Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1094
         (815 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   3.8  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    22   6.7  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   6.7  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   8.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.9  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +2

Query: 329  GEQVHFRATTRRHYYCSKKLKGCRARIFLSKDKTEIV 439
            G   H  A+T  +  C+KK +       L K   EIV
Sbjct: 1351 GTIAHILASTELNLCCTKKKEELSPNALLDKQAVEIV 1387


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +2

Query: 329  GEQVHFRATTRRHYYCSKKLKGCRARIFLSKDKTEIV 439
            G   H  A+T  +  C+KK +       L K   EIV
Sbjct: 1351 GTIAHILASTELNLCCTKKKEELSPNALLDKQAVEIV 1387


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +2

Query: 329  GEQVHFRATTRRHYYCSKKLKGCRARIFLSKDKTEIV 439
            G   H  A+T  +  C+KK +       L K   EIV
Sbjct: 1351 GTIAHILASTELNLCCTKKKEELSPNALLDKQAVEIV 1387


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = +2

Query: 329  GEQVHFRATTRRHYYCSKKLKGCRARIFLSKDKTEIV 439
            G   H  A+T  +  C+KK +       L K   EIV
Sbjct: 1351 GTIAHILASTELNLCCTKKKEELSPNALLDKQAVEIV 1387


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 156 IFIVIPHTLINKLWFHFGSDS 94
           IFI+IP TL +  +F  G +S
Sbjct: 501 IFIIIPVTLTSVCYFMIGLNS 521


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -3

Query: 57  VFCRTRGTCFQWIYAFS 7
           VFCR R   + + YAFS
Sbjct: 112 VFCRDRVNPYLFYYAFS 128


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 567 ALSSTISMSFNAITKETKKNFFSYLGNVE 653
           A+++   +    I+ ETK N F  +GN++
Sbjct: 389 AVTAKFPIYLYRISVETKLNVFKRIGNIK 417


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -3

Query: 774 WRFRPVVDSAKHCYC*GQC*QHSRFEPRE 688
           WR + VV+   HC+    C   S+  P E
Sbjct: 480 WREKCVVEGNPHCWVPHSCKLTSKEVPGE 508


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 344 SVLVRHQQSPGIRQTYEFDILCIAD 270
           SV+ R +    IR+  EFD+ C+++
Sbjct: 458 SVINRWKFIEFIRKVLEFDVKCVSN 482


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,519
Number of Sequences: 336
Number of extensions: 3756
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)