BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1089
(757 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006524-1|AAH06524.1| 630|Homo sapiens eukaryotic translation ... 30 7.8
AK075192-1|BAC11461.1| 630|Homo sapiens protein ( Homo sapiens ... 30 7.8
AF255050-1|AAF70289.1| 629|Homo sapiens heme-regulated eukaryot... 30 7.8
AF183414-1|AAG09683.1| 630|Homo sapiens hemin-sensitive initiat... 30 7.8
AF181071-1|AAF18391.1| 630|Homo sapiens heme-regulated initiati... 30 7.8
AF147094-1|AAF66736.1| 629|Homo sapiens heme-regulated initiati... 30 7.8
AF100784-1|AAP97223.1| 630|Homo sapiens hemin-sensitive initita... 30 7.8
AC004895-3|AAS00356.1| 243|Homo sapiens unknown protein. 30 7.8
AB037790-1|BAA92607.1| 653|Homo sapiens KIAA1369 protein protein. 30 7.8
>BC006524-1|AAH06524.1| 630|Homo sapiens eukaryotic translation
initiation factor 2-alpha kinase 1 protein.
Length = 630
Score = 30.3 bits (65), Expect = 7.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 100 LHHNRSVKHRMRFKKIRNMHGPC 32
LHHNR++ H MR K R PC
Sbjct: 118 LHHNRAITHLMRSAKERVRQDPC 140
>AK075192-1|BAC11461.1| 630|Homo sapiens protein ( Homo sapiens
cDNA FLJ90711 fis, clone PLACE1008282, highly similar to
HEME-REGULATED EUKARYOTIC INITIATION FACTOR EIF-2-ALPHA
KINASE ).
Length = 630
Score = 30.3 bits (65), Expect = 7.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 100 LHHNRSVKHRMRFKKIRNMHGPC 32
LHHNR++ H MR K R PC
Sbjct: 118 LHHNRAITHLMRSAKERVRQDPC 140
>AF255050-1|AAF70289.1| 629|Homo sapiens heme-regulated eukaryotic
initiation factor 2 alpha kinase protein.
Length = 629
Score = 30.3 bits (65), Expect = 7.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 100 LHHNRSVKHRMRFKKIRNMHGPC 32
LHHNR++ H MR K R PC
Sbjct: 117 LHHNRAITHLMRSAKERVRRDPC 139
>AF183414-1|AAG09683.1| 630|Homo sapiens hemin-sensitive initiation
factor 2a kinase protein.
Length = 630
Score = 30.3 bits (65), Expect = 7.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 100 LHHNRSVKHRMRFKKIRNMHGPC 32
LHHNR++ H MR K R PC
Sbjct: 118 LHHNRAITHLMRSAKERVRQDPC 140
>AF181071-1|AAF18391.1| 630|Homo sapiens heme-regulated initiation
factor 2-alpha kinase protein.
Length = 630
Score = 30.3 bits (65), Expect = 7.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 100 LHHNRSVKHRMRFKKIRNMHGPC 32
LHHNR++ H MR K R PC
Sbjct: 118 LHHNRAITHLMRSAKERVRQDPC 140
>AF147094-1|AAF66736.1| 629|Homo sapiens heme-regulated initiation
factor 2 alpha kinase protein.
Length = 629
Score = 30.3 bits (65), Expect = 7.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 100 LHHNRSVKHRMRFKKIRNMHGPC 32
LHHNR++ H MR K R PC
Sbjct: 118 LHHNRAITHLMRSAKERVRQDPC 140
>AF100784-1|AAP97223.1| 630|Homo sapiens hemin-sensitive
inititation factor 2a kinase protein.
Length = 630
Score = 30.3 bits (65), Expect = 7.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 100 LHHNRSVKHRMRFKKIRNMHGPC 32
LHHNR++ H MR K R PC
Sbjct: 118 LHHNRAITHLMRSAKERVRQDPC 140
>AC004895-3|AAS00356.1| 243|Homo sapiens unknown protein.
Length = 243
Score = 30.3 bits (65), Expect = 7.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 100 LHHNRSVKHRMRFKKIRNMHGPC 32
LHHNR++ H MR K R PC
Sbjct: 118 LHHNRAITHLMRSAKERVRQDPC 140
>AB037790-1|BAA92607.1| 653|Homo sapiens KIAA1369 protein protein.
Length = 653
Score = 30.3 bits (65), Expect = 7.8
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1
Query: 100 LHHNRSVKHRMRFKKIRNMHGPC 32
LHHNR++ H MR K R PC
Sbjct: 141 LHHNRAITHLMRSAKERVRQDPC 163
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,059,804
Number of Sequences: 237096
Number of extensions: 1539991
Number of successful extensions: 3136
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3136
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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