Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1092
(600 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124; Eukar... 118 1e-25
UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17; Eukary... 117 2e-25
UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18, putat... 104 2e-21
UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135, w... 101 1e-20
UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8; Trypano... 100 5e-20
UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8; Eukaryo... 96 6e-19
UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5; Dikarya... 95 1e-18
UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S r... 93 3e-18
UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, who... 91 1e-17
UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L1... 85 1e-15
UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia lam... 85 2e-15
UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1; ... 84 2e-15
UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal ... 84 3e-15
UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal ... 77 2e-13
UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal ... 75 2e-12
UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, wh... 51 2e-05
UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_Q8SS76 Cluster: 60S RIBOSOMAL PROTEIN L18; n=1; Encepha... 43 0.005
UniRef50_Q580C7 Cluster: Putative uncharacterized protein; n=1; ... 40 0.045
UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7; Thermo... 37 0.32
UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillar... 36 0.55
UniRef50_UPI0000E4A0C9 Cluster: PREDICTED: similar to tethering ... 33 3.9
UniRef50_UPI0000E21303 Cluster: PREDICTED: similar to MGC11257 p... 33 3.9
UniRef50_UPI0000D56F37 Cluster: PREDICTED: similar to CG4917-PA,... 33 5.1
UniRef50_Q4RHJ6 Cluster: Chromosome 19 SCAF15045, whole genome s... 33 6.8
UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2; Thermoprot... 33 6.8
UniRef50_Q1N519 Cluster: Pentapeptide repeat family protein; n=1... 32 9.0
UniRef50_Q0SUG4 Cluster: CRISPR-associated protein Csx8, putativ... 32 9.0
UniRef50_A7NYY2 Cluster: Chromosome chr6 scaffold_3, whole genom... 32 9.0
UniRef50_Q4UCQ7 Cluster: Putative uncharacterized protein; n=2; ... 32 9.0
UniRef50_Q6CXL9 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 32 9.0
UniRef50_A1DA31 Cluster: Putative uncharacterized protein; n=1; ... 32 9.0
>UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124;
Eukaryota|Rep: 60S ribosomal protein L18 - Homo sapiens
(Human)
Length = 188
Score = 118 bits (283), Expect = 1e-25
Identities = 55/90 (61%), Positives = 67/90 (74%)
Frame = +3
Query: 255 GTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 434
GT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFDQLAL +P G TVL+ G R
Sbjct: 84 GTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFDQLALDSPKGCGTVLLSGPR 143
Query: 435 NAR*AVRHFGPAPGAPRSHTKPYVRPRDMK 524
R RHFG APG P SHTKPYVR + K
Sbjct: 144 KGREVYRHFGKAPGTPHSHTKPYVRSKGRK 173
Score = 96.3 bits (229), Expect = 5e-19
Identities = 48/84 (57%), Positives = 55/84 (65%)
Frame = +1
Query: 7 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 186
MG+DI H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP
Sbjct: 1 MGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPP 60
Query: 187 ISVSRLARHMKKPTREGLIAVVVG 258
+S+SR+ R MK P RE AVVVG
Sbjct: 61 LSLSRMIRKMKLPGRENKTAVVVG 84
>UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17;
Eukaryota|Rep: 60S ribosomal protein L18 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 183
Score = 117 bits (282), Expect = 2e-25
Identities = 57/90 (63%), Positives = 67/90 (74%)
Frame = +3
Query: 255 GTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 434
G VT+D+R+Y +P + V AL TE ARARI AGGE LTFDQLALR P TVL++G +
Sbjct: 80 GAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALRLPL-TDTVLLRGPK 138
Query: 435 NAR*AVRHFGPAPGAPRSHTKPYVRPRDMK 524
NAR AV+HFGPAPG P SHTKPYVR + K
Sbjct: 139 NAREAVKHFGPAPGVPHSHTKPYVRSKGRK 168
Score = 65.7 bits (153), Expect = 8e-10
Identities = 32/75 (42%), Positives = 48/75 (64%)
Frame = +1
Query: 34 DRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARH 213
++K +RT KS DI T++ FN ++L+RLFMS++NRPP+S+SRL ++
Sbjct: 8 NKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLSLSRLIKY 67
Query: 214 MKKPTREGLIAVVVG 258
M+ +EG I VVVG
Sbjct: 68 MQ--GKEGKIGVVVG 80
>UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18,
putative; n=4; Plasmodium (Vinckeia)|Rep: Eukaryotic
ribosomal protein L18, putative - Plasmodium yoelii
yoelii
Length = 243
Score = 104 bits (249), Expect = 2e-21
Identities = 50/90 (55%), Positives = 62/90 (68%)
Frame = +3
Query: 255 GTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 434
G++T+D RL+ M V AL TE AR RI+ AGGE LTFDQLALR PTGK +L++G
Sbjct: 139 GSITDDKRLFSCRNMKVCALRFTETARKRIVDAGGECLTFDQLALRYPTGKDCILLRGPT 198
Query: 435 NAR*AVRHFGPAPGAPRSHTKPYVRPRDMK 524
AR A +HFG APG P+S +PYVR + K
Sbjct: 199 KARTAEKHFGSAPGRPKSKARPYVRSKGRK 228
Score = 45.6 bits (103), Expect = 0.001
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +1
Query: 1 VKMGIDI-NHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRIN 177
+ MGID+ N +K R + S++ T+ FN+I+ +RL M +
Sbjct: 55 INMGIDLKNVGRIKKHGRKNLVSKNPYLRLLVKLYRFLARRTDVNFNKIIAKRLIMPKRF 114
Query: 178 RPPISVSRLARHMKKPTREGLIAVVVG 258
RPP+S+S+L +HM + +AVVVG
Sbjct: 115 RPPLSLSKLQQHMS--NNQNSVAVVVG 139
>UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135,
whole genome shotgun sequence; n=3; Eukaryota|Rep:
Chromosome undetermined scaffold_135, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 393
Score = 101 bits (242), Expect = 1e-20
Identities = 50/84 (59%), Positives = 61/84 (72%)
Frame = +3
Query: 255 GTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 434
GTVT+D RL +PK+ V AL TE AR RILAAGG+ LTFDQLA + PTG T+L++G +
Sbjct: 300 GTVTDDARLLTVPKLNVCALRFTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLRGPK 359
Query: 435 NAR*AVRHFGPAPGAPRSHTKPYV 506
R A++HFG A G P SH KPYV
Sbjct: 360 -VREALKHFGRAAGLPGSHAKPYV 382
Score = 38.3 bits (85), Expect = 0.14
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Frame = +1
Query: 1 VKMGIDINHKH--DRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRI 174
++ G+D K R V R +V S ++ T+++FN VLRRL +R
Sbjct: 214 IQQGVDAYKKTRVQRNVGR-KVTSTNLYLKLLIKLYKFLARRTDSQFNATVLRRLQSTRT 272
Query: 175 NRPPISVSRLARHMKKPTREGLIAVVVG 258
R PISVSRL + + + VVVG
Sbjct: 273 ARYPISVSRLVKQINTAKDKTRTLVVVG 300
>UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L18 -
Leishmania major
Length = 198
