Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1094
(815 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118752-1|AAM50612.1| 86|Drosophila melanogaster GH07769p pro... 31 1.4
AJ586731-1|CAE52500.1| 94|Drosophila melanogaster Mod(mdg4)-52... 31 1.4
BT015237-1|AAT94466.1| 1044|Drosophila melanogaster RE03681p pro... 30 3.3
AE014298-1828|AAF48216.1| 561|Drosophila melanogaster CG4395-PA... 30 3.3
AY058669-1|AAL13898.1| 1032|Drosophila melanogaster LD37985p pro... 30 4.4
AE014296-44|AAN11426.1| 1032|Drosophila melanogaster CG16940-PB,... 30 4.4
AE014296-43|AAF47351.2| 1032|Drosophila melanogaster CG16940-PA,... 30 4.4
AE014296-42|AAN11425.1| 1044|Drosophila melanogaster CG16940-PC,... 30 4.4
AY069561-1|AAL39706.1| 764|Drosophila melanogaster LD29352p pro... 29 7.6
AE014298-2121|AAN09659.2| 731|Drosophila melanogaster CG5877-PB... 29 7.6
AE014298-2120|AAF48437.1| 984|Drosophila melanogaster CG5877-PA... 29 7.6
>AY118752-1|AAM50612.1| 86|Drosophila melanogaster GH07769p
protein.
Length = 86
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +2
Query: 323 VDGEQVHFRATTRRHYY--CSKKLKGCRARIFLSKDKTEIVLMDNTHNHT 466
+DG + T R Y C+ CRAR L+ D ++ + + HNH+
Sbjct: 25 IDGYRFVIGTTNLRRTYLKCANFRSNCRARAILNTDTNKVRMRHDRHNHS 74
>AJ586731-1|CAE52500.1| 94|Drosophila melanogaster Mod(mdg4)-52.4
protein.
Length = 94
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +2
Query: 323 VDGEQVHFRATTRRHYY--CSKKLKGCRARIFLSKDKTEIVLMDNTHNHT 466
+DG + T R Y C+ CRAR L+ D ++ + + HNH+
Sbjct: 33 IDGYRFVIGTTNLRRTYLKCANFRSNCRARAILNTDTNKVRMRHDRHNHS 82
>BT015237-1|AAT94466.1| 1044|Drosophila melanogaster RE03681p
protein.
Length = 1044
Score = 30.3 bits (65), Expect = 3.3
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -2
Query: 373 VIMPSGSCAKVYLFAINSRRELDKRMNLISCASPT 269
V++ S +C K ++ AI R EL + + IS +PT
Sbjct: 412 VVISSDNCPKAFVIAITKRTELHQIVGTISFTNPT 446
>AE014298-1828|AAF48216.1| 561|Drosophila melanogaster CG4395-PA
protein.
Length = 561
Score = 30.3 bits (65), Expect = 3.3
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 212 LVLMALQLEMLIFLG*RWSSRRCTRYQIH 298
L L+AL + ++IFLG + S RCTR +IH
Sbjct: 204 LSLLALLISIIIFLG--FKSLRCTRIRIH 230
>AY058669-1|AAL13898.1| 1032|Drosophila melanogaster LD37985p
protein.
Length = 1032
Score = 29.9 bits (64), Expect = 4.4
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -2
Query: 373 VIMPSGSCAKVYLFAINSRRELDKRMNLISCASPT 269
V++ S +C K ++ AI R EL + + IS +PT
Sbjct: 400 VVISSDNCPKAFVIAITKRTELRQIVGTISFTNPT 434
>AE014296-44|AAN11426.1| 1032|Drosophila melanogaster CG16940-PB,
isoform B protein.
Length = 1032
Score = 29.9 bits (64), Expect = 4.4
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -2
Query: 373 VIMPSGSCAKVYLFAINSRRELDKRMNLISCASPT 269
V++ S +C K ++ AI R EL + + IS +PT
Sbjct: 400 VVISSDNCPKAFVIAITKRTELRQIVGTISFTNPT 434
>AE014296-43|AAF47351.2| 1032|Drosophila melanogaster CG16940-PA,
isoform A protein.
Length = 1032
Score = 29.9 bits (64), Expect = 4.4
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -2
Query: 373 VIMPSGSCAKVYLFAINSRRELDKRMNLISCASPT 269
V++ S +C K ++ AI R EL + + IS +PT
Sbjct: 400 VVISSDNCPKAFVIAITKRTELRQIVGTISFTNPT 434
>AE014296-42|AAN11425.1| 1044|Drosophila melanogaster CG16940-PC,
isoform C protein.
Length = 1044
Score = 29.9 bits (64), Expect = 4.4
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -2
Query: 373 VIMPSGSCAKVYLFAINSRRELDKRMNLISCASPT 269
V++ S +C K ++ AI R EL + + IS +PT
Sbjct: 412 VVISSDNCPKAFVIAITKRTELRQIVGTISFTNPT 446
>AY069561-1|AAL39706.1| 764|Drosophila melanogaster LD29352p
protein.
Length = 764
Score = 29.1 bits (62), Expect = 7.6
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +2
Query: 20 IHWKQVPLVLQKTNL*RYQTKMRTMLSLPK--WNQSLLMRVCGMTMKMARTMTKLITERT 193
I+W+ + L KTN ++K ++++ + W++SLLM + ++ L+TE+
Sbjct: 689 IYWRLYMIALSKTNASFRRSKEVLIMAMDECPWDKSLLMEGAKVLPVKLASLQDLMTEKE 748
Query: 194 ILIW 205
I I+
Sbjct: 749 IRIF 752
>AE014298-2121|AAN09659.2| 731|Drosophila melanogaster CG5877-PB,
isoform B protein.
Length = 731
Score = 29.1 bits (62), Expect = 7.6
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +2
Query: 20 IHWKQVPLVLQKTNL*RYQTKMRTMLSLPK--WNQSLLMRVCGMTMKMARTMTKLITERT 193
I+W+ + L KTN ++K ++++ + W++SLLM + ++ L+TE+
Sbjct: 656 IYWRLYMIALSKTNASFRRSKEVLIMAMDECPWDKSLLMEGAKVLPVKLASLQDLMTEKE 715
Query: 194 ILIW 205
I I+
Sbjct: 716 IRIF 719
>AE014298-2120|AAF48437.1| 984|Drosophila melanogaster CG5877-PA,
isoform A protein.
Length = 984
Score = 29.1 bits (62), Expect = 7.6
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +2
Query: 20 IHWKQVPLVLQKTNL*RYQTKMRTMLSLPK--WNQSLLMRVCGMTMKMARTMTKLITERT 193
I+W+ + L KTN ++K ++++ + W++SLLM + ++ L+TE+
Sbjct: 909 IYWRLYMIALSKTNASFRRSKEVLIMAMDECPWDKSLLMEGAKVLPVKLASLQDLMTEKE 968
Query: 194 ILIW 205
I I+
Sbjct: 969 IRIF 972
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,621,373
Number of Sequences: 53049
Number of extensions: 684987
Number of successful extensions: 2087
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2087
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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