + H+E+
Sbjct: 91 IKLLDNLESNAEYKGMDLDRLTIVGAVAHKGILIKRFIPRAMGRSTPKNNVLTHVELVAR 150
Query: 419 E 421
E
Sbjct: 151 E 151
>UniRef50_O28359 Cluster: 50S ribosomal protein L22P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L22P -
Archaeoglobus fulgidus
Length = 155
Score = 47.2 bits (107), Expect = 2e-04
Identities = 25/78 (32%), Positives = 43/78 (55%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQ 182
K+ KA G + + FK+ E AIR + A + L++V+E K IPF+R V
Sbjct: 17 KAAKAMGYEMPISFKHAVEICRAIRGKKIEEARKLLEDVVEMKRAIPFKRHKKKVAHRRG 76
Query: 183 AKQFGTTQGRWPKKSAEF 236
+++ GR+P+K+A++
Sbjct: 77 LEKW--YAGRYPQKAAKY 92
Score = 44.8 bits (101), Expect = 0.001
Identities = 25/77 (32%), Positives = 38/77 (49%)
Frame = +2
Query: 194 WHNTGSLAQEIRRIPLAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRI 373
W+ G Q+ + L V+ + E+NA+ K LDV+ L+I H QA + + R RA GR
Sbjct: 80 WY-AGRYPQKAAKYVLKVLRNLEANAEYKGLDVENLVIVHAQAQKGRVIERYMPRAFGRA 138
Query: 374 NPYMSSPCHIEVCLSER 424
P +E+ R
Sbjct: 139 TPRFQQLTTVELVAEVR 155
>UniRef50_UPI0000056230 Cluster: ribosomal protein L22; n=1; Aquifex
aeolicus VF5|Rep: ribosomal protein L22 - Aquifex
aeolicus VF5
Length = 98
Score = 45.2 bits (102), Expect = 7e-04
Identities = 24/73 (32%), Positives = 38/73 (52%)
Frame = +2
Query: 212 LAQEIRRIPLAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSS 391
+ ++ RI V++ +NA+ K LD+DRL I A+ P L++ RAHGR
Sbjct: 21 IPKKAARIAEKVLKSVIANAEQKGLDLDRLYIKKAVADDGPILKKWIPRAHGRATMVRKR 80
Query: 392 PCHIEVCLSERAD 430
HI + L E+ +
Sbjct: 81 LSHITIVLEEKPE 93
>UniRef50_O66436 Cluster: 50S ribosomal protein L22; n=3;
Aquifex|Rep: 50S ribosomal protein L22 - Aquifex
aeolicus
Length = 133
Score = 45.2 bits (102), Expect = 7e-04
Identities = 24/73 (32%), Positives = 38/73 (52%)
Frame = +2
Query: 212 LAQEIRRIPLAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSS 391
+ ++ RI V++ +NA+ K LD+DRL I A+ P L++ RAHGR
Sbjct: 56 IPKKAARIAEKVLKSVIANAEQKGLDLDRLYIKKAVADDGPILKKWIPRAHGRATMVRKR 115
Query: 392 PCHIEVCLSERAD 430
HI + L E+ +
Sbjct: 116 LSHITIVLEEKPE 128
>UniRef50_Q0W1Y4 Cluster: 50S ribosomal protein L22P; n=4;
Archaea|Rep: 50S ribosomal protein L22P - Uncultured
methanogenic archaeon RC-I
Length = 153
Score = 44.8 bits (101), Expect = 0.001
Identities = 26/75 (34%), Positives = 39/75 (52%)
Frame = +3
Query: 6 SCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQA 185
+ KA + V K+ E IR M L A YL++VI+KK +PF++ VG +
Sbjct: 15 TAKAMAYEINVSPKHCQEICRQIRGMKLSAAKTYLQDVIDKKRSVPFKQHARNVGH--KR 72
Query: 186 KQFGTTQGRWPKKSA 230
Q G GR+P K++
Sbjct: 73 HQSGWPSGRYPVKAS 87
>UniRef50_Q9HIR4 Cluster: 50S ribosomal protein L22P; n=5;
Thermoplasmatales|Rep: 50S ribosomal protein L22P -
Thermoplasma acidophilum
Length = 151
Score = 44.8 bits (101), Expect = 0.001
Identities = 19/62 (30%), Positives = 39/62 (62%)
Frame = +2