Score = 99.5 bits (237), Expect = 5e-20
Identities = 49/87 (56%), Positives = 63/87 (72%)
Frame = +3
Query: 255 GTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 434
G V +DVR+ +IP M V AL ++ AR I+AAGGE LTFDQLA+ APTGK T L++G++
Sbjct: 91 GDVLDDVRMARIPAMRVCALRFSKSARQSIVAAGGECLTFDQLAMIAPTGKNTYLLRGRK 150
Query: 435 NAR*AVRHFGPAPGAPRSHTKPYVRPR 515
+ R +VRHFG A G P SH+KPY R
Sbjct: 151 SGRESVRHFG-ASGVPGSHSKPYATNR 176
Score = 40.3 bits (90), Expect = 0.034
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 6/52 (11%)
Frame = +1
Query: 121 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKK------PTREGLIAVVVG 258
T++ FN++V +RL SR NR PIS+SR+A MK+ ++ IAVVVG
Sbjct: 40 TSSGFNKVVYQRLIKSRSNRAPISLSRIAVVMKRKAVFTAKSKAAPIAVVVG 91
>UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8;
Eukaryota|Rep: 60S ribosomal protein L18 - Theileria
parva
Length = 184
Score = 95.9 bits (228), Expect = 6e-19
Identities = 48/90 (53%), Positives = 62/90 (68%)
Frame = +3
Query: 255 GTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 434
GTVTND R+ +PK++V AL VTE AR RILA+GGE+LTFDQL R+PTG + L++G
Sbjct: 83 GTVTNDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPTGSRCTLLRGAT 142
Query: 435 NAR*AVRHFGPAPGAPRSHTKPYVRPRDMK 524
AR AV+HF + + KPYVR + K
Sbjct: 143 KAREAVKHF---RNEVKGNPKPYVRSKGRK 169
Score = 43.2 bits (97), Expect = 0.005
Identities = 22/46 (47%), Positives = 33/46 (71%)
Frame = +1
Query: 121 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVG 258
T+ FN++VL+RL M R + P+S+S+L++HM+K R AVVVG
Sbjct: 40 TDHSFNKVVLKRLLMPRRFKAPLSLSKLSKHMEK--RPDNTAVVVG 83
>UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5;
Dikarya|Rep: 60S ribosomal protein L18 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 186
Score = 94.7 bits (225), Expect = 1e-18
Identities = 43/73 (58%), Positives = 57/73 (78%)
Frame = +3
Query: 255 GTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 434
GTVT+D R+++ PK TVAAL T ARA+I+ AGGE +T DQLA+RAP G+ T++++G R
Sbjct: 85 GTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGECITLDQLAVRAPKGQNTLILRGPR 144
Query: 435 NAR*AVRHFGPAP 473
N+R AVRHFG P
Sbjct: 145 NSREAVRHFGMGP 157
Score = 65.7 bits (153), Expect = 8e-10
Identities = 36/85 (42%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +1
Query: 7 MGIDINHK-HDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRP 183
MGID K H R RT KS ++ T+A FN++VL+ LF+S+INRP
Sbjct: 1 MGIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRP 60
Query: 184 PISVSRLARHMKKPTREGLIAVVVG 258
P+SVSR+AR +K+ VVVG
Sbjct: 61 PVSVSRIARALKQEGAANKTVVVVG 85
>UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S
ribosomal protein L18; n=2; Homo sapiens|Rep: Similar to
ribosomal protein L18; 60S ribosomal protein L18 - Homo
sapiens (Human)
Length = 224
Score = 93.5 bits (222), Expect = 3e-18
Identities = 46/90 (51%), Positives = 59/90 (65%)
Frame = +3
Query: 255 GTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 434
GT+T+DV + ++PK+ V AL VT +AR+ I+ GG+ LTFDQLAL +P TVL+ G R
Sbjct: 120 GTITDDVWVQEVPKLKVCALGVTSRARSHIVRVGGKNLTFDQLALDSPKVCSTVLLSGPR 179
Query: 435 NAR*AVRHFGPAPGAPRSHTKPYVRPRDMK 524
R HF A G P SHTKPYVR + K
Sbjct: 180 KGREVYWHFDKALGTPHSHTKPYVRSKGRK 209
Score = 33.5 bits (73), Expect = 3.9
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +1
