Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1079
(643 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q96CW1 Cluster: AP-2 complex subunit mu-1; n=94; Fungi/... 157 3e-37
UniRef50_P35603 Cluster: AP-2 complex subunit mu; n=23; Eukaryot... 147 2e-34
UniRef50_Q3E8F7 Cluster: Uncharacterized protein At5g46630.2; n=... 83 7e-15
UniRef50_Q22V00 Cluster: Adaptor complexes medium subunit family... 77 5e-13
UniRef50_Q6CC50 Cluster: Yarrowia lipolytica chromosome C of str... 75 2e-12
UniRef50_Q00U04 Cluster: Clathrin adaptor complexes medium subun... 74 3e-12
UniRef50_Q1EQ16 Cluster: Mu 2 subunit isoform 2; n=1; Entamoeba ... 69 1e-10
UniRef50_Q6CUL9 Cluster: Similar to sp|Q99186 Saccharomyces cere... 66 7e-10
UniRef50_Q09718 Cluster: AP-2 complex subunit mu; n=1; Schizosac... 64 3e-09
UniRef50_A2FR45 Cluster: Mu adaptin, putative; n=1; Trichomonas ... 62 1e-08
UniRef50_Q4DZV1 Cluster: Clathrin coat assembly protein, putativ... 60 3e-08
UniRef50_Q99186 Cluster: AP-2 complex subunit mu; n=2; Saccharom... 60 4e-08
UniRef50_Q7QZ95 Cluster: GLP_567_48751_50055; n=2; Giardia intes... 59 8e-08
UniRef50_Q9BXS5 Cluster: AP-1 complex subunit mu-1; n=137; Eukar... 58 1e-07
UniRef50_Q22B93 Cluster: Adaptor complexes medium subunit family... 55 1e-06
UniRef50_Q014Q3 Cluster: Clathrin adaptor complexes medium subun... 54 3e-06
UniRef50_Q5A2L1 Cluster: Potential clathrin-associated protein A... 54 4e-06
UniRef50_Q4QBN3 Cluster: Adaptor complex AP-1 medium subunit, pu... 53 7e-06
UniRef50_Q759G1 Cluster: ADR315Wp; n=1; Eremothecium gossypii|Re... 53 7e-06
UniRef50_Q9SGX7 Cluster: F20B24.16; n=4; Magnoliophyta|Rep: F20B... 51 3e-05
UniRef50_Q7RKU6 Cluster: Clathrin coat assembly protein ap54; n=... 51 3e-05
UniRef50_Q4Q1B6 Cluster: Clathrin coat assembly protein-like pro... 50 4e-05
UniRef50_A2ER69 Cluster: Adaptor complexes medium subunit family... 50 4e-05
UniRef50_A5E396 Cluster: AP-1 complex subunit mu-1; n=6; Sacchar... 50 4e-05
UniRef50_A3LVW0 Cluster: Predicted protein; n=2; Pichia|Rep: Pre... 50 6e-05
UniRef50_Q00776 Cluster: AP-1 complex subunit mu-1 (Mu(1)-adapti... 45 0.001
UniRef50_Q6C119 Cluster: Similar to sp|Q00776 Saccharomyces cere... 44 0.002
UniRef50_Q4N7V8 Cluster: Clathrin medium chain, putative; n=6; A... 44 0.003
UniRef50_A0BJZ5 Cluster: Chromosome undetermined scaffold_111, w... 43 0.007
UniRef50_A7ST88 Cluster: Predicted protein; n=1; Nematostella ve... 42 0.013
UniRef50_A7AS46 Cluster: Clathrin coat adaptor subunit, putative... 42 0.013
UniRef50_Q5CWB6 Cluster: Clathrin coat assembly protein AP50; n=... 38 0.27
UniRef50_A2DPT4 Cluster: Adaptor complexes medium subunit family... 37 0.36
UniRef50_Q4RWQ3 Cluster: Chromosome 15 SCAF14981, whole genome s... 37 0.48
UniRef50_Q4UEZ8 Cluster: Clathrin-coat assembly protein, putativ... 36 0.63
