Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1086
(516 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC061890-1|AAH61890.1| 110|Homo sapiens ribosomal protein L35a ... 101 2e-21
BC017093-1|AAH17093.1| 110|Homo sapiens RPL35A protein protein. 101 2e-21
BC010949-1|AAH10949.1| 110|Homo sapiens ribosomal protein L35a ... 101 2e-21
BC001037-1|AAH01037.1| 110|Homo sapiens ribosomal protein L35a ... 101 2e-21
AY871273-1|AAX11429.1| 110|Homo sapiens cell growth-inhibiting ... 101 2e-21
X52966-1|CAA37138.1| 110|Homo sapiens protein ( Human mRNA for ... 98 1e-20
AL365223-3|CAI15713.1| 96|Homo sapiens ribosomal protein L35a ... 63 6e-10
X94619-1|CAA64325.1| 21|Homo sapiens ribosomal protein L35a pr... 38 0.016
AK055778-1|BAB71011.1| 1113|Homo sapiens protein ( Homo sapiens ... 33 0.45
AF391558-1|AAO13803.1| 1192|Homo sapiens myosin IIIB variant MYO... 33 0.45
AF391557-1|AAO13802.1| 1275|Homo sapiens myosin IIIB variant MYO... 33 0.45
AF391556-1|AAO13801.1| 1314|Homo sapiens myosin IIIB variant MYO... 33 0.45
AF391555-1|AAO13800.1| 1341|Homo sapiens myosin IIIB variant MYO... 33 0.45
AF391554-1|AAO13799.1| 1251|Homo sapiens myosin IIIB variant MYO... 33 0.45
AF369908-1|AAL57233.1| 1278|Homo sapiens myosin IIIB protein. 33 0.45
AC114794-1|AAY24159.1| 249|Homo sapiens unknown protein. 33 0.45
X65964-1|CAA46780.1| 1618|Homo sapiens nestin protein. 30 5.5
DQ926304-1|ABK81522.1| 127|Homo sapiens immunoglobulin heavy ch... 29 7.3
BC125272-1|AAI25273.1| 625|Homo sapiens MYO3A protein protein. 29 7.3
BC119811-1|AAI19812.1| 664|Homo sapiens MYO3A protein protein. 29 7.3
BC045538-1|AAH45538.1| 247|Homo sapiens MYO3A protein protein. 29 7.3
BC036079-1|AAH36079.1| 247|Homo sapiens MYO3A protein protein. 29 7.3
AY101367-1|AAM34500.1| 1616|Homo sapiens myosin IIIA protein. 29 7.3
AL391812-1|CAI17380.1| 1616|Homo sapiens myosin IIIA protein. 29 7.3
AL360217-1|CAD13206.2| 1616|Homo sapiens myosin IIIA protein. 29 7.3
AL358612-3|CAH73816.1| 247|Homo sapiens myosin IIIA protein. 29 7.3
AL358612-1|CAH73814.1| 1616|Homo sapiens myosin IIIA protein. 29 7.3
AL162503-4|CAH73661.1| 1616|Homo sapiens myosin IIIA protein. 29 7.3
AF229172-1|AAF70861.1| 1615|Homo sapiens class III myosin protein. 29 7.3
AM082137-1|CAL06283.1| 101|Homo sapiens immunoglobulin heavy ch... 29 9.7
AL691429-1|CAI17262.1| 165|Homo sapiens novel protein protein. 29 9.7
>BC061890-1|AAH61890.1| 110|Homo sapiens ribosomal protein L35a
protein.
Length = 110
Score = 101 bits (241), Expect = 2e-21
Identities = 48/65 (73%), Positives = 52/65 (80%)
Frame = +2
Query: 257 YVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVML 436
YVY+AK T PGG K K R IWGKVTR HGNSG VRAKF+SNLPA+A+GHRIRVML
Sbjct: 49 YVYKAKNNTVTPGG---KPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVML 105
Query: 437 YPSRI 451
YPSRI
Sbjct: 106 YPSRI 110
Score = 69.3 bits (162), Expect = 7e-12
Identities = 29/46 (63%), Positives = 37/46 (80%)
Frame = +3
Query: 120 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCS 257
GRL++KA+F GYKRGLRNQ E+TALLK+EG R++ FY GK C+
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCA 48
>BC017093-1|AAH17093.1| 110|Homo sapiens RPL35A protein protein.
