Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1095X
(462 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA ... 135 6e-32
BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17 p... 135 6e-32
BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17 p... 135 6e-32
BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17 p... 135 6e-32
BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17 p... 135 6e-32
BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17 p... 135 6e-32
AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17 p... 135 6e-32
AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens ... 73 4e-13
AL137265-1|CAB70664.1| 992|Homo sapiens hypothetical protein pr... 30 4.5
AL117632-1|CAB56023.1| 596|Homo sapiens hypothetical protein pr... 30 4.5
AB028975-1|BAA83004.2| 1456|Homo sapiens KIAA1052 protein protein. 30 4.5
AY129010-1|AAM98753.1| 198|Homo sapiens unknown protein. 29 7.8
>X53777-1|CAA37793.1| 184|Homo sapiens protein ( Human L23 mRNA for
putative ribosomal protein. ).
Length = 184
Score = 135 bits (327), Expect = 6e-32
Identities = 59/78 (75%), Positives = 70/78 (89%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQ 182
KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PFRR+NGGVGRCAQ
Sbjct: 13 KSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQ 72
Query: 183 AKQFGTTQGRWPKKSAEF 236
AKQ+G TQGRWPKKSAEF
Sbjct: 73 AKQWGWTQGRWPKKSAEF 90
Score = 100 bits (240), Expect = 2e-21
Identities = 48/90 (53%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Frame = +2
Query: 176 CSSKAVWHNT-GSLAQEIRRIPLAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRT 352
C+ W T G ++ L ++++AESNA+ K LDVD L+I+HIQ N+AP +RRRT
Sbjct: 70 CAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRT 129
Query: 353 YRAHGRINPYMSSPCHIEVCLSERADAVAR 442
YRAHGRINPYMSSPCHIE+ L+E+ V +
Sbjct: 130 YRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>BC106031-1|AAI06032.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 135 bits (327), Expect = 6e-32
Identities = 59/78 (75%), Positives = 70/78 (89%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQ 182
KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PFRR+NGGVGRCAQ
Sbjct: 13 KSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQ 72
Query: 183 AKQFGTTQGRWPKKSAEF 236
AKQ+G TQGRWPKKSAEF
Sbjct: 73 AKQWGWTQGRWPKKSAEF 90
Score = 100 bits (240), Expect = 2e-21
Identities = 48/90 (53%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Frame = +2
Query: 176 CSSKAVWHNT-GSLAQEIRRIPLAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRT 352
C+ W T G ++ L ++++AESNA+ K LDVD L+I+HIQ N+AP +RRRT
Sbjct: 70 CAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRT 129
Query: 353 YRAHGRINPYMSSPCHIEVCLSERADAVAR 442
YRAHGRINPYMSSPCHIE+ L+E+ V +
Sbjct: 130 YRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>BC066324-1|AAH66324.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 135 bits (327), Expect = 6e-32
Identities = 59/78 (75%), Positives = 70/78 (89%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQ 182
KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PFRR+NGGVGRCAQ
Sbjct: 13 KSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQ 72
Query: 183 AKQFGTTQGRWPKKSAEF 236
AKQ+G TQGRWPKKSAEF
Sbjct: 73 AKQWGWTQGRWPKKSAEF 90
Score = 97.5 bits (232), Expect = 2e-20
Identities = 47/90 (52%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Frame = +2
Query: 176 CSSKAVWHNT-GSLAQEIRRIPLAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRT 352
C+ W T G ++ L ++++AESNA+ K LDVD L+I+HIQ N+AP +RRRT
Sbjct: 70 CAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRT 129
Query: 353 YRAHGRINPYMSSPCHIEVCLSERADAVAR 442
YRA GRINPYMSSPCHIE+ L+E+ V +
Sbjct: 130 YRARGRINPYMSSPCHIEMILTEKEQIVPK 159
>BC066323-1|AAH66323.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 135 bits (327), Expect = 6e-32
Identities = 59/78 (75%), Positives = 70/78 (89%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQ 182
KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PFRR+NGGVGRCAQ
Sbjct: 13 KSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQ 72
Query: 183 AKQFGTTQGRWPKKSAEF 236
AKQ+G TQGRWPKKSAEF
Sbjct: 73 AKQWGWTQGRWPKKSAEF 90
Score = 100 bits (240), Expect = 2e-21
Identities = 48/90 (53%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Frame = +2
Query: 176 CSSKAVWHNT-GSLAQEIRRIPLAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRT 352
C+ W T G ++ L ++++AESNA+ K LDVD L+I+HIQ N+AP +RRRT
Sbjct: 70 CAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRT 129
Query: 353 YRAHGRINPYMSSPCHIEVCLSERADAVAR 442
YRAHGRINPYMSSPCHIE+ L+E+ V +
Sbjct: 130 YRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>BC017831-1|AAH17831.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 135 bits (327), Expect = 6e-32
Identities = 59/78 (75%), Positives = 70/78 (89%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQ 182
KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PFRR+NGGVGRCAQ
Sbjct: 13 KSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQ 72
Query: 183 AKQFGTTQGRWPKKSAEF 236
AKQ+G TQGRWPKKSAEF
Sbjct: 73 AKQWGWTQGRWPKKSAEF 90
Score = 100 bits (240), Expect = 2e-21
Identities = 48/90 (53%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Frame = +2
Query: 176 CSSKAVWHNT-GSLAQEIRRIPLAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRT 352
C+ W T G ++ L ++++AESNA+ K LDVD L+I+HIQ N+AP +RRRT
Sbjct: 70 CAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRT 129
Query: 353 YRAHGRINPYMSSPCHIEVCLSERADAVAR 442
YRAHGRINPYMSSPCHIE+ L+E+ V +
Sbjct: 130 YRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>BC000502-1|AAH00502.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 135 bits (327), Expect = 6e-32
Identities = 59/78 (75%), Positives = 70/78 (89%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQ 182
KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PFRR+NGGVGRCAQ
Sbjct: 13 KSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQ 72
Query: 183 AKQFGTTQGRWPKKSAEF 236
AKQ+G TQGRWPKKSAEF
Sbjct: 73 AKQWGWTQGRWPKKSAEF 90
Score = 100 bits (240), Expect = 2e-21
Identities = 48/90 (53%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Frame = +2
Query: 176 CSSKAVWHNT-GSLAQEIRRIPLAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRT 352
C+ W T G ++ L ++++AESNA+ K LDVD L+I+HIQ N+AP +RRRT
Sbjct: 70 CAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRT 129
Query: 353 YRAHGRINPYMSSPCHIEVCLSERADAVAR 442
YRAHGRINPYMSSPCHIE+ L+E+ V +
Sbjct: 130 YRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>AB061824-1|BAB79462.1| 184|Homo sapiens ribosomal protein L17
protein.
