Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1080
(641 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 146 8e-35
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 146 8e-35
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 146 8e-35
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 146 8e-35
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 146 8e-35
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 146 8e-35
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 146 8e-35
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 145 1e-34
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 81 4e-15
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 78 3e-14
AK131325-1|BAD18485.1| 281|Homo sapiens protein ( Homo sapiens ... 32 2.0
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 146 bits (353), Expect = 8e-35
Identities = 65/81 (80%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 213 TCQVAYSRIEGDHI-CALLIH 272
CQ+AY+RIEGD I CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 80.6 bits (190), Expect = 4e-15
Identities = 38/73 (52%), Positives = 42/73 (57%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 433
+CAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 434 VDNGPGAFRCYLD 472
+D PGAF CYLD
Sbjct: 135 IDGQPGAFTCYLD 147
Score = 77.8 bits (183), Expect = 3e-14
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +3
Query: 510 GAMKGAVDGGLNVPHSIKRFPGYDAESIKFNAEVHRAHIFGLHV 641
GA+KGAVDGGL++PHS KRFPGYD+ES +FNAEVHR HI G +V
Sbjct: 161 GALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNV 204
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 146 bits (353), Expect = 8e-35
Identities = 65/81 (80%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 213 TCQVAYSRIEGDHI-CALLIH 272
CQ+AY+RIEGD I CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 80.6 bits (190), Expect = 4e-15
Identities = 38/73 (52%), Positives = 42/73 (57%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 433
+CAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 434 VDNGPGAFRCYLD 472
+D PGAF CYLD
Sbjct: 135 IDGQPGAFTCYLD 147
Score = 77.8 bits (183), Expect = 3e-14
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +3
Query: 510 GAMKGAVDGGLNVPHSIKRFPGYDAESIKFNAEVHRAHIFGLHV 641
GA+KGAVDGGL++PHS KRFPGYD+ES +FNAEVHR HI G +V
Sbjct: 161 GALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNV 204
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 146 bits (353), Expect = 8e-35
Identities = 65/81 (80%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 213 TCQVAYSRIEGDHI-CALLIH 272
CQ+AY+RIEGD I CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 80.6 bits (190), Expect = 4e-15
Identities = 38/73 (52%), Positives = 42/73 (57%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 433
+CAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 434 VDNGPGAFRCYLD 472
+D PGAF CYLD
Sbjct: 135 IDGQPGAFTCYLD 147
Score = 77.8 bits (183), Expect = 3e-14
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +3
Query: 510 GAMKGAVDGGLNVPHSIKRFPGYDAESIKFNAEVHRAHIFGLHV 641
GA+KGAVDGGL++PHS KRFPGYD+ES +FNAEVHR HI G +V
Sbjct: 161 GALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNV 204
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 146 bits (353), Expect = 8e-35
Identities = 65/81 (80%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 213 TCQVAYSRIEGDHI-CALLIH 272
CQ+AY+RIEGD I CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 51.6 bits (118), Expect = 2e-06
Identities = 21/24 (87%), Positives = 24/24 (100%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAA 325
+CAAY+HELP+YGVKVGLTNYAAA
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAA 98
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 146 bits (353), Expect = 8e-35
Identities = 65/81 (80%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 213 TCQVAYSRIEGDHI-CALLIH 272
CQ+AY+RIEGD I CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 80.6 bits (190), Expect = 4e-15
Identities = 38/73 (52%), Positives = 42/73 (57%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 433
+CAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 434 VDNGPGAFRCYLD 472
+D PGAF CYLD
Sbjct: 135 IDGQPGAFTCYLD 147
Score = 77.8 bits (183), Expect = 3e-14
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +3
Query: 510 GAMKGAVDGGLNVPHSIKRFPGYDAESIKFNAEVHRAHIFGLHV 641
GA+KGAVDGGL++PHS KRFPGYD+ES +FNAEVHR HI G +V
Sbjct: 161 GALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNV 204
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 146 bits (353), Expect = 8e-35