Query: 175 NRPPISVSRLARHMKKPTREGLIAVVVG 258
N+PP+S+SR+ MK P +E AVVVG
Sbjct: 93 NQPPLSLSRMIPKMKLPGQENKTAVVVG 120
>UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=6; Eukaryota|Rep: Chromosome
undetermined scaffold_9, whole genome shotgun sequence -
Paramecium tetraurelia
Length = 469
Score = 91.5 bits (217), Expect = 1e-17
Identities = 49/84 (58%), Positives = 59/84 (70%)
Frame = +3
Query: 255 GTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 434
GTVT+DVRL +PK+ V TE AR RILAAGG+ LTFDQLA + PTG T+L++G R
Sbjct: 380 GTVTDDVRLLTVPKIKV----FTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLRGPR 435
Query: 435 NAR*AVRHFGPAPGAPRSHTKPYV 506
R ++HFG A G P SH KPYV
Sbjct: 436 -VREELKHFGRAAGLPGSHAKPYV 458
Score = 37.9 bits (84), Expect = 0.18
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +1
Query: 121 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVG 258
T++ FN VLRRL +R R PISVSRL + + + VVVG
Sbjct: 335 TDSNFNATVLRRLQQTRTARYPISVSRLVKQINTAKDKTRTLVVVG 380
>UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L18;
n=1; Theileria annulata strain Ankara|Rep: 60S ribosomal
subunit protein L18 - Theileria annulata strain Ankara
Length = 222
Score = 85.0 bits (201), Expect = 1e-15
Identities = 43/86 (50%), Positives = 58/86 (67%)
Frame = +3
Query: 267 NDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAR* 446
+D R+ +PK++V AL VTE AR RILA+GGE+LTFDQL R+P G K L++G+ AR
Sbjct: 125 DDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPIGGKCTLLRGETKARE 184
Query: 447 AVRHFGPAPGAPRSHTKPYVRPRDMK 524
AV+HF + + KPYVR + K
Sbjct: 185 AVKHF---RNEVKGNPKPYVRSKGRK 207
Score = 41.9 bits (94), Expect = 0.011
Identities = 21/46 (45%), Positives = 33/46 (71%)
Frame = +1
Query: 121 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVG 258
T+ FN+IVL+RL M R + P+S+S+L++HM+ +R AVV+G
Sbjct: 40 TDFPFNKIVLKRLLMPRRYKAPLSLSKLSKHME--SRPNNTAVVIG 83
>UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L18 - Giardia
lamblia ATCC 50803
Length = 179
Score = 84.6 bits (200), Expect = 2e-15
Identities = 41/83 (49%), Positives = 54/83 (65%)
Frame = +3
Query: 252 SGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQ 431
+ TVTND RL IP+MT+ AL + AR+RI AGG ++FD+L PTG VL+QG+
Sbjct: 82 ASTVTNDERLVTIPRMTICALKFSATARSRIEKAGGRCMSFDELLAEKPTGDNCVLLQGR 141
Query: 432 RNAR*AVRHFGPAPGAPRSHTKP 500
R+ R + FG +PG P SH KP
Sbjct: 142 RSCRAVCKKFG-SPGRPNSHVKP 163
Score = 46.8 bits (106), Expect = 4e-04
Identities = 33/83 (39%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +1
Query: 7 MGIDINHK-HDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRP 183
MGID+ RKV R E KS + T F +++ +RL +S+ NRP
Sbjct: 1 MGIDLKTGIKKRKVERKEPKSPNPYIRLLHNAFKVVYENTGEDFTKVLTKRLCLSKTNRP 60
Query: 184 PISVSRLARHMKKPTREGLIAVV 252
+SVSRLA M K RE IAVV
Sbjct: 61 VLSVSRLAHLMHK--REDKIAVV 81
>UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L18 - Entamoeba histolytica HM-1:IMSS
Length = 168
Score = 84.2 bits (199), Expect = 2e-15
Identities = 41/69 (59%), Positives = 52/69 (75%)
Frame = +3
Query: 258 TVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRN 437
TVT D R Y +PKM V AL T+ A A I AGG+ L FD+LAL+APTG+KTVL++G+RN
Sbjct: 83 TVTYDSR-YPVPKMNVCALKFTKTAEAAITKAGGKCLRFDELALKAPTGRKTVLIRGKRN 141
Query: 438 AR*AVRHFG 464
R A++HFG
Sbjct: 142 VREALKHFG 150
Score = 46.0 bits (104), Expect = 7e-04
