Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1082
         (644 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    26   0.23 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     24   0.93 
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   1.6  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.2  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   6.6  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   6.6  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   6.6  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   6.6  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   6.6  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   6.6  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   6.6  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   6.6  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   8.7  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   8.7  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -1

Query: 77  YTEILELTSQGGWRI 33
           Y EI+EL  +GGW++
Sbjct: 299 YNEIVELQKEGGWKV 313


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -1

Query: 110 VSV*RVGSRCNYTEILELTSQGGWRIYVVD 21
           V++ RVGS  N +EIL++   G  +  +VD
Sbjct: 544 VAMERVGSHVNVSEILKMDQNGQIKRNLVD 573



 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 253 FSAFLCYVHKYFIVNCKLYDYDIES 327
           F  F+  V +    + KLYDYD+ S
Sbjct: 190 FGPFIVRVPEEDNPHAKLYDYDLSS 214


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -3

Query: 540 YCTLYIFFLN*VHKHDIKIVYI*KNIL 460
           Y  +Y+FF +      + +VY+ KN++
Sbjct: 271 YIVMYVFFFHLSDVRYVMVVYLLKNVV 297


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/38 (26%), Positives = 22/38 (57%)
 Frame = -3

Query: 426 RYFATLLEIHTQSDVIYCTSNLHEHQFMLILTKRFDII 313
           +Y   ++ +   + ++Y T+NL   Q + I+T+  D+I
Sbjct: 44  KYTYNIVAVSLTAYMVYITTNLRITQKLSIVTQLADLI 81


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 77  YTEILELTSQGGW 39
           Y EI+E  + GGW
Sbjct: 303 YNEIVEAQNAGGW 315


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 62  LRSQYSYNGCPPFKPKRITASQ 127
           L S  S +  PP KP   TASQ
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQ 164


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 62  LRSQYSYNGCPPFKPKRITASQ 127
           L S  S +  PP KP   TASQ
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQ 164


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 62  LRSQYSYNGCPPFKPKRITASQ 127
           L S  S +  PP KP   TASQ
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQ 164


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 62  LRSQYSYNGCPPFKPKRITASQ 127
           L S  S +  PP KP   TASQ
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQ 164


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 62  LRSQYSYNGCPPFKPKRITASQ 127
           L S  S +  PP KP   TASQ
Sbjct: 99  LTSPLSVSTSPPGKPATSTASQ 120


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 62  LRSQYSYNGCPPFKPKRITASQ 127
           L S  S +  PP KP   TASQ
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQ 164


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = +2

Query: 62  LRSQYSYNGCPPFKPKRITASQ 127
           L S  S +  PP KP   TASQ
Sbjct: 143 LTSPLSVSTSPPGKPATSTASQ 164


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 546 HLYCTLYIFFLN 511
           HL+C LY+  L+
Sbjct: 172 HLFCVLYVVLLH 183


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 546 HLYCTLYIFFLN 511
           HL+C LY+  L+
Sbjct: 172 HLFCVLYVVLLH 183


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,554
Number of Sequences: 336
Number of extensions: 3318
Number of successful extensions: 18
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)