UniRef50_Q0DG99 Cluster: Os05g0545200 protein; n=4; Oryza sativa... 34 3.4
UniRef50_A7QPG3 Cluster: Chromosome chr18 scaffold_137, whole ge... 34 3.4
UniRef50_Q7JP11 Cluster: Putative uncharacterized protein; n=4; ... 33 4.4
UniRef50_A5K403 Cluster: Clathrin coat assembly protein AP50, pu... 33 4.4
>UniRef50_Q96CW1 Cluster: AP-2 complex subunit mu-1; n=94;
Fungi/Metazoa group|Rep: AP-2 complex subunit mu-1 -
Homo sapiens (Human)
Length = 435
Score = 157 bits (380), Expect = 3e-37
Identities = 72/84 (85%), Positives = 78/84 (92%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDTKK 182
IEV+IPTPLNTSGVQ+IC+KGKAKYKASENAIVWKIKRMAGMKE+Q+SAEI LL T+ KK
Sbjct: 320 IEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPTNDKK 379
Query: 183 KWTRPPISMGFEVPFAPSGFKVRY 254
KW RPPISM FEVPFAPSG KVRY
Sbjct: 380 KWARPPISMNFEVPFAPSGLKVRY 403
Score = 74.5 bits (175), Expect = 2e-12
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +2
Query: 254 LKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 349
LKVFEPKLNYSDHDVIKWVRYIGRSG+YETRC
Sbjct: 404 LKVFEPKLNYSDHDVIKWVRYIGRSGIYETRC 435
>UniRef50_P35603 Cluster: AP-2 complex subunit mu; n=23;
Eukaryota|Rep: AP-2 complex subunit mu - Caenorhabditis
elegans
Length = 441
Score = 147 bits (356), Expect = 2e-34
Identities = 69/86 (80%), Positives = 75/86 (87%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDT-- 176
+EV+IPTP NTSGVQLIC+KGKAKYKA ENAIVWKIKRMAGMKE+Q+SAEI LL T
Sbjct: 324 LEVRIPTPPNTSGVQLICMKGKAKYKAGENAIVWKIKRMAGMKESQISAEIDLLSTGNVE 383
Query: 177 KKKWTRPPISMGFEVPFAPSGFKVRY 254
KKKW RPP+SM FEVPFAPSG KVRY
Sbjct: 384 KKKWNRPPVSMNFEVPFAPSGLKVRY 409
Score = 75.4 bits (177), Expect = 1e-12
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +2
Query: 254 LKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 349
LKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC
Sbjct: 410 LKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 441
>UniRef50_Q3E8F7 Cluster: Uncharacterized protein At5g46630.2; n=17;
Viridiplantae|Rep: Uncharacterized protein At5g46630.2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 441
Score = 82.6 bits (195), Expect = 7e-15
Identities = 41/86 (47%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLET-DTK 179
+ VKIP P T+ G+AKY S + +VWKI++ G E+ LSAEI L+ T K
Sbjct: 325 VVVKIPVPKQTAKTNFQVTTGRAKYNPSIDCLVWKIRKFPGQTESTLSAEIELISTMGEK 384
Query: 180 KKWTRPPISMGFEVP-FAPSGFKVRY 254
K WTRPPI M F+VP F SG +VR+
Sbjct: 385 KSWTRPPIQMEFQVPMFTASGLRVRF 410
>UniRef50_Q22V00 Cluster: Adaptor complexes medium subunit family
protein; n=5; Oligohymenophorea|Rep: Adaptor complexes
medium subunit family protein - Tetrahymena thermophila
SB210
Length = 433
Score = 76.6 bits (180), Expect = 5e-13
Identities = 36/87 (41%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDTKK 182
+ +K+P P NT+ G+AKY+ + IVW+IK+ G E L EI L T K
Sbjct: 321 VALKVPCPKNTANTSNTASIGRAKYEPEQGGIVWRIKKFQGETEALLRCEIVLSNTALDK 380