Identities = 65/81 (80%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 213 TCQVAYSRIEGDHI-CALLIH 272
CQ+AY+RIEGD I CA H
Sbjct: 61 ICQIAYARIEGDMIVCAAYAH 81
Score = 80.6 bits (190), Expect = 4e-15
Identities = 38/73 (52%), Positives = 42/73 (57%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 433
+CAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 434 VDNGPGAFRCYLD 472
+D PGAF CYLD
Sbjct: 135 IDGQPGAFTCYLD 147
Score = 77.8 bits (183), Expect = 3e-14
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +3
Query: 510 GAMKGAVDGGLNVPHSIKRFPGYDAESIKFNAEVHRAHIFGLHV 641
GA+KGAVDGGL++PHS KRFPGYD+ES +FNAEVHR HI G +V
Sbjct: 161 GALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNV 204
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 146 bits (353), Expect = 8e-35
Identities = 65/81 (80%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 67
Query: 213 TCQVAYSRIEGDHI-CALLIH 272
CQ+AY+RIEGD I CA H
Sbjct: 68 ICQIAYARIEGDMIVCAAYAH 88
Score = 80.6 bits (190), Expect = 4e-15
Identities = 38/73 (52%), Positives = 42/73 (57%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 433
+CAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 82 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 141
Query: 434 VDNGPGAFRCYLD 472
+D PGAF CYLD
Sbjct: 142 IDGQPGAFTCYLD 154
Score = 77.8 bits (183), Expect = 3e-14
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +3
Query: 510 GAMKGAVDGGLNVPHSIKRFPGYDAESIKFNAEVHRAHIFGLHV 641
GA+KGAVDGGL++PHS KRFPGYD+ES +FNAEVHR HI G +V
Sbjct: 168 GALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNV 211
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 145 bits (352), Expect = 1e-34
Identities = 65/81 (80%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Frame = +3
Query: 33 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 212
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 213 TCQVAYSRIEGDHI-CALLIH 272
CQ+AY+RIEGD I CA H
Sbjct: 61 ICQIAYARIEGDMIVCARYAH 81
Score = 78.6 bits (185), Expect = 2e-14
Identities = 37/73 (50%), Positives = 41/73 (56%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 433
+CA Y+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 75 VCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 134
Query: 434 VDNGPGAFRCYLD 472
+D PGAF CYLD
Sbjct: 135 IDGQPGAFTCYLD 147
Score = 77.8 bits (183), Expect = 3e-14
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +3
Query: 510 GAMKGAVDGGLNVPHSIKRFPGYDAESIKFNAEVHRAHIFGLHV 641
GA+KGAVDGGL++PHS KRFPGYD+ES +FNAEVHR HI G +V
Sbjct: 161 GALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNV 204
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 80.6 bits (190), Expect = 4e-15
Identities = 38/73 (52%), Positives = 42/73 (57%)
Frame = +2
Query: 254 LCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 433
+CAAY+HELP+YGVKVGLTNYAAAY TG EYNVE
Sbjct: 25 VCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVES 84
Query: 434 VDNGPGAFRCYLD 472
+D PGAF CYLD
Sbjct: 85 IDGQPGAFTCYLD 97
Score = 43.2 bits (97), Expect = 8e-04
Identities = 18/31 (58%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Frame = +3
Query: 183 LIVRLSNKDVTCQVAYSRIEGDHI-CALLIH 272
+IVR++N+D+ CQ+AY+RIEGD I CA H
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAH 31
Score = 33.1 bits (72), Expect = 0.86
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = +3
Query: 510 GAMKGAVDGGLNVPH 554
GA+KGAVDGGL++PH
Sbjct: 111 GALKGAVDGGLSIPH 125
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 77.8 bits (183), Expect = 3e-14
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = +3
Query: 510 GAMKGAVDGGLNVPHSIKRFPGYDAESIKFNAEVHRAHIFGLHV 641
GA+KGAVDGGL++PHS KRFPGYD+ES +FNAEVHR HI G +V
Sbjct: 9 GALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNV 52
>AK131325-1|BAD18485.1| 281|Homo sapiens protein ( Homo sapiens
cDNA FLJ16327 fis, clone SYNOV1000256, weakly similar
to Human preferentially expressed antigen of melanoma
(PRAME) mRNA. ).
Length = 281
Score = 31.9 bits (69), Expect = 2.0
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +3
Query: 348 HEDCFKDLDLTPYTLAQQMSQVMNTMLNLSTMDQEHLDVIWMWLSTHH 491
H C K LDL+ L+ + + T+L + +HLD+ WL H
Sbjct: 130 HTTCLKKLDLSVNDLSYMIPGPLGTLLRAVSGTLQHLDLKHCWLKDAH 177
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,765,083
Number of Sequences: 237096
Number of extensions: 2052200
Number of successful extensions: 7770
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7762
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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