Length = 184
Score = 135 bits (327), Expect = 6e-32
Identities = 59/78 (75%), Positives = 70/78 (89%)
Frame = +3
Query: 3 KSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQ 182
KSCK+RGSNLRVHFKNT ETA AI+ M +R+A +YLK+V +K+C+PFRR+NGGVGRCAQ
Sbjct: 13 KSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQ 72
Query: 183 AKQFGTTQGRWPKKSAEF 236
AKQ+G TQGRWPKKSAEF
Sbjct: 73 AKQWGWTQGRWPKKSAEF 90
Score = 100 bits (240), Expect = 2e-21
Identities = 48/90 (53%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Frame = +2
Query: 176 CSSKAVWHNT-GSLAQEIRRIPLAVIEDAESNADNKTLDVDRLLIDHIQANRAPCLRRRT 352
C+ W T G ++ L ++++AESNA+ K LDVD L+I+HIQ N+AP +RRRT
Sbjct: 70 CAQAKQWGWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRT 129
Query: 353 YRAHGRINPYMSSPCHIEVCLSERADAVAR 442
YRAHGRINPYMSSPCHIE+ L+E+ V +
Sbjct: 130 YRAHGRINPYMSSPCHIEMILTEKEQIVPK 159
>AK130593-1|BAC85391.1| 136|Homo sapiens protein ( Homo sapiens
cDNA FLJ27083 fis, clone SPL03425. ).
Length = 136
Score = 73.3 bits (172), Expect = 4e-13
Identities = 31/55 (56%), Positives = 44/55 (80%)
Frame = +2
Query: 260 ESNADNKTLDVDRLLIDHIQANRAPCLRRRTYRAHGRINPYMSSPCHIEVCLSER 424
+SNA+ K LD+D L+I+ IQ N+AP + TYRAHG+INPY++S CHIE+ L+E+
Sbjct: 35 QSNAEFKVLDIDSLIIEPIQVNKAPKMHCWTYRAHGQINPYVTSACHIEMILTEK 89
>AL137265-1|CAB70664.1| 992|Homo sapiens hypothetical protein
protein.
Length = 992
Score = 29.9 bits (64), Expect = 4.5
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +2
Query: 149 SLQRRRWSLCSSKAVWHNTGSLAQEIRRIP--LAVIEDAESNADNKTLDVDRL 301
S++RR+ +L +++ W + + AQE+ + P + +ED N + +T +D +
Sbjct: 897 SMRRRQTALKAAQQHWRHELASAQEVAKDPPGIKALEDMRKNLEKETRHLDEM 949
>AL117632-1|CAB56023.1| 596|Homo sapiens hypothetical protein
protein.
Length = 596
Score = 29.9 bits (64), Expect = 4.5
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +2
Query: 149 SLQRRRWSLCSSKAVWHNTGSLAQEIRRIP--LAVIEDAESNADNKTLDVDRL 301
S++RR+ +L +++ W + + AQE+ + P + +ED N + +T +D +
Sbjct: 259 SMRRRQTALKAAQQHWRHELASAQEVAKDPPGIKALEDMRKNLEKETRHLDEM 311
>AB028975-1|BAA83004.2| 1456|Homo sapiens KIAA1052 protein protein.
Length = 1456
Score = 29.9 bits (64), Expect = 4.5
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = +2
Query: 149 SLQRRRWSLCSSKAVWHNTGSLAQEIRRIP--LAVIEDAESNADNKTLDVDRL 301
S++RR+ +L +++ W + + AQE+ + P + +ED N + +T +D +
Sbjct: 1127 SMRRRQTALKAAQQHWRHELASAQEVAKDPPGIKALEDMRKNLEKETRHLDEM 1179
>AY129010-1|AAM98753.1| 198|Homo sapiens unknown protein.
Length = 198
Score = 29.1 bits (62), Expect = 7.8
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 307 RPHSGKSRALPTQTYIPCSRSHQPLHVVSLPHR-SMSQRTRR 429
R HS S+ L +Q++ P SRSH P PH S S R+ R
Sbjct: 95 RAHSSWSQNLHSQSHSPHSRSHSPHSRSHSPHSWSHSLRSSR 136
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,391,734
Number of Sequences: 237096
Number of extensions: 1360056
Number of successful extensions: 2890
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2890
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3929066862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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