Query: 183 KWTRPPISMGFEVP-FAPSGFKVRY*R 260
W +PPIS+ F+VP F SG +VR+ R
Sbjct: 381 NWVKPPISLEFQVPSFTASGLRVRFLR 407
>UniRef50_Q6CC50 Cluster: Yarrowia lipolytica chromosome C of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome C of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 419
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/85 (43%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDTKK 182
+ + IPTP N + + GKAKY +S N IVWK+ R++G E L A L T K
Sbjct: 307 VVINIPTPRNAAKTTINASNGKAKYDSSTNQIVWKVSRISGGSEISLRATAELTFTTEKT 366
Query: 183 KWTRPPISMGFEVPFAP-SGFKVRY 254
W +PPISM FE+ SG VRY
Sbjct: 367 PWNKPPISMDFEITMITCSGLVVRY 391
Score = 32.7 bits (71), Expect = 7.7
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +2
Query: 254 LKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 346
LKVFE K NY+ +KWVRY+ + G YE R
Sbjct: 392 LKVFE-KSNYN---TVKWVRYLMKGGSYEIR 418
>UniRef50_Q00U04 Cluster: Clathrin adaptor complexes medium subunit
family protein; n=2; Ostreococcus|Rep: Clathrin adaptor
complexes medium subunit family protein - Ostreococcus
tauri
Length = 496
Score = 73.7 bits (173), Expect = 3e-12
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLET-DTK 179
+ V+IP P T+ + GKAKY E + WKIK++AG +E QL AE+ L T
Sbjct: 370 VRVRIPVPKLTARATIRVSAGKAKYVPEEGCLRWKIKKLAGHQELQLDAEVMLANTLSDH 429
Query: 180 KKWTRPPISMGFEVP-FAPSGFKVRY 254
K W +PPI++ F VP F SG ++R+
Sbjct: 430 KPWVQPPINIEFNVPMFTASGLRIRF 455
>UniRef50_Q1EQ16 Cluster: Mu 2 subunit isoform 2; n=1; Entamoeba
histolytica|Rep: Mu 2 subunit isoform 2 - Entamoeba
histolytica
Length = 407
Score = 68.9 bits (161), Expect = 1e-10
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDTKK 182
+ +KIP P N + + C G AKY AI+W+I R G + ++ ++ L++T +
Sbjct: 297 VRIKIPVPKNAALCKTRCTAGSAKYHPEHAAILWRISRFNGKTQQTITVDVDLVQTTQSQ 356
Query: 183 KWTRPPISMGFEVP-FAPSGFKVRY 254
+W +PPI M F +P +G ++RY
Sbjct: 357 RWDKPPILMDFVIPALTATGLQIRY 381
>UniRef50_Q6CUL9 Cluster: Similar to sp|Q99186 Saccharomyces
cerevisiae YOL062c APM4 AP-2 complex subunit; n=3;
Saccharomycetales|Rep: Similar to sp|Q99186
Saccharomyces cerevisiae YOL062c APM4 AP-2 complex
subunit - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 475
Score = 66.1 bits (154), Expect = 7e-10
Identities = 37/92 (40%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLET---- 170
+ VKIP P T GK KY A E +VWK + G E LS ++ + T
Sbjct: 358 VTVKIPVPPTTIKCDFNVSGGKCKYDAGEKCMVWKYNKYKGSTENTLSGKVAIPATSHDL 417
Query: 171 DTKKKWTRPPISMGFE-VPFAPSGFKVRY*RC 263
+W+RPPISMGFE V F+ SG VR+ +C
Sbjct: 418 SDLLRWSRPPISMGFEIVMFSNSGLVVRHLKC 449
Score = 35.9 bits (79), Expect = 0.83
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +2
Query: 254 LKVFEPKLNYSDHDVIKWVRYIGRSGLYETR 346
LK EP+LNY +KW++YI SG YE R
Sbjct: 447 LKCQEPQLNYQP---VKWIKYISHSGAYEIR 474
>UniRef50_Q09718 Cluster: AP-2 complex subunit mu; n=1;