Identities = 26/81 (32%), Positives = 38/81 (46%)
Frame = +1
Query: 7 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 186
M ID++ H RK + + T +KF + +L RL +SR+NRP
Sbjct: 1 MAIDLDRHHVRKHVSKTARGNNAYMKLLVRLYGFLARRTQSKFAKTILHRLCLSRVNRPI 60
Query: 187 ISVSRLARHMKKPTREGLIAV 249
+S S+LA MKK E + V
Sbjct: 61 VSTSKLACLMKKHPEETAVCV 81
>UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal
protein L18, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ribosomal protein
L18, partial - Strongylocentrotus purpuratus
Length = 354
Score = 83.8 bits (198), Expect = 3e-15
Identities = 36/58 (62%), Positives = 50/58 (86%)
Frame = +3
Query: 255 GTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQG 428
G +T+DVR++K+PK+ + AL VT +ARARI+ AGGEI+TFDQLAL++P G+ TVL+QG
Sbjct: 54 GCITDDVRIHKLPKLKICALRVTARARARIIKAGGEIITFDQLALQSPKGQNTVLMQG 111
Score = 59.7 bits (138), Expect = 5e-08
Identities = 29/46 (63%), Positives = 35/46 (76%)
Frame = +1
Query: 121 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVG 258
TNAKFN IVL+RLFMSR N+ +S++R+ R M K REG AVVVG
Sbjct: 9 TNAKFNNIVLKRLFMSRSNKAAMSLARVVRFMNKDGREGKTAVVVG 54
>UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L18 - Monodelphis domestica
Length = 184
Score = 77.4 bits (182), Expect = 2e-13
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = +3
Query: 255 GTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 434
GTVT+++R+ +PK+ V+AL VT AR+RIL A G+IL+FDQLA+ +P G + QG
Sbjct: 72 GTVTDNIRIQDVPKLKVSALRVTSNARSRILKANGKILSFDQLAMTSPKGPQK-CYQG-- 128
Query: 435 NAR*AVRHFGPAPGAPRSHTKPYV 506
RH G G+P S+ KPYV
Sbjct: 129 -----YRHLGKVSGSPHSYAKPYV 147
>UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein L18 -
Ornithorhynchus anatinus
Length = 188
Score = 74.5 bits (175), Expect = 2e-12
Identities = 34/66 (51%), Positives = 44/66 (66%)
Frame = +1
Query: 7 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 186
+G+DI H DRKVRR E KSQDI TN+ FN++VL+RLFMSR NRPP
Sbjct: 110 LGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNKVVLKRLFMSRTNRPP 169
Query: 187 ISVSRL 204
+++SR+
Sbjct: 170 LALSRM 175
>UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 421
Score = 51.2 bits (117), Expect = 2e-05
Identities = 29/84 (34%), Positives = 46/84 (54%)
Frame = +1
Query: 7 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 186
+G+ ++ K +K + T KS DI T +KFN + L+R FMS++N+ P
Sbjct: 3 IGLVVDDK-SKKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLP 61
Query: 187 ISVSRLARHMKKPTREGLIAVVVG 258
+ +SRL R M ++G I VV+G
Sbjct: 62 LLLSRLVRFM--DGKKGKIVVVIG 83
>UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 271
Score = 51.2 bits (117), Expect = 2e-05
Identities = 29/84 (34%), Positives = 46/84 (54%)
Frame = +1
Query: 7 MGIDINHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPP 186
+G+ ++ K +K + T KS DI T +KFN + L+R FMS++N+ P
Sbjct: 3 IGLVVDDK-SKKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLP 61
Query: 187 ISVSRLARHMKKPTREGLIAVVVG 258
+ +SRL R M ++G I VV+G
Sbjct: 62 LLLSRLVRFM--DGKKGKIVVVIG 83
>UniRef50_Q8SS76 Cluster: 60S RIBOSOMAL PROTEIN L18; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L18
- Encephalitozoon cuniculi
Length = 200
Score = 43.2 bits (97), Expect = 0.005
Identities = 27/80 (33%), Positives = 39/80 (48%)
Frame = +3
