Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1088
(415 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U20543-1|AAA63151.1| 115|Drosophila melanogaster minute(1)1B pr... 107 6e-24
BT029917-1|ABM92791.1| 115|Drosophila melanogaster GH03995p pro... 107 6e-24
AY070831-1|AAL48453.1| 115|Drosophila melanogaster AT29875p pro... 107 6e-24
AL031581-5|CAA20892.1| 115|Drosophila melanogaster EG:115C2.7,F... 107 6e-24
AE014298-77|AAN09021.1| 115|Drosophila melanogaster CG7622-PD, ... 107 6e-24
AE014298-76|AAN09020.1| 115|Drosophila melanogaster CG7622-PC, ... 107 6e-24
AE014298-75|AAF45531.1| 115|Drosophila melanogaster CG7622-PB, ... 107 6e-24
AE014298-74|AAN09019.1| 115|Drosophila melanogaster CG7622-PA, ... 107 6e-24
AE014296-3154|AAN11648.1| 154|Drosophila melanogaster CG32213-P... 28 4.3
AE014296-3151|AAN11647.1| 154|Drosophila melanogaster CG32208-P... 28 4.3
BT024251-1|ABC86313.1| 31|Drosophila melanogaster IP15867p pro... 27 7.4
BT001654-1|AAN71409.1| 388|Drosophila melanogaster RE44531p pro... 27 9.8
AY119602-1|AAM50256.1| 176|Drosophila melanogaster LD22339p pro... 27 9.8
AY051494-1|AAK92918.1| 818|Drosophila melanogaster GH14774p pro... 27 9.8
AF313621-1|AAL78208.1| 818|Drosophila melanogaster CTCF protein. 27 9.8
AE014296-1240|AAF50573.2| 818|Drosophila melanogaster CG8591-PA... 27 9.8
AE014134-1121|AAN10589.1| 388|Drosophila melanogaster CG11050-P... 27 9.8
AE014134-1120|AAN10588.1| 388|Drosophila melanogaster CG11050-P... 27 9.8
AE014134-1119|AAF52408.1| 388|Drosophila melanogaster CG11050-P... 27 9.8
>U20543-1|AAA63151.1| 115|Drosophila melanogaster minute(1)1B
protein protein.
Length = 115
Score = 107 bits (257), Expect = 6e-24
Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
Frame = +2
Query: 14 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 190
MA R+E+A+GL KGHKT+KI K DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1 MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59
Query: 191 HAQYEKRAMELLKVSKDKRAL 253
HA YEKR MELLKVSKDKRAL
Sbjct: 60 HAPYEKRTMELLKVSKDKRAL 80
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = +1
Query: 235 KRQACSEFLKRRLGTHIRAKRKREELSNVLAQMRK 339
K + +FLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 75 KDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109
>BT029917-1|ABM92791.1| 115|Drosophila melanogaster GH03995p
protein.
Length = 115
Score = 107 bits (257), Expect = 6e-24
Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
Frame = +2
Query: 14 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 190
MA R+E+A+GL KGHKT+KI K DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1 MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59
Query: 191 HAQYEKRAMELLKVSKDKRAL 253
HA YEKR MELLKVSKDKRAL
Sbjct: 60 HAPYEKRTMELLKVSKDKRAL 80
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = +1
Query: 235 KRQACSEFLKRRLGTHIRAKRKREELSNVLAQMRK 339
K + +FLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 75 KDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109
>AY070831-1|AAL48453.1| 115|Drosophila melanogaster AT29875p
protein.
Length = 115
Score = 107 bits (257), Expect = 6e-24
Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
Frame = +2
Query: 14 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 190
MA R+E+A+GL KGHKT+KI K DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1 MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59
Query: 191 HAQYEKRAMELLKVSKDKRAL 253
HA YEKR MELLKVSKDKRAL
Sbjct: 60 HAPYEKRTMELLKVSKDKRAL 80
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = +1
Query: 235 KRQACSEFLKRRLGTHIRAKRKREELSNVLAQMRK 339
K + +FLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 75 KDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109
>AL031581-5|CAA20892.1| 115|Drosophila melanogaster
EG:115C2.7,FBgn0002579;RpL36 protein.
