Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1087
(779 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 27 0.26
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 27 0.26
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 27 0.26
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 27 0.26
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 27 0.26
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 27 0.26
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 27 0.26
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 27 0.26
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 27 0.26
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 27 0.26
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 27 0.26
EF051030-1|ABN05618.1| 118|Apis mellifera phosphoenolpyruvate c... 25 1.0
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 23 4.2
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 23 4.2
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 22 5.6
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 5.6
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 22 5.6
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 7.4
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 9.7
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.6 bits (56), Expect = 0.26
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 668 NNYSEHPSNRLYLHIIYI 721
NNY++H N+LY +I YI
Sbjct: 99 NNYNKHNYNKLYYNINYI 116
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.6 bits (56), Expect = 0.26
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 668 NNYSEHPSNRLYLHIIYI 721
NNY++H N+LY +I YI
Sbjct: 99 NNYNKHNYNKLYYNINYI 116
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.6 bits (56), Expect = 0.26
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 668 NNYSEHPSNRLYLHIIYI 721
NNY++H N+LY +I YI
Sbjct: 99 NNYNKHNYNKLYYNINYI 116
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.6 bits (56), Expect = 0.26
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 668 NNYSEHPSNRLYLHIIYI 721
NNY++H N+LY +I YI
Sbjct: 99 NNYNKHNYNKLYYNINYI 116
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.6 bits (56), Expect = 0.26
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 668 NNYSEHPSNRLYLHIIYI 721
NNY++H N+LY +I YI
Sbjct: 99 NNYNKHNYNKLYYNINYI 116
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.6 bits (56), Expect = 0.26
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 668 NNYSEHPSNRLYLHIIYI 721
NNY++H N+LY +I YI
Sbjct: 99 NNYNKHNYNKLYYNINYI 116
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.6 bits (56), Expect = 0.26
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 668 NNYSEHPSNRLYLHIIYI 721
NNY++H N+LY +I YI
Sbjct: 99 NNYNKHNYNKLYYNINYI 116
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.6 bits (56), Expect = 0.26
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 668 NNYSEHPSNRLYLHIIYI 721
NNY++H N+LY +I YI
Sbjct: 99 NNYNKHNYNKLYYNINYI 116
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 26.6 bits (56), Expect = 0.26
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 668 NNYSEHPSNRLYLHIIYI 721
NNY++H N+LY +I YI
Sbjct: 99 NNYNKHNYNKLYYNINYI 116
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 26.6 bits (56), Expect = 0.26
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 668 NNYSEHPSNRLYLHIIYI 721
NNY++H N+LY +I YI
Sbjct: 332 NNYNKHNYNKLYYNINYI 349
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 26.6 bits (56), Expect = 0.26
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +2
Query: 668 NNYSEHPSNRLYLHIIYI 721
NNY++H N+LY +I YI
Sbjct: 332 NNYNKHNYNKLYYNINYI 349
>EF051030-1|ABN05618.1| 118|Apis mellifera phosphoenolpyruvate
carboxykinase protein.
Length = 118
Score = 24.6 bits (51), Expect = 1.0
Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -2
Query: 574 PGIFCAKNHSALE*AFQNSVFRRY-NMSTSAITWTGV 467
PG A N +A++ F+N++F + S I W G+
Sbjct: 71 PGTSSATNPNAMKTIFKNTIFTNVASTSDGGIFWEGL 107
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 22.6 bits (46), Expect = 4.2
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -2
Query: 526 QNSVFRRYNMSTSAITWTGVLRVEL 452
+NS FRR A+ + V+R++L
Sbjct: 201 ENSEFRRMGREVFAVNFMNVMRMKL 225
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 22.6 bits (46), Expect = 4.2
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2
Query: 668 NNYSEHPSNRLYLHIIYI 721
NNY+ + + +LY +I YI
Sbjct: 316 NNYNNYNNKKLYYNINYI 333
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 22.2 bits (45), Expect = 5.6
Identities = 5/18 (27%), Positives = 12/18 (66%)
Frame = -2
Query: 217 FYCLNYIFLVFFFTFIPK 164
F C++ ++++ FIP+
Sbjct: 402 FLCISLVYIIMLIIFIPR 419
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.2 bits (45), Expect = 5.6
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 666 KTITQSTPLTDYIYT*YTSAVE*NKRQYLSYLP 764
+TI S T + T Y S V+ + QY YLP
Sbjct: 303 ETIISSVFTTRHNATCYLSHVDPDVVQYFGYLP 335
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 22.2 bits (45), Expect = 5.6
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 666 KTITQSTPLTDYIYT*YTSAVE*NKRQYLSYLP 764
+TI S T + T Y S V+ + QY YLP
Sbjct: 9 ETIISSVFTTRHNATCYLSHVDPDVVQYFGYLP 41
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 7.4
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 546 EWFLAQKIPGNRLWM 590
EWF IPGN W+
Sbjct: 562 EWFDYAFIPGNLKWL 576
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.4 bits (43), Expect = 9.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 56 AESTTGSETRPTEKIRR 6
A TTG+ T PT ++R+
Sbjct: 252 AAMTTGTTTIPTRRLRK 268
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,485
Number of Sequences: 438
Number of extensions: 3930
Number of successful extensions: 22
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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