Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1086
         (516 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071732-1|AAL49354.1|  157|Drosophila melanogaster RH44960p pro...    95   5e-20
AY071136-1|AAL48758.1|  157|Drosophila melanogaster RE17737p pro...    95   5e-20
AE014297-251|AAF52027.1|  157|Drosophila melanogaster CG2099-PA ...    95   5e-20
DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster calmodulin-b...    30   1.6  
AE013599-870|AAF58934.2| 1504|Drosophila melanogaster CG8809-PA ...    29   2.8  
AY119089-1|AAM50949.1|  580|Drosophila melanogaster LP11585p pro...    29   3.7  
AE014297-613|AAF54019.2|  540|Drosophila melanogaster CG10113-PA...    29   3.7  
AE014134-861|AAF52209.1|  600|Drosophila melanogaster CG9121-PA ...    28   8.6  

>AY071732-1|AAL49354.1|  157|Drosophila melanogaster RH44960p
           protein.
          Length = 157

 Score = 95.1 bits (226), Expect = 5e-20
 Identities = 41/66 (62%), Positives = 54/66 (81%)
 Frame = +2

Query: 254 LYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVM 433
           +YVY+A+ +  +P  P  +KT++RA+WGKVTR HGN+G+VRA+F  NLP  AMGHRIR+M
Sbjct: 93  VYVYKAETKKCVPQHPE-RKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHAMGHRIRIM 151

Query: 434 LYPSRI 451
           LYPSRI
Sbjct: 152 LYPSRI 157



 Score = 81.4 bits (192), Expect = 7e-16
 Identities = 37/66 (56%), Positives = 44/66 (66%)
 Frame = +3

Query: 114 RHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCSMCTELRRGHQFP 293
           RHGRL+AKAVFTGYKRGLRNQHEN A+LK+EGA+ +    FY GK C    +       P
Sbjct: 46  RHGRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVP 105

Query: 294 EVPVAK 311
           + P  K
Sbjct: 106 QHPERK 111


>AY071136-1|AAL48758.1|  157|Drosophila melanogaster RE17737p
           protein.
          Length = 157

 Score = 95.1 bits (226), Expect = 5e-20
 Identities = 41/66 (62%), Positives = 54/66 (81%)
 Frame = +2

Query: 254 LYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVM 433
           +YVY+A+ +  +P  P  +KT++RA+WGKVTR HGN+G+VRA+F  NLP  AMGHRIR+M
Sbjct: 93  VYVYKAETKKCVPQHPE-RKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHAMGHRIRIM 151

Query: 434 LYPSRI 451
           LYPSRI
Sbjct: 152 LYPSRI 157



 Score = 81.4 bits (192), Expect = 7e-16
 Identities = 37/66 (56%), Positives = 44/66 (66%)
 Frame = +3

Query: 114 RHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCSMCTELRRGHQFP 293
           RHGRL+AKAVFTGYKRGLRNQHEN A+LK+EGA+ +    FY GK C    +       P
Sbjct: 46  RHGRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVP 105

Query: 294 EVPVAK 311
           + P  K
Sbjct: 106 QHPERK 111


>AE014297-251|AAF52027.1|  157|Drosophila melanogaster CG2099-PA
           protein.
          Length = 157

 Score = 95.1 bits (226), Expect = 5e-20
 Identities = 41/66 (62%), Positives = 54/66 (81%)
 Frame = +2

Query: 254 LYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVM 433
           +YVY+A+ +  +P  P  +KT++RA+WGKVTR HGN+G+VRA+F  NLP  AMGHRIR+M
Sbjct: 93  VYVYKAETKKCVPQHPE-RKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHAMGHRIRIM 151

Query: 434 LYPSRI 451
           LYPSRI
Sbjct: 152 LYPSRI 157



 Score = 81.4 bits (192), Expect = 7e-16
 Identities = 37/66 (56%), Positives = 44/66 (66%)
 Frame = +3

Query: 114 RHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAGKHCSMCTELRRGHQFP 293
           RHGRL+AKAVFTGYKRGLRNQHEN A+LK+EGA+ +    FY GK C    +       P
Sbjct: 46  RHGRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVP 105

Query: 294 EVPVAK 311
           + P  K
Sbjct: 106 QHPERK 111


>DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster
            calmodulin-binding transcriptionactivator protein.
          Length = 2009

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +1

Query: 64   QQLLWSPQRSFAKHQSPATAGCTQRPYSQDISVVYATSTRTP 189
            + +  SP+   +   +PAT+     P S  +S+  +TST TP
Sbjct: 954  EAMCMSPEHRSSSQPTPATSSAGSIPSSVSVSISVSTSTHTP 995


>AE013599-870|AAF58934.2| 1504|Drosophila melanogaster CG8809-PA
           protein.
          Length = 1504

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +1

Query: 64  QQLLWSPQRSFAKHQSPATAGCTQRPYSQDISVVYATSTRTP 189
           + +  SP+   +   +PAT+     P S  +S+  +TST TP
Sbjct: 405 EAMCMSPEHRSSSQPTPATSSAGSIPSSVSVSISVSTSTPTP 446


>AY119089-1|AAM50949.1|  580|Drosophila melanogaster LP11585p
           protein.
          Length = 580

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 21/76 (27%), Positives = 33/76 (43%)
 Frame = +1

Query: 76  WSPQRSFAKHQSPATAGCTQRPYSQDISVVYATSTRTPLSSRLKEQKTVMMQSFMLASIA 255
           WSP R  + +   A    TQ+ Y+  +    +     P + R   +++ + +S  LAS A
Sbjct: 30  WSPDRLGSMYSDWAMFFFTQQRYANGLRYFNSALDLNPFNERALMRRSQLKRSMGLASEA 89

Query: 256 LCVQS*EEDTNSRRSP 303
           L   S  ED    R P
Sbjct: 90  LKDCSRAEDLLMSRKP 105


>AE014297-613|AAF54019.2|  540|Drosophila melanogaster CG10113-PA
           protein.
          Length = 540

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 21/76 (27%), Positives = 33/76 (43%)
 Frame = +1

Query: 76  WSPQRSFAKHQSPATAGCTQRPYSQDISVVYATSTRTPLSSRLKEQKTVMMQSFMLASIA 255
           WSP R  + +   A    TQ+ Y+  +    +     P + R   +++ + +S  LAS A
Sbjct: 30  WSPDRLGSMYSDWAMFFFTQQRYANGLRYFNSALDLNPFNERALMRRSQLKRSMGLASEA 89

Query: 256 LCVQS*EEDTNSRRSP 303
           L   S  ED    R P
Sbjct: 90  LKDCSRAEDLLMSRKP 105


>AE014134-861|AAF52209.1|  600|Drosophila melanogaster CG9121-PA
           protein.
          Length = 600

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = -3

Query: 289 NWCPLLSSVHIEQCLPA*KTASLRSFAPSTLRRAVFSCWLRRPRL 155
           +W P       E CL   +  SL+S A   +RR++  C   RP +
Sbjct: 499 DWPPARLEFEREMCLLGTQPRSLQSLARLEIRRSLLRCLQTRPEV 543


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,313,245
Number of Sequences: 53049
Number of extensions: 496369
Number of successful extensions: 973
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 973
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)