Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1091
         (723 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    26   1.4  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     24   5.5  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   7.2  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    23   9.6  

>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
 Frame = -3

Query: 247 IKLNLNINKVLQLTQKKEILCTNVF--HNKK*HYF 149
           +KL L +++++ L  K +IL TN++  H  + H F
Sbjct: 63  VKLGLRLSQLIDLNLKDQILTTNIWLEHEWQDHKF 97


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -2

Query: 413 LSSTDFSNLNKSQLKQINWSRVAKRSASSQSFAIILLQA 297
           LS+TD + L ++   Q +     + SAS+Q  AI  L A
Sbjct: 610 LSTTDLNRLEQTANMQTSGGNYQQHSASNQQQAIKALLA 648


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -2

Query: 398 FSNLNKSQLKQINWSRVAKRSASSQSF 318
           F+N N   +K INW  +     +S  +
Sbjct: 120 FNNYNLCHMKSINWEEILLAPQTSMQY 146


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
 Frame = -3

Query: 643 IFAYIIMKFVPTSIMLITHLI*CNTHYHMLPPHSLYHFTEN----LVIVFV 503
           +FA  ++  V   ++L+ ++  C   Y   PP  L+  ++     LV+VFV
Sbjct: 477 LFAPPLLLLVALKLLLVFYVNKCELMYLCQPPARLWRSSQTQTLFLVLVFV 527


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 628,205
Number of Sequences: 2352
Number of extensions: 11699
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)