Query: 261 VTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNA 440
V +D + IP + V AL ++ + +I GG I T DQL P LV + +
Sbjct: 89 VLDDDEVMVIPAVKVVALQWSKGVKEKIERYGGTIGTLDQLFELCPNMDDICLVSTNKFS 148
Query: 441 R*AVRHFGPAPGAPRSHTKP 500
R + + +GPAPG S T P
Sbjct: 149 RRSAKFWGPAPGEKGSTTYP 168
>UniRef50_Q580C7 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 350
Score = 39.9 bits (89), Expect = 0.045
Identities = 21/80 (26%), Positives = 40/80 (50%)
Frame = +3
Query: 111 GQTYKCQIQSDRSTPALYEPYQPATNLCVSFGAPHEEANS*GIDCRGSGTVTNDVRLYKI 290
G ++CQ++ R +P++ +T+ CVS + S G+ ++T + +
Sbjct: 223 GMLHRCQVKRTRVSPSVLHKSPTSTSGCVSSSIQMDSTGSCGVSVGREQSITTQLLPSDV 282
Query: 291 PKMTVAALHVTEKARARILA 350
++ VAA + E+ RAR LA
Sbjct: 283 WEVCVAAKNAEEEVRARALA 302
>UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7;
Thermoprotei|Rep: 50S ribosomal protein L18e -
Pyrobaculum aerophilum
Length = 122
Score = 37.1 bits (82), Expect = 0.32
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +3
Query: 294 KMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLV 422
K+ VAA+ ++ KA +++ AGGE+LT +L + P G +V
Sbjct: 79 KIIVAAVKISPKAARKVIEAGGEVLTIPELVRKYPRGSGVRIV 121
>UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillardia
theta|Rep: 60s ribosomal protein L18 - Guillardia theta
(Cryptomonas phi)
Length = 167
Score = 36.3 bits (80), Expect = 0.55
Identities = 14/58 (24%), Positives = 33/58 (56%)
Frame = +3
Query: 261 VTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 434
+ ND R+ K PK+ + AL+ + + +I+ GG+I +++ + K + ++G++
Sbjct: 109 ILNDERISKTPKLKIFALNFSSSVKKKIIENGGQIFKLNEIKVDDFLNMKILFIRGKK 166
>UniRef50_UPI0000E4A0C9 Cluster: PREDICTED: similar to tethering
factor SEC34; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to tethering factor SEC34 -
Strongylocentrotus purpuratus
Length = 781
Score = 33.5 bits (73), Expect = 3.9
Identities = 17/63 (26%), Positives = 37/63 (58%)
Frame = -2
Query: 467 RAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSSHRHLRY 288
+A+ CL+ +LTL + + + +Q + K+ +S+S+NA T F+G +S+ ++
Sbjct: 198 QARFKQCLSK-ALTLIKAAVFTILNGATQQVVPKDVTSTSENAFTLFYGKFRSNAPKIKA 256
Query: 287 LVQ 279
L++
Sbjct: 257 LME 259
>UniRef50_UPI0000E21303 Cluster: PREDICTED: similar to MGC11257
protein; n=1; Pan troglodytes|Rep: PREDICTED: similar to
MGC11257 protein - Pan troglodytes
Length = 409
Score = 33.5 bits (73), Expect = 3.9
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = -1
Query: 480 VLLEQGQSDALPNEHFADLVPVLSSCQSEHEEPADQK*EFLLQQ 349
+LL SD +P+EHF+ L+ L Q E QK E L+Q+
Sbjct: 342 LLLHMYDSDKVPDEHFSTLLAYLEGLQGRARELTVQKAEALMQE 385
>UniRef50_UPI0000D56F37 Cluster: PREDICTED: similar to CG4917-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG4917-PA, isoform A - Tribolium castaneum
Length = 838
Score = 33.1 bits (72), Expect = 5.1
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 364 FLLLISWLFVLRLARRQYWYKVSEMLVRQCVTLALLQ 474
FL + L ++++A RQ W +ML+ CVTL+ LQ
Sbjct: 455 FLYMFIPLLLVKIASRQDWKGTYQMLIPHCVTLSWLQ 491
>UniRef50_Q4RHJ6 Cluster: Chromosome 19 SCAF15045, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 19
SCAF15045, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 598
Score = 32.7 bits (71), Expect = 6.8
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -2
Query: 473 WSRAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQ 345