Length = 110
Score = 101 bits (241), Expect = 2e-21
Identities = 48/65 (73%), Positives = 52/65 (80%)
Frame = +2
Query: 257 YVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVML 436
YVY+AK T PGG K K R IWGKVTR HGNSG VRAKF+SNLPA+A+GHRIRVML
Sbjct: 49 YVYKAKNNTVTPGG---KPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVML 105
Query: 437 YPSRI 451
YPSRI
Sbjct: 106 YPSRI 110
Score = 69.3 bits (162), Expect = 7e-12
Identities = 29/46 (63%), Positives = 37/46 (80%)
Frame = +3
Query: 120 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCS 257
GRL++KA+F GYKRGLRNQ E+TALLK+EG R++ FY GK C+
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCA 48
>BC010949-1|AAH10949.1| 110|Homo sapiens ribosomal protein L35a
protein.
Length = 110
Score = 101 bits (241), Expect = 2e-21
Identities = 48/65 (73%), Positives = 52/65 (80%)
Frame = +2
Query: 257 YVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVML 436
YVY+AK T PGG K K R IWGKVTR HGNSG VRAKF+SNLPA+A+GHRIRVML
Sbjct: 49 YVYKAKNNTVTPGG---KPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVML 105
Query: 437 YPSRI 451
YPSRI
Sbjct: 106 YPSRI 110
Score = 69.3 bits (162), Expect = 7e-12
Identities = 29/46 (63%), Positives = 37/46 (80%)
Frame = +3
Query: 120 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCS 257
GRL++KA+F GYKRGLRNQ E+TALLK+EG R++ FY GK C+
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCA 48
>BC001037-1|AAH01037.1| 110|Homo sapiens ribosomal protein L35a
protein.
Length = 110
Score = 101 bits (241), Expect = 2e-21
Identities = 48/65 (73%), Positives = 52/65 (80%)
Frame = +2
Query: 257 YVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVML 436
YVY+AK T PGG K K R IWGKVTR HGNSG VRAKF+SNLPA+A+GHRIRVML
Sbjct: 49 YVYKAKNNTVTPGG---KPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVML 105
Query: 437 YPSRI 451
YPSRI
Sbjct: 106 YPSRI 110
Score = 69.3 bits (162), Expect = 7e-12
Identities = 29/46 (63%), Positives = 37/46 (80%)
Frame = +3
Query: 120 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCS 257
GRL++KA+F GYKRGLRNQ E+TALLK+EG R++ FY GK C+
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCA 48
>AY871273-1|AAX11429.1| 110|Homo sapiens cell growth-inhibiting
protein 33 protein.
Length = 110
Score = 101 bits (241), Expect = 2e-21
Identities = 48/65 (73%), Positives = 52/65 (80%)
Frame = +2
Query: 257 YVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVML 436
YVY+AK T PGG K K R IWGKVTR HGNSG VRAKF+SNLPA+A+GHRIRVML
Sbjct: 49 YVYKAKNNTVTPGG---KPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVML 105
Query: 437 YPSRI 451
YPSRI
Sbjct: 106 YPSRI 110
Score = 69.3 bits (162), Expect = 7e-12
Identities = 29/46 (63%), Positives = 37/46 (80%)
Frame = +3
Query: 120 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCS 257
GRL++KA+F GYKRGLRNQ E+TALLK+EG R++ FY GK C+
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCA 48
>X52966-1|CAA37138.1| 110|Homo sapiens protein ( Human mRNA for
ribosomal protein L35a. ).
Length = 110
Score = 98.3 bits (234), Expect = 1e-20
Identities = 47/65 (72%), Positives = 51/65 (78%)
Frame = +2
Query: 257 YVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVML 436
YVY+AK T PGG K K R IWGKVTR HGNSG V AKF+SNLPA+A+GHRIRVML
Sbjct: 49 YVYKAKNNTVTPGG---KPNKTRVIWGKVTRAHGNSGMVLAKFRSNLPAKAIGHRIRVML 105
Query: 437 YPSRI 451
YPSRI
Sbjct: 106 YPSRI 110
Score = 69.3 bits (162), Expect = 7e-12
Identities = 29/46 (63%), Positives = 37/46 (80%)
Frame = +3
Query: 120 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCS 257
GRL++KA+F GYKRGLRNQ E+TALLK+EG R++ FY GK C+
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCA 48
>AL365223-3|CAI15713.1| 96|Homo sapiens ribosomal protein L35a
pseudogene 3 protein.
Length = 96
Score = 62.9 bits (146), Expect = 6e-10
Identities = 32/50 (64%), Positives = 34/50 (68%)
Frame = +2
Query: 260 VYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQA 409
VY+AK T IPG K K R IWGKVTR H NSG V AKF SNLPA+A
Sbjct: 49 VYKAKSNTMIPGS---KPNKSRVIWGKVTRAHRNSGMVAAKFHSNLPAKA 95
Score = 61.7 bits (143), Expect = 1e-09
Identities = 26/58 (44%), Positives = 38/58 (65%)
Frame = +3
Query: 120 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCSMCTELRRGHQFP 293
GRL++K+ F GYKR L+NQ E+TALLK+EG +++ FY GK C+ + + P
Sbjct: 2 GRLWSKSFFAGYKRSLQNQREHTALLKIEGGYAQDETEFYLGKRCACVYKAKSNTMIP 59
>X94619-1|CAA64325.1| 21|Homo sapiens ribosomal protein L35a
protein.
Length = 21
Score = 38.3 bits (85), Expect = 0.016
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +3
Query: 120 GRLYAKAVFTGYKRGLRNQ 176
GRL++KA+F GYKRGLRNQ
Sbjct: 3 GRLWSKAIFAGYKRGLRNQ 21
>AK055778-1|BAB71011.1| 1113|Homo sapiens protein ( Homo sapiens
cDNA FLJ31216 fis, clone KIDNE2004084, moderately
similar to Morone saxatilis myosin heavy chain FM3A
(FM3A) mRNA. ).
Length = 1113
Score = 33.5 bits (73), Expect = 0.45
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 193 SSRLKEQKTVMMQSFMLASIALCVQS*EEDTNSRRSPWQKNQAACYLGQGDPPTWQL 363
S+RL+ +V +M + C Q + ++R W A LG GDPP + +
Sbjct: 192 STRLRRNTSVGTPFWMAPEVIACEQQYDSSYDARCDVWSLGITAIELGDGDPPLFDM 248
>AF391558-1|AAO13803.1| 1192|Homo sapiens myosin IIIB variant
MYO3B.5 protein.
Length = 1192
Score = 33.5 bits (73), Expect = 0.45
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 193 SSRLKEQKTVMMQSFMLASIALCVQS*EEDTNSRRSPWQKNQAACYLGQGDPPTWQL 363
S+RL+ +V +M + C Q + ++R W A LG GDPP + +
Sbjct: 183 STRLRRNTSVGTPFWMAPEVIACEQQYDSSYDARCDVWSLGITAIELGDGDPPLFDM 239
>AF391557-1|AAO13802.1| 1275|Homo sapiens myosin IIIB variant
MYO3B.4 protein.
Length = 1275
Score = 33.5 bits (73), Expect = 0.45
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 193 SSRLKEQKTVMMQSFMLASIALCVQS*EEDTNSRRSPWQKNQAACYLGQGDPPTWQL 363
S+RL+ +V +M + C Q + ++R W A LG GDPP + +
Sbjct: 183 STRLRRNTSVGTPFWMAPEVIACEQQYDSSYDARCDVWSLGITAIELGDGDPPLFDM 239
>AF391556-1|AAO13801.1| 1314|Homo sapiens myosin IIIB variant
MYO3B.3 protein.
Length = 1314
Score = 33.5 bits (73), Expect = 0.45
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 193 SSRLKEQKTVMMQSFMLASIALCVQS*EEDTNSRRSPWQKNQAACYLGQGDPPTWQL 363
S+RL+ +V +M + C Q + ++R W A LG GDPP + +
Sbjct: 183 STRLRRNTSVGTPFWMAPEVIACEQQYDSSYDARCDVWSLGITAIELGDGDPPLFDM 239
>AF391555-1|AAO13800.1| 1341|Homo sapiens myosin IIIB variant
MYO3B.2 protein.
Length = 1341
Score = 33.5 bits (73), Expect = 0.45
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 193 SSRLKEQKTVMMQSFMLASIALCVQS*EEDTNSRRSPWQKNQAACYLGQGDPPTWQL 363
S+RL+ +V +M + C Q + ++R W A LG GDPP + +
Sbjct: 183 STRLRRNTSVGTPFWMAPEVIACEQQYDSSYDARCDVWSLGITAIELGDGDPPLFDM 239
>AF391554-1|AAO13799.1| 1251|Homo sapiens myosin IIIB variant
MYO3B.1 protein.
Length = 1251
Score = 33.5 bits (73), Expect = 0.45
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 193 SSRLKEQKTVMMQSFMLASIALCVQS*EEDTNSRRSPWQKNQAACYLGQGDPPTWQL 363
S+RL+ +V +M + C Q + ++R W A LG GDPP + +
Sbjct: 183 STRLRRNTSVGTPFWMAPEVIACEQQYDSSYDARCDVWSLGITAIELGDGDPPLFDM 239
>AF369908-1|AAL57233.1| 1278|Homo sapiens myosin IIIB protein.
Length = 1278
Score = 33.5 bits (73), Expect = 0.45
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 193 SSRLKEQKTVMMQSFMLASIALCVQS*EEDTNSRRSPWQKNQAACYLGQGDPPTWQL 363
S+RL+ +V +M + C Q + ++R W A LG GDPP + +
Sbjct: 183 STRLRRNTSVGTPFWMAPEVIACEQQYDSSYDARCDVWSLGITAIELGDGDPPLFDM 239
>AC114794-1|AAY24159.1| 249|Homo sapiens unknown protein.
Length = 249
Score = 33.5 bits (73), Expect = 0.45
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +1
Query: 193 SSRLKEQKTVMMQSFMLASIALCVQS*EEDTNSRRSPWQKNQAACYLGQGDPPTWQL 363
S+RL+ +V +M + C Q + ++R W A LG GDPP + +
Sbjct: 183 STRLRRNTSVGTPFWMAPEVIACEQQYDSSYDARCDVWSLGITAIELGDGDPPLFDM 239
>X65964-1|CAA46780.1| 1618|Homo sapiens nestin protein.
Length = 1618
Score = 29.9 bits (64), Expect = 5.5
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 346 GHLAPDSTQLGFF-ATGTSGNWCPLLSSVH 260
G PDST LGF+ + TS W PL S H
Sbjct: 1291 GETLPDSTPLGFYLRSPTSPRWTPLESRGH 1320
>DQ926304-1|ABK81522.1| 127|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 127
Score = 29.5 bits (63), Expect = 7.3
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +3
Query: 120 GRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCSMCTELR 275
G YA AV G R+ +NT L++ K + AV+Y G+H + T +R
Sbjct: 56 GTHYADAV-KGRFTISRDSSKNTLYLQMNSLKVEDTAVYYCGRHPPLNTMIR 106
>BC125272-1|AAI25273.1| 625|Homo sapiens MYO3A protein protein.
Length = 625
Score = 29.5 bits (63), Expect = 7.3
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +1
Query: 193 SSRLKEQKTVMMQSFMLASIALCVQS*EEDTNSRRSPWQKNQAACYLGQGDPP 351
S+R + +V +M + C Q + ++R W A LG GDPP
Sbjct: 177 STRHRRNTSVGTPFWMAPEVIACEQQLDTTYDARCDTWSLGITAIELGDGDPP 229
>BC119811-1|AAI19812.1| 664|Homo sapiens MYO3A protein protein.
Length = 664
Score = 29.5 bits (63), Expect = 7.3
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +1
Query: 193 SSRLKEQKTVMMQSFMLASIALCVQS*EEDTNSRRSPWQKNQAACYLGQGDPP 351
S+R + +V +M + C Q + ++R W A LG GDPP
Sbjct: 177 STRHRRNTSVGTPFWMAPEVIACEQQLDTTYDARCDTWSLGITAIELGDGDPP 229
>BC045538-1|AAH45538.1| 247|Homo sapiens MYO3A protein protein.
Length = 247
Score = 29.5 bits (63), Expect = 7.3
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +1
Query: 193 SSRLKEQKTVMMQSFMLASIALCVQS*EEDTNSRRSPWQKNQAACYLGQGDPP 351
S+R + +V +M + C Q + ++R W A LG GDPP
Sbjct: 177 STRHRRNTSVGTPFWMAPEVIACEQQLDTTYDARCDTWSLGITAIELGDGDPP 229
>BC036079-1|AAH36079.1| 247|Homo sapiens MYO3A protein protein.
Length = 247
Score = 29.5 bits (63), Expect = 7.3
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +1
Query: 193 SSRLKEQKTVMMQSFMLASIALCVQS*EEDTNSRRSPWQKNQAACYLGQGDPP 351
S+R + +V +M + C Q + ++R W A LG GDPP
Sbjct: 177 STRHRRNTSVGTPFWMAPEVIACEQQLDTTYDARCDTWSLGITAIELGDGDPP 229
>AY101367-1|AAM34500.1| 1616|Homo sapiens myosin IIIA protein.
Length = 1616
Score = 29.5 bits (63), Expect = 7.3
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +1
Query: 193 SSRLKEQKTVMMQSFMLASIALCVQS*EEDTNSRRSPWQKNQAACYLGQGDPP 351
S+R + +V +M + C Q + ++R W A LG GDPP
Sbjct: 177 STRHRRNTSVGTPFWMAPEVIACEQQLDTTYDARCDTWSLGITAIELGDGDPP 229
>AL391812-1|CAI17380.1| 1616|Homo sapiens myosin IIIA protein.
