BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1082
(644 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15150-1|CAA33247.1| 923|Drosophila melanogaster putative recep... 29 7.1
U25686-1|AAA83228.1| 1221|Drosophila melanogaster E93 protein. 29 7.1
BT010034-1|AAQ22503.1| 1188|Drosophila melanogaster LP08695p pro... 29 7.1
AY071403-1|AAL49025.1| 923|Drosophila melanogaster RE49094p pro... 29 7.1
AE014297-3075|AAF55940.3| 1165|Drosophila melanogaster CG18389-P... 29 7.1
AE013599-485|AAF59203.1| 923|Drosophila melanogaster CG1389-PA ... 29 7.1
>X15150-1|CAA33247.1| 923|Drosophila melanogaster putative receptor
tyrosine kinase protein.
Length = 923
Score = 28.7 bits (61), Expect = 7.1
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2
Query: 74 YSYNGCPPFKPKRITASQQK 133
Y+Y CPP KP+ +T +Q++
Sbjct: 286 YNYTLCPPHKPENLTVTQKQ 305
>U25686-1|AAA83228.1| 1221|Drosophila melanogaster E93 protein.
Length = 1221
Score = 28.7 bits (61), Expect = 7.1
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +3
Query: 84 TAAHPSNRNALLLHSRNRQGGG 149
+A+H +N N+ L H++N+ GGG
Sbjct: 1047 SASHINNNNSDLAHNKNKSGGG 1068
>BT010034-1|AAQ22503.1| 1188|Drosophila melanogaster LP08695p protein.
Length = 1188
Score = 28.7 bits (61), Expect = 7.1
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +3
Query: 84 TAAHPSNRNALLLHSRNRQGGG 149
+A+H +N N+ L H++N+ GGG
Sbjct: 1071 SASHINNNNSDLAHNKNKSGGG 1092
>AY071403-1|AAL49025.1| 923|Drosophila melanogaster RE49094p
protein.
Length = 923
Score = 28.7 bits (61), Expect = 7.1
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2
Query: 74 YSYNGCPPFKPKRITASQQK 133
Y+Y CPP KP+ +T +Q++
Sbjct: 286 YNYTLCPPHKPENLTVTQKQ 305
>AE014297-3075|AAF55940.3| 1165|Drosophila melanogaster CG18389-PA
protein.
Length = 1165
Score = 28.7 bits (61), Expect = 7.1
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +3
Query: 84 TAAHPSNRNALLLHSRNRQGGG 149
+A+H +N N+ L H++N+ GGG
Sbjct: 1048 SASHINNNNSDLAHNKNKSGGG 1069
>AE013599-485|AAF59203.1| 923|Drosophila melanogaster CG1389-PA
protein.
Length = 923
Score = 28.7 bits (61), Expect = 7.1
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2
Query: 74 YSYNGCPPFKPKRITASQQK 133
Y+Y CPP KP+ +T +Q++
Sbjct: 286 YNYTLCPPHKPENLTVTQKQ 305
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,598,636
Number of Sequences: 53049
Number of extensions: 520600
Number of successful extensions: 890
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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