Query: 245 VIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSER 424
++E+ E+NA+ K L+ D L+I HI AN+ +++ T +A+GR ++E+ ++E
Sbjct: 90 LLENVENNAEFKGLNTDNLVIKHIAANKGRMIKKYTPKAYGRAGANFKDLINLEIIVTEG 149
Query: 425 AD 430
++
Sbjct: 150 SE 151
Score = 35.1 bits (77), Expect = 0.75
Identities = 24/74 (32%), Positives = 36/74 (48%)
Frame = +3
Query: 12 KARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQ 191
KAR + K++ A +R MPL RA + VI K IP+ R+ V + +
Sbjct: 17 KARIREADISLKDSVNIAHHLRGMPLSRAKEIIDAVINKTYAIPYFRYLDSV-----SHR 71
Query: 192 FGTTQGRWPKKSAE 233
G GR+P K+A+
Sbjct: 72 PGVGPGRYPVKAAK 85
>UniRef50_A5AXX3 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 467
Score = 43.2 bits (97), Expect = 0.003
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGV 167
K C S+ RVHFKNT T A + L A YL++ + +++ +PF RF G+
Sbjct: 283 KFCNTGDSDSRVHFKNTRVTTRATSMLLLTMARGYLEDALVREQTMPFTRFCRGI 337
>UniRef50_Q8XV17 Cluster: 50S ribosomal protein L22; n=30;
Bacteria|Rep: 50S ribosomal protein L22 - Ralstonia
solanacearum (Pseudomonas solanacearum)
Length = 109
Score = 43.2 bits (97), Expect = 0.003
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +2
Query: 245 VIEDAESNAD-NKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSPCHIEVCL 415
V+E A +NA+ N+ D+D L + I ++A L+R T RA GR N CHI V L
Sbjct: 50 VVESAIANAEHNEGADIDELKVKSIYIDKATSLKRFTARAKGRGNRIEKQTCHITVTL 107
>UniRef50_O85387 Cluster: 50S ribosomal protein L22; n=179;
Bacteria|Rep: 50S ribosomal protein L22 - Coxiella
burnetii
Length = 115
Score = 42.7 bits (96), Expect = 0.004
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 245 VIEDAESNAD-NKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSE 421
V++ A +NA+ N+ D+D L + + + P RR RA GR N + CHI V +S+
Sbjct: 50 VLDSAIANAEHNEGADIDELKVSTVMVDEGPSARRFHARARGRANQILKRTCHITVKVSD 109
>UniRef50_Q2FT36 Cluster: 50S ribosomal protein L22P; n=4;
Methanomicrobiales|Rep: 50S ribosomal protein L22P -
Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 154
Score = 41.9 bits (94), Expect = 0.007
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +2
Query: 200 NTGSLAQEIRRIPLAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRTY--RAHGRI 373
+ G Q+ R+ L ++ + NA+ L+ D+L I H+ ANR +RRR++ RA GR
Sbjct: 78 DAGRYPQKASRVYLRLLNNVRKNAEYNGLEGDQLRIVHVSANRG--IRRRSFMPRAMGRA 135
Query: 374 NPYMSSPCHIEVCLSER 424
P +IE+ + E+
Sbjct: 136 TPKDRQTVNIELVVREQ 152
Score = 38.3 bits (85), Expect = 0.080
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +3
Query: 45 KNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTTQGRWPKK 224
K+ E A IR M L A YL+ V+ ++ IPF+RFN V + G GR+P+K
Sbjct: 28 KHAIEIAGFIRGMKLDDAAAYLEGVVALQKPIPFKRFNRNVPH--RKGLVGWDAGRYPQK 85
Query: 225 SA 230
++
Sbjct: 86 AS 87
>UniRef50_Q2QAS6 Cluster: Ribosomal protein L22; n=2; environmental
samples|Rep: Ribosomal protein L22 - uncultured marine