Length = 115
Score = 107 bits (257), Expect = 6e-24
Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
Frame = +2
Query: 14 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 190
MA R+E+A+GL KGHKT+KI K DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1 MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59
Query: 191 HAQYEKRAMELLKVSKDKRAL 253
HA YEKR MELLKVSKDKRAL
Sbjct: 60 HAPYEKRTMELLKVSKDKRAL 80
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = +1
Query: 235 KRQACSEFLKRRLGTHIRAKRKREELSNVLAQMRK 339
K + +FLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 75 KDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109
>AE014298-77|AAN09021.1| 115|Drosophila melanogaster CG7622-PD,
isoform D protein.
Length = 115
Score = 107 bits (257), Expect = 6e-24
Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
Frame = +2
Query: 14 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 190
MA R+E+A+GL KGHKT+KI K DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1 MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59
Query: 191 HAQYEKRAMELLKVSKDKRAL 253
HA YEKR MELLKVSKDKRAL
Sbjct: 60 HAPYEKRTMELLKVSKDKRAL 80
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = +1
Query: 235 KRQACSEFLKRRLGTHIRAKRKREELSNVLAQMRK 339
K + +FLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 75 KDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109
>AE014298-76|AAN09020.1| 115|Drosophila melanogaster CG7622-PC,
isoform C protein.
Length = 115
Score = 107 bits (257), Expect = 6e-24
Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
Frame = +2
Query: 14 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 190
MA R+E+A+GL KGHKT+KI K DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1 MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59
Query: 191 HAQYEKRAMELLKVSKDKRAL 253
HA YEKR MELLKVSKDKRAL
Sbjct: 60 HAPYEKRTMELLKVSKDKRAL 80
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = +1
Query: 235 KRQACSEFLKRRLGTHIRAKRKREELSNVLAQMRK 339
K + +FLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 75 KDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109
>AE014298-75|AAF45531.1| 115|Drosophila melanogaster CG7622-PB,
isoform B protein.
Length = 115
Score = 107 bits (257), Expect = 6e-24
Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
Frame = +2
Query: 14 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 190
MA R+E+A+GL KGHKT+KI K DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1 MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59
Query: 191 HAQYEKRAMELLKVSKDKRAL 253
HA YEKR MELLKVSKDKRAL
Sbjct: 60 HAPYEKRTMELLKVSKDKRAL 80
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = +1
Query: 235 KRQACSEFLKRRLGTHIRAKRKREELSNVLAQMRK 339
K + +FLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 75 KDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109
>AE014298-74|AAN09019.1| 115|Drosophila melanogaster CG7622-PA,
isoform A protein.
Length = 115
Score = 107 bits (257), Expect = 6e-24
Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
Frame = +2
Query: 14 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVG 190
MA R+E+A+GL KGHKT+KI K DK ++ +R +RLK +QT+H+KF+RDLVREVVG
Sbjct: 1 MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59
Query: 191 HAQYEKRAMELLKVSKDKRAL 253
HA YEKR MELLKVSKDKRAL
Sbjct: 60 HAPYEKRTMELLKVSKDKRAL 80
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/35 (74%), Positives = 30/35 (85%)
Frame = +1
Query: 235 KRQACSEFLKRRLGTHIRAKRKREELSNVLAQMRK 339
K + +FLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 75 KDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109
>AE014296-3154|AAN11648.1| 154|Drosophila melanogaster CG32213-PA
protein.
Length = 154
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -2
Query: 318 VAKFFTLPLGADVCAQSSLQELRARLSFDTLSNSIALFSY*ACP 187
VAK+ PL A V A+ + L ARL++ + A SY A P
Sbjct: 106 VAKYAATPLAAPVVAKYAATPLAARLAYSSPLAYSAPLSYAAAP 149
>AE014296-3151|AAN11647.1| 154|Drosophila melanogaster CG32208-PA
protein.
