Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1087
         (779 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    27   0.17 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.8  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   4.8  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   6.3  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +2

Query: 437 LVRPDKLHSQYSSPRYSARRHVIASENT-VLEGSFQSRMVLSTKDTW 574
           L + D +    S  RY  +  V AS+N   L      R+++STKD W
Sbjct: 441 LTQADVIEKYLSKARYVIQTWVPASDNLPTLLLELGYRIIVSTKDAW 487


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -3

Query: 588 SKVCYQVSFVLRTIRLWNE 532
           SK+CY    + ++++L+NE
Sbjct: 224 SKICYLHQHLSKSVKLFNE 242


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -3

Query: 588 SKVCYQVSFVLRTIRLWNE 532
           SK+CY    + ++++L+NE
Sbjct: 242 SKICYLHQHLSKSVKLFNE 260


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 624 IFHLYYLEPLCSSKVCYQVSFVLR 553
           IF LYYL  +C +     +  +LR
Sbjct: 262 IFELYYLSHVCQNVSTEVIGNILR 285


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,184
Number of Sequences: 336
Number of extensions: 3442
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)