group II euryarchaeote HF70_59C08
Length = 175
Score = 41.1 bits (92), Expect = 0.011
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Frame = +3
Query: 15 ARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPF-RRFNGGVGRCAQA-- 185
AR N +H K+ Y+ A A++ M AV YL+ V++++ IP+ RR G G A
Sbjct: 24 ARAVNRDIHHKHCYQIARAVKGMYAGDAVEYLEKVVKQEVAIPYKRRSRAGKGGNTMAGH 83
Query: 186 KQFGTTQGRWPKKSA 230
++ GR+P+ ++
Sbjct: 84 RKGKMGPGRYPRNAS 98
>UniRef50_P15008 Cluster: 50S ribosomal protein L22P; n=6;
Halobacteriaceae|Rep: 50S ribosomal protein L22P -
Halobacterium salinarium (Halobacterium halobium)
Length = 156
Score = 41.1 bits (92), Expect = 0.011
Identities = 17/67 (25%), Positives = 37/67 (55%)
Frame = +2
Query: 239 LAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSPCHIEVCLS 418
L ++ + +NAD + D D ++I+H+ ++ + R RA GR + ++ C +E+ ++
Sbjct: 90 LKLLSNVSNNADQQGFDADEMVIEHVAPHKVGESQGRKPRAMGRATTWNATLCDVEIVVT 149
Query: 419 ERADAVA 439
E + A
Sbjct: 150 ETEEVTA 156
Score = 36.7 bits (81), Expect = 0.24
Identities = 22/76 (28%), Positives = 38/76 (50%)
Frame = +3
Query: 6 SCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQA 185
S KA + K++ A I + A YL+ VI+++ +PF++ N GVG
Sbjct: 14 SAKAMLRERSISLKHSKAIAREISGETVADAKEYLQAVIDEERSVPFKQHNSGVGHRNDI 73
Query: 186 KQFGTTQGRWPKKSAE 233
G GR+P+K+++
Sbjct: 74 D--GWDAGRYPEKASK 87
>UniRef50_Q6F1Y9 Cluster: 50S ribosomal protein L22; n=2;
Firmicutes|Rep: 50S ribosomal protein L22 - Mesoplasma
florum (Acholeplasma florum)
Length = 112
Score = 40.3 bits (90), Expect = 0.020
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 239 LAVIEDAESNA-DNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSPCHIEVCL 415
L ++ A +NA +N +D D+L + I N P L+R RAHGR + H+ + +
Sbjct: 48 LKLLNSAIANAVNNNGMDADKLFVKTIFVNEGPTLKRFRPRAHGRAYEILKRTSHVTIIV 107
Query: 416 SE 421
S+
Sbjct: 108 SD 109
>UniRef50_P62650 Cluster: 50S ribosomal protein L22P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L22P -
Nanoarchaeum equitans
Length = 174
Score = 39.5 bits (88), Expect = 0.035
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = +3
Query: 12 KARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAK- 188
K NL + K+ E A IR +PL+ A L+ V++K+ +PF R+N + + +
Sbjct: 12 KLYAHNLPISTKHAVEIAKMIRYLPLQLAKEMLQKVLDKELAVPFFRYNRDIPHRKKGQI 71
Query: 189 --QFGTTQGRWPKKSAEF 236
F GR+P+ + ++
Sbjct: 72 HPYFKIKHGRFPENATKW 89
>UniRef50_Q01BQ9 Cluster: 50S ribosomal protein L22-like; n=2;
Ostreococcus|Rep: 50S ribosomal protein L22-like -
Ostreococcus tauri
Length = 109
Score = 37.5 bits (83), Expect = 0.14
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +2
Query: 245 VIEDAESNA-DNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSE 421
VI+ A NA +N+ LD DRL+I + LRR + GR H+ + + E
Sbjct: 13 VIQSAVGNAVNNQGLDRDRLVIAWATVGKGQYLRRVSMHGRGRAGVMHRPRTHVAIAVEE 72
Query: 422 RADAVARVAPTDD 460
D RV DD
Sbjct: 73 NDDVERRVQIFDD 85
>UniRef50_Q7QWE5 Cluster: GLP_336_29458_28835; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_29458_28835 - Giardia lamblia
ATCC 50803
Length = 207
Score = 36.3 bits (80), Expect = 0.32
Identities = 22/60 (36%), Positives = 29/60 (48%)
Frame = -2
Query: 221 LGPATLCCAKLLCLSTATNAAVEATEWNTLFLFNHVFEVTNSTTERHLSDCHCGLICVLK 42
LGPATL A L A + VE E + L + V EV + + H D G +CVL+
Sbjct: 105 LGPATLVRAAPPGLRVAPDTLVELEEGDDLLVVQDVVEVGKGSLDPHSLDSSAGGVCVLE 164
>UniRef50_Q8ZWH7 Cluster: 50S ribosomal protein L22P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L22P -
Pyrobaculum aerophilum
Length = 168
Score = 35.5 bits (78), Expect = 0.56
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = +2
Query: 221 EIRRIPLAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSPCH 400
++ R L V+E+ E+NA + LDVDR++I H A++ + RA GR + +
Sbjct: 85 KVARRFLQVLENLENNARFRGLDVDRVVIVHAAAHKGFKIPNIMPRAFGRATRFDEQTVN 144
Query: 401 IEVCLSE 421
+E+ E
Sbjct: 145 VELVAVE 151
>UniRef50_Q1ISB7 Cluster: Ribosomal protein L22; n=1; Acidobacteria
bacterium Ellin345|Rep: Ribosomal protein L22 -
Acidobacteria bacterium (strain Ellin345)
Length = 167
Score = 34.7 bits (76), Expect = 0.99
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +2
Query: 212 LAQEIRRIPLAVIEDAE--SNADNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYM 385
+A I ++ + +++A SN LD+DRL + AN P ++R GR Y
Sbjct: 43 IAPAIYKLVHSAMDNANYLSNEKGLDLDLDRLYVKKAIANDGPRMKRIRPAPMGRAFRYQ 102
Query: 386 SSPCHIEVCLSERADAVARVAPT 454
HIE+ L+E+ A T
Sbjct: 103 RRISHIEISLAEKPGFQGSTATT 125
>UniRef50_Q0EW41 Cluster: Ribosomal protein L22; n=1; Mariprofundus
ferrooxydans PV-1|Rep: Ribosomal protein L22 -
Mariprofundus ferrooxydans PV-1
Length = 113
Score = 34.3 bits (75), Expect = 1.3
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 245 VIEDAESNAD-NKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSE 421
V++ A +NA+ N LDVD L + +A+ L+R + GR+ H+ V +SE
Sbjct: 52 VLKSAIANAEQNHGLDVDALFVSEAKADAGMTLKRFRPKGMGRMRKRFHRHSHLTVSVSE 111
Query: 422 R 424
R
Sbjct: 112 R 112
>UniRef50_UPI0000F2BD68 Cluster: PREDICTED: similar to keratinocytes
proline-rich protein; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to keratinocytes proline-rich protein
- Monodelphis domestica
Length = 752
Score = 33.9 bits (74), Expect = 1.7
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 301 TYRPHSGKSRALPTQTYIPCSRSHQPLHVVSLPHRSMSQRTRRC 432
TYR S R+ PT TY R QP + LP R S ++RC
Sbjct: 504 TYRSCSPPHRSWPTCTYCTPPRQSQPCYDSCLPRRPASGSSQRC 547
>UniRef50_Q68W83 Cluster: 50S ribosomal protein L22; n=11;
Alphaproteobacteria|Rep: 50S ribosomal protein L22 -
Rickettsia typhi
Length = 119
Score = 33.5 bits (73), Expect = 2.3
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 218 QEIRRIPLAVIEDAESNADNKT-LDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSP 394