Length = 154
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -2
Query: 318 VAKFFTLPLGADVCAQSSLQELRARLSFDTLSNSIALFSY*ACP 187
VAK+ PL A V A+ + L ARL++ + A SY A P
Sbjct: 106 VAKYAATPLAAPVVAKYAATPLAARLAYSSPLAYSAPLSYAAAP 149
>BT024251-1|ABC86313.1| 31|Drosophila melanogaster IP15867p
protein.
Length = 31
Score = 27.5 bits (58), Expect = 7.4
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 414 FFFFFLNVN*CIYHLMVMVMSL 349
FFFFFL VN C+Y +++ L
Sbjct: 6 FFFFFLFVNKCLYIYLLLANKL 27
>BT001654-1|AAN71409.1| 388|Drosophila melanogaster RE44531p
protein.
Length = 388
Score = 27.1 bits (57), Expect = 9.8
Identities = 18/32 (56%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +2
Query: 140 QTKHSKFVRDLVR-EVVGHA-QYEKRAMELLK 229
QT SKFV+DL R ++V A +YEKR LLK
Sbjct: 295 QTAESKFVKDLDRLDMVMQAFEYEKRDNCLLK 326
>AY119602-1|AAM50256.1| 176|Drosophila melanogaster LD22339p
protein.
Length = 176
Score = 27.1 bits (57), Expect = 9.8
Identities = 18/32 (56%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +2
Query: 140 QTKHSKFVRDLVR-EVVGHA-QYEKRAMELLK 229
QT SKFV+DL R ++V A +YEKR LLK
Sbjct: 83 QTAESKFVKDLDRLDMVMQAFEYEKRDNCLLK 114
>AY051494-1|AAK92918.1| 818|Drosophila melanogaster GH14774p
protein.
Length = 818
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 35 AVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHS 154
++ LR T K + + KAI +RPAR + K S
Sbjct: 131 SINLRPAKSTPKATTSKPPPEPKAISVRPARAAAAKAKQS 170
>AF313621-1|AAL78208.1| 818|Drosophila melanogaster CTCF protein.
Length = 818
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 35 AVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHS 154
++ LR T K + + KAI +RPAR + K S
Sbjct: 131 SINLRPAKSTPKATTSKPPPEPKAISVRPARAAAAKAKQS 170
>AE014296-1240|AAF50573.2| 818|Drosophila melanogaster CG8591-PA
protein.
Length = 818
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 35 AVGLRKGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHS 154
++ LR T K + + KAI +RPAR + K S
Sbjct: 131 SINLRPAKSTPKATTSKPPPEPKAISVRPARAAAAKAKQS 170
>AE014134-1121|AAN10589.1| 388|Drosophila melanogaster CG11050-PC,
isoform C protein.
Length = 388
Score = 27.1 bits (57), Expect = 9.8
Identities = 18/32 (56%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +2
Query: 140 QTKHSKFVRDLVR-EVVGHA-QYEKRAMELLK 229
QT SKFV+DL R ++V A +YEKR LLK
Sbjct: 295 QTAESKFVKDLDRLDMVMQAFEYEKRDNCLLK 326
>AE014134-1120|AAN10588.1| 388|Drosophila melanogaster CG11050-PB,
isoform B protein.
Length = 388
Score = 27.1 bits (57), Expect = 9.8
Identities = 18/32 (56%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +2
Query: 140 QTKHSKFVRDLVR-EVVGHA-QYEKRAMELLK 229
QT SKFV+DL R ++V A +YEKR LLK
Sbjct: 295 QTAESKFVKDLDRLDMVMQAFEYEKRDNCLLK 326
>AE014134-1119|AAF52408.1| 388|Drosophila melanogaster CG11050-PA,
isoform A protein.
Length = 388
Score = 27.1 bits (57), Expect = 9.8
Identities = 18/32 (56%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +2
Query: 140 QTKHSKFVRDLVR-EVVGHA-QYEKRAMELLK 229
QT SKFV+DL R ++V A +YEKR LLK
Sbjct: 295 QTAESKFVKDLDRLDMVMQAFEYEKRDNCLLK 326
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,405,696
Number of Sequences: 53049
Number of extensions: 298336
Number of successful extensions: 780
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1230182214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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