Schizosaccharomyces pombe|Rep: AP-2 complex subunit mu -
Schizosaccharomyces pombe (Fission yeast)
Length = 446
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDTKK 182
+ +IP P N +GKA Y+ SEN I WKI R G E AE+ L T ++
Sbjct: 332 LNFRIPVPTNVVKANPRVNRGKAGYEPSENIINWKIPRFLGETELIFYAEVELSNTTNQQ 391
Query: 183 KWTRPPISMGFEV-PFAPSGFKVRY*R 260
W +PPIS+ F + F SG V+Y R
Sbjct: 392 IWAKPPISLDFNILMFTSSGLHVQYLR 418
>UniRef50_A2FR45 Cluster: Mu adaptin, putative; n=1; Trichomonas
vaginalis G3|Rep: Mu adaptin, putative - Trichomonas
vaginalis G3
Length = 426
Score = 62.1 bits (144), Expect = 1e-08
Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDTKK 182
+ +++P P + + C G+ +Y ++NA+VW IK+ G K+ L A L ++++
Sbjct: 314 VTIRVPVPPDVDTPKAQCTAGRMRYSPNDNALVWTIKQFPGRKQFSLRAHFGLPSVESEE 373
Query: 183 KWTRPPISMGFEVP-FAPSGFKVRY 254
+ ++ PI + FE+P F SG +V+Y
Sbjct: 374 EESKRPIVVNFEIPFFTVSGLRVQY 398
>UniRef50_Q4DZV1 Cluster: Clathrin coat assembly protein, putative;
n=2; Trypanosoma cruzi|Rep: Clathrin coat assembly
protein, putative - Trypanosoma cruzi
Length = 416
Score = 60.5 bits (140), Expect = 3e-08
Identities = 30/88 (34%), Positives = 54/88 (61%), Gaps = 5/88 (5%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMA-GMKETQLSAEIXLLE---T 170
+E++IP P NT+ V L +G+ ++ ++A++WK+ ++ +E L+AEI LL
Sbjct: 299 VEIRIPCPENTADVNLSVARGRVQFDGVQHAVIWKLPTLSQNDEELLLTAEIVLLAPTIA 358
Query: 171 DTKKKWTRPPISMGFEVP-FAPSGFKVR 251
+++ W+RPPI + F P SGF+V+
Sbjct: 359 TSEQVWSRPPIKISFTTPSHVLSGFRVK 386
>UniRef50_Q99186 Cluster: AP-2 complex subunit mu; n=2;
Saccharomyces cerevisiae|Rep: AP-2 complex subunit mu -
Saccharomyces cerevisiae (Baker's yeast)
Length = 491
Score = 60.1 bits (139), Expect = 4e-08
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDTK- 179
+ + IP P +T ++ G K+ ENA++W+ + G+ E LSA + + +DT
Sbjct: 375 VVLHIPVPPSTVDCKISVSNGHCKFVPEENAMIWRFNKYNGLTENTLSA-VTVSTSDTTQ 433
Query: 180 ---KKWTRPPISMGFEV-PFAPSGFKVRY 254
++WTRPPIS+ FEV F+ SG VRY
Sbjct: 434 LNLQQWTRPPISLEFEVMMFSNSGLVVRY 462
>UniRef50_Q7QZ95 Cluster: GLP_567_48751_50055; n=2; Giardia
intestinalis|Rep: GLP_567_48751_50055 - Giardia lamblia
ATCC 50803
Length = 434
Score = 59.3 bits (137), Expect = 8e-08
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Frame = +3
Query: 9 VKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDT--KK 182
V +P P N S V I GK + + A W+IK + G LS E+ + + + +
Sbjct: 322 VSVPMPSNVSDVTAIESLGKCRLRKDGQAAEWRIKSITGGTTATLSMEVQCVSSSSIDLR 381
Query: 183 KWTRPPISMGFEVP-FAPSGFKVRY*R 260
+W RPP++M F++P + SG +VRY R
Sbjct: 382 EWRRPPLAMNFDIPMYTASGIEVRYIR 408
>UniRef50_Q9BXS5 Cluster: AP-1 complex subunit mu-1; n=137;
Eukaryota|Rep: AP-1 complex subunit mu-1 - Homo sapiens
(Human)
Length = 423
Score = 58.4 bits (135), Expect = 1e-07
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDTKK 182
+E+ IP P + + G K+ + IVW IK G KE + A L + +