W K T +I+LT Q+CLL R+T + NF+ SS+
Sbjct: 73 WKYFKYTMAPYTIALTPEQHCLLGLRNTGEHFCSTSNFARSSK 115
>UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2;
Thermoprotei|Rep: Ribosomal protein L18E - Cenarchaeum
symbiosum
Length = 126
Score = 32.7 bits (71), Expect = 6.8
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +3
Query: 294 KMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLV 422
K+T+ ++ A ++L++GG + F +L PTGK VL+
Sbjct: 83 KITLCPFGISGAAAEKVLSSGGRVTGFAELTKEFPTGKGVVLL 125
>UniRef50_Q1N519 Cluster: Pentapeptide repeat family protein; n=1;
Oceanobacter sp. RED65|Rep: Pentapeptide repeat family
protein - Oceanobacter sp. RED65
Length = 915
Score = 32.3 bits (70), Expect = 9.0
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = -2
Query: 509 SNIGFSVRARCSWSRAKVTHC---LTSISLTLYQYCLLASRSTKSQLIKSKNFSSS 351
SN+ ++ RC +S AK+ C +I +++ YC L + +K I +FS+S
Sbjct: 637 SNLQGAIAVRCDFSHAKLIDCNLDQANIGGSMFAYCELRTNHSKEIEIAKSDFSNS 692
>UniRef50_Q0SUG4 Cluster: CRISPR-associated protein Csx8, putative;
n=1; Clostridium perfringens SM101|Rep:
CRISPR-associated protein Csx8, putative - Clostridium
perfringens (strain SM101 / Type A)
Length = 447
Score = 32.3 bits (70), Expect = 9.0
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -2
Query: 383 QLIKSKNFSSSSQNACTSFFGNMKSSHRHLRYLVQ 279
+L KS +F +S+N T+ FGNMK S ++ + V+
Sbjct: 220 ELKKSNSFIENSENTRTTLFGNMKESAEYIGFDVE 254
>UniRef50_A7NYY2 Cluster: Chromosome chr6 scaffold_3, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr6 scaffold_3, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 638
Score = 32.3 bits (70), Expect = 9.0
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +3
Query: 168 PYQPATNLCVSFGAPHEEANS*GIDCRGSGTVTNDVRLYKIPKMTVAALHV 320
P P TNLC + H+ A S D +VT+ L +P M++ AL V
Sbjct: 471 PDPPVTNLCDFVESDHDSAPSPDTDMSIDKSVTDSKALVSVPAMSMEALAV 521
>UniRef50_Q4UCQ7 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 1007
Score = 32.3 bits (70), Expect = 9.0
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = -2
Query: 455 THCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSSHRHLRYL 285
+HC + I LT Q CL S S L +F +SS F N + +R+ YL
Sbjct: 598 SHCCSKIPLTTLQECLEKSSSYGEALTDLNSFPNSSTIHLAFIFKNFLNVNRYKYYL 654
>UniRef50_Q6CXL9 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 186
Score = 32.3 bits (70), Expect = 9.0
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = -1
Query: 231 TSWLLHVARQTRHRDWWPVDTAHKEPA*NDLIEFGICTS 115
+++LL +R + +R+WW VD ++ ++L+E+ I T+
Sbjct: 132 STFLLQGSRDSGNRNWWSVDLGQEQRLQDNLVEWSISTT 170
>UniRef50_A1DA31 Cluster: Putative uncharacterized protein; n=1;
Neosartorya fischeri NRRL 181|Rep: Putative
uncharacterized protein - Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 306
Score = 32.3 bits (70), Expect = 9.0
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 207 RQTRHRDWWPVDTAHKEP 154
RQ+ DWWP D HKEP
Sbjct: 179 RQSTKPDWWPSDVPHKEP 196
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,767,633
Number of Sequences: 1657284
Number of extensions: 13207508
Number of successful extensions: 35737
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 34445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35695
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42317807226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -