Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1095X
         (462 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    25   0.40 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   0.92 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   0.92 
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   3.7  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   8.5  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 25.0 bits (52), Expect = 0.40
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = -2

Query: 140 NTLFLFNHVFEVTNSTTERHLSDCHCGLICVLKV 39
           N  FL + +F+         LSD   GL C + V
Sbjct: 312 NARFLMDSMFDFAERVNSLRLSDAELGLFCSVVV 345


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = +2

Query: 260 ESNADNKTLDVDRLLIDHIQANRAP 334
           ++N  + TLD++  L++++QAN  P
Sbjct: 68  QTNHISLTLDLEYELVENLQANEKP 92


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = +2

Query: 260 ESNADNKTLDVDRLLIDHIQANRAP 334
           ++N  + TLD++  L++++QAN  P
Sbjct: 106 QTNHISLTLDLEYELVENLQANEKP 130


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 25  QTSVFTLRTHMRPQWQSE 78
           QT VF L TH    W S+
Sbjct: 171 QTIVFHLETHPNVTWYSQ 188


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 116 VFEVTNSTTERHLSDCH 66
           V  +T  T ER+++ CH
Sbjct: 142 VLTITAFTVERYIAICH 158


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,949
Number of Sequences: 438
Number of extensions: 2625
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12312900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)