Sbjct: 310 VEIHIPVPNDADSPKFKTTVGSVKWVPENSEIVWSIKSFPGGKEYLMRAHFGLPSVEAED 369
Query: 183 KWTRPPISMGFEVP-FAPSGFKVRY 254
K +PPIS+ FE+P F SG +VRY
Sbjct: 370 KEGKPPISVKFEIPYFTTSGIQVRY 394
>UniRef50_Q22B93 Cluster: Adaptor complexes medium subunit family
protein; n=3; Tetrahymena thermophila|Rep: Adaptor
complexes medium subunit family protein - Tetrahymena
thermophila SB210
Length = 444
Score = 55.2 bits (127), Expect = 1e-06
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXL--LETDT 176
+E+ IP P + G +Y A + A+ WK K+ G +E ++A L + +
Sbjct: 329 VEIFIPVPDDAETPVFKAAYGTVEYVAEKEAMGWKFKQFPGQREYMMTATFHLPTVVSPN 388
Query: 177 KKKWTRPPISMGFEVP-FAPSGFKVRY 254
++K+ R PIS+ FE+P + SGF+VRY
Sbjct: 389 REKFQRMPISINFEIPYYTVSGFQVRY 415
>UniRef50_Q014Q3 Cluster: Clathrin adaptor complexes medium subunit
family protein; n=2; Ostreococcus|Rep: Clathrin adaptor
complexes medium subunit family protein - Ostreococcus
tauri
Length = 452
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDTK- 179
+ ++IP + + ++ C G Y+ ++ + W +K + G +E +L A++ L T K
Sbjct: 336 VRIEIPVAADATSPEIQCSHGSVVYQPEDDVLTWTLKNVKGKREFKLQAKLHLPSTGVKQ 395
Query: 180 -KKWTRPPISMGFEVPF-APSGFKVRY 254
++ T P+ + FEVP+ SG +V+Y
Sbjct: 396 TRRKTSVPVRVSFEVPYTTASGLQVKY 422
>UniRef50_Q5A2L1 Cluster: Potential clathrin-associated protein AP-2
complex component; n=3; Saccharomycetales|Rep: Potential
clathrin-associated protein AP-2 complex component -
Candida albicans (Yeast)
Length = 470
Score = 53.6 bits (123), Expect = 4e-06
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Frame = +3
Query: 3 IEVKIPTPLN-TSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXL-LETDT 176
+ +KIPTP T L GK K+ +N+I WK + G +E L+AEI + +D
Sbjct: 356 VSLKIPTPRGGTILSNLSSSIGKTKFHPEDNSISWKCNKFFGEQEHVLTAEIEVNSSSDE 415
Query: 177 KKKWTRPPISMGFEVP-FAPSGFKVRY*R 260
WTRPPI + F + F+ SG V++ R
Sbjct: 416 LLYWTRPPIKLDFFLDMFSSSGLTVKFLR 444
>UniRef50_Q4QBN3 Cluster: Adaptor complex AP-1 medium subunit,
putative; n=8; Trypanosomatidae|Rep: Adaptor complex
AP-1 medium subunit, putative - Leishmania major
Length = 433
Score = 52.8 bits (121), Expect = 7e-06
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXL--LETDT 176
+EV IP P + Q G +Y NA++W + ++AG + SAE L + +
Sbjct: 318 MEVYIPIPSDADCPQSNSQTGHLQYAPQMNALIWNLGKIAGNRHCSCSAEFHLPSIRSSD 377
Query: 177 KKKWTRPPISMGFEVP-FAPSGFKVRY 254
K ++ P+ + F +P FA SGF+VRY
Sbjct: 378 MKDLSKMPVKVRFVIPYFAASGFQVRY 404
>UniRef50_Q759G1 Cluster: ADR315Wp; n=1; Eremothecium gossypii|Rep:
ADR315Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 492
Score = 52.8 bits (121), Expect = 7e-06
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLE----T 170
+E+ IP P T ++ GK K+ ENAI+WKI + G+ E LSA E
Sbjct: 338 VELYIPAPPYTISAKVNVSCGKCKFVPEENAIIWKIHKFHGLTENTLSAVTIADEQGHYA 397
Query: 171 DTKKKWTRPPISMGFEV 221
+W RPPISM E+
Sbjct: 398 QVLDQWPRPPISMKLEI 414
>UniRef50_Q9SGX7 Cluster: F20B24.