+ I +I + A +NA+N LD+DRL+I ++ ++R RA GR
Sbjct: 47 KRIAKIVKDCLRSAVANAENNLGLDIDRLIITKATVGKSVVMKRIMPRAKGRATRINKFF 106
Query: 395 CHIEVCLSERAD 430
++++ ++E+ D
Sbjct: 107 SNLDITVTEKED 118
>UniRef50_Q9Z322 Cluster: NaPi-2 beta; n=1; Rattus norvegicus|Rep:
NaPi-2 beta - Rattus norvegicus (Rat)
Length = 327
Score = 32.3 bits (70), Expect = 5.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 245 LQEEFGGFLGPATLCCAKLLCLSTATNAAVEATEWNTLFL 126
+Q++F P +LC A L L T++ + EW+TL L
Sbjct: 288 VQQKFSTLFWPPSLCPAPLFGLGAPTDSTIIPPEWHTLLL 327
>UniRef50_A3UK34 Cluster: Putative uncharacterized protein; n=1;
Oceanicaulis alexandrii HTCC2633|Rep: Putative
uncharacterized protein - Oceanicaulis alexandrii
HTCC2633
Length = 194
Score = 32.3 bits (70), Expect = 5.3
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +2
Query: 206 GSLAQEIRRIPLAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRR-TYRAHGRINPY 382
G + ++ + +E+ E N D VD + + A +RR + GR+ PY
Sbjct: 118 GLSGRAVQLVSSWTLEEGE-NPDETRFTVDLAITGEVDEELAGIVRRVWVHFIQGRLKPY 176
Query: 383 MSSPCHIE 406
M + CH+E
Sbjct: 177 MEAGCHLE 184
>UniRef50_A0YAE7 Cluster: Putative uncharacterized protein; n=1;
marine gamma proteobacterium HTCC2143|Rep: Putative
uncharacterized protein - marine gamma proteobacterium
HTCC2143
Length = 204
Score = 32.3 bits (70), Expect = 5.3
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 161 RRWSLCSSKAVWHNTGSLAQEIRRIPLAVIEDAESNADNKTLDVDRLLI 307
+RW+ S++ +W NT S E ++ + + D KT+ DRLLI
Sbjct: 122 KRWAKWSNQLIWENTFSGRIEDKQYAIQIFNDHIERV-KKTISADRLLI 169
>UniRef50_Q92GX1 Cluster: 50S ribosomal protein L22; n=19;
Alphaproteobacteria|Rep: 50S ribosomal protein L22 -
Rickettsia conorii
Length = 119
Score = 32.3 bits (70), Expect = 5.3
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 218 QEIRRIPLAVIEDAESNADNKT-LDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSP 394
+ I ++ ++ A +NA+N LD+DRL++ +A ++R RA GR
Sbjct: 47 KRIAKVVKDCLQSAVANAENNLGLDIDRLVVTKATVGKALVMKRVMPRAKGRATRINKFF 106
Query: 395 CHIEVCLSERAD 430
++ + ++E+ D
Sbjct: 107 SNLYITVTEKED 118
>UniRef50_UPI0000F1E090 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 587
Score = 31.9 bits (69), Expect = 7.0
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKN 116
+SC + N ++H K T ETA A+++ L A R L +
Sbjct: 337 RSCLSSFQNYQLHLKKTKETAQALKQKRLSEAARILSS 374
>UniRef50_Q2S563 Cluster: Putative uncharacterized protein; n=1;
Salinibacter ruber DSM 13855|Rep: Putative
uncharacterized protein - Salinibacter ruber (strain DSM
13855)
Length = 101
Score = 31.9 bits (69), Expect = 7.0
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2
Query: 221 EIRRIPLAVIEDAESNADNKTLDVDRLLIDHIQANRA 331
E RR AV+EDAE+ AD+ D+D L+ + QA++A
Sbjct: 61 EGRRNSAAVVEDAETRADHIRDDIDALMEELRQASQA 97
>UniRef50_A5KRQ6 Cluster: Ribosomal protein L22; n=1; candidate
division TM7 genomosp. GTL1|Rep: Ribosomal protein L22 -
candidate division TM7 genomosp. GTL1
Length = 132
Score = 31.9 bits (69), Expect = 7.0
Identities = 33/98 (33%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +2
Query: 131 RVYSIPSLQRRRWSLCSSKAVWHNTGSLAQEIRRIPLA-VIEDAESNADNKT-LDVDRLL 304
+V I SL R R S+ + + NT A + P+A V+ A +NA N LD L
Sbjct: 20 KVGLIASLIRGR-SVADALLILENTPKRAAK----PVAKVVASARANAVNTHGLDSKSLR 74
Query: 305 IDHIQANRAPCLRRRTYRAHGRINPYMSSPCHIEVCLS 418
I I + L+R A GR PY HI V +S
Sbjct: 75 IQTIHVSPGQHLKRYRAAAMGRALPYQKRTSHINVVVS 112
>UniRef50_Q8DM81 Cluster: Tlr0242 protein; n=1; Synechococcus
elongatus|Rep: Tlr0242 protein - Synechococcus elongatus
(Thermosynechococcus elongatus)
Length = 365
Score = 31.5 bits (68), Expect = 9.2
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -1
Query: 360 ARYVRLRRQGARFA*MWSISSLSTSKVLLSAFDSASSITARGIRRISWAS 211
ARY+R RR A A MW +++L+ L++ F ++ I +AS
Sbjct: 73 ARYLRTRRPDALIAAMWPLTALAPIAALIAGFRGKVLVSEHSILSQQYAS 122
>UniRef50_Q3LVW9 Cluster: Ribosomal protein L17; n=1; Bigelowiella
natans|Rep: Ribosomal protein L17 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 152
Score = 31.5 bits (68), Expect = 9.2
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 266 NADNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSPCHIEV 409
N ++ + +D ID I NR R+ YRA+GR N + C I +
Sbjct: 99 NKIDERVVLDAYYIDSIIINRGKKYLRKIYRAYGRANNIIHQQCSITI 146
>UniRef50_A7PWG6 Cluster: Chromosome chr8 scaffold_34, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr8 scaffold_34, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 841
Score = 31.5 bits (68), Expect = 9.2
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Frame = -1
Query: 357 RYVRLRRQGARFA*MWSISSLSTSKVLLSAFDSASSITARGIRRISWASDPVL----CQT 190
++ RLR + RF WS+S + + L+ +D + R + R S + P+L Q
Sbjct: 80 KHYRLRVEADRFQKDWSVSEVVERLLKLNHWDDVEGLLNRWVGRFSRKNFPLLIREITQI 139
Query: 189 ALLEHSDQ 166
LEHS Q
Sbjct: 140 GSLEHSVQ 147
>UniRef50_Q855W9 Cluster: Gp103; n=1; Mycobacterium phage
Barnyard|Rep: Gp103 - Mycobacterium phage Barnyard
Length = 123
Score = 31.5 bits (68), Expect = 9.2
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 308 DHIQANRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSERAD 430
D+ A+ P R +YR HG+ P + S CH+E +E AD
Sbjct: 82 DYEHAHSEP--REPSYRVHGKRKPKLCSLCHMEHAGAEDAD 120
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 467,469,466
Number of Sequences: 1657284
Number of extensions: 8893291
Number of successful extensions: 23907
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 23303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23898
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24771286585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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