Length = 1616
Score = 29.5 bits (63), Expect = 7.3
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +1
Query: 193 SSRLKEQKTVMMQSFMLASIALCVQS*EEDTNSRRSPWQKNQAACYLGQGDPP 351
S+R + +V +M + C Q + ++R W A LG GDPP
Sbjct: 177 STRHRRNTSVGTPFWMAPEVIACEQQLDTTYDARCDTWSLGITAIELGDGDPP 229
>AL360217-1|CAD13206.2| 1616|Homo sapiens myosin IIIA protein.
Length = 1616
Score = 29.5 bits (63), Expect = 7.3
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +1
Query: 193 SSRLKEQKTVMMQSFMLASIALCVQS*EEDTNSRRSPWQKNQAACYLGQGDPP 351
S+R + +V +M + C Q + ++R W A LG GDPP
Sbjct: 177 STRHRRNTSVGTPFWMAPEVIACEQQLDTTYDARCDTWSLGITAIELGDGDPP 229
>AL358612-3|CAH73816.1| 247|Homo sapiens myosin IIIA protein.
Length = 247
Score = 29.5 bits (63), Expect = 7.3
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +1
Query: 193 SSRLKEQKTVMMQSFMLASIALCVQS*EEDTNSRRSPWQKNQAACYLGQGDPP 351
S+R + +V +M + C Q + ++R W A LG GDPP
Sbjct: 177 STRHRRNTSVGTPFWMAPEVIACEQQLDTTYDARCDTWSLGITAIELGDGDPP 229
>AL358612-1|CAH73814.1| 1616|Homo sapiens myosin IIIA protein.
Length = 1616
Score = 29.5 bits (63), Expect = 7.3
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +1
Query: 193 SSRLKEQKTVMMQSFMLASIALCVQS*EEDTNSRRSPWQKNQAACYLGQGDPP 351
S+R + +V +M + C Q + ++R W A LG GDPP
Sbjct: 177 STRHRRNTSVGTPFWMAPEVIACEQQLDTTYDARCDTWSLGITAIELGDGDPP 229
>AL162503-4|CAH73661.1| 1616|Homo sapiens myosin IIIA protein.
Length = 1616
Score = 29.5 bits (63), Expect = 7.3
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +1
Query: 193 SSRLKEQKTVMMQSFMLASIALCVQS*EEDTNSRRSPWQKNQAACYLGQGDPP 351
S+R + +V +M + C Q + ++R W A LG GDPP
Sbjct: 177 STRHRRNTSVGTPFWMAPEVIACEQQLDTTYDARCDTWSLGITAIELGDGDPP 229
>AF229172-1|AAF70861.1| 1615|Homo sapiens class III myosin protein.
Length = 1615
Score = 29.5 bits (63), Expect = 7.3
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +1
Query: 193 SSRLKEQKTVMMQSFMLASIALCVQS*EEDTNSRRSPWQKNQAACYLGQGDPP 351
S+R + +V +M + C Q + ++R W A LG GDPP
Sbjct: 177 STRHRRNTSVGTPFWMAPEVIACEQQLDTTYDARCDTWSLGITAIELGDGDPP 229
>AM082137-1|CAL06283.1| 101|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 101
Score = 29.1 bits (62), Expect = 9.7
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 102 ASKPRHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGK 248
A R GR Y TG R+ +NT L++ G + + AV+Y K
Sbjct: 53 AMSGRGGRTYYAGSVTGRFSISRDNSKNTLYLQMNGLRVEDTAVYYCAK 101
>AL691429-1|CAI17262.1| 165|Homo sapiens novel protein protein.
Length = 165
Score = 29.1 bits (62), Expect = 9.7
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = -3
Query: 433 HHSYSVSHSLGREVRLELGSDTARVAMWAGHLAPDSTQLGFF-ATGTSGNWCPLLSSVHI 257
HH+ SV + G RL +D R+ +WA LA + + G + T+ +C L +V +
Sbjct: 104 HHTVSVDKAAGHLRRLGNENDKERIQIWA-ELAKVARKQGVWDVCRTASRFCLLYDNVKV 162
Query: 256 EQ 251
++
Sbjct: 163 KK 164
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,289,136
Number of Sequences: 237096
Number of extensions: 1772901
Number of successful extensions: 13113
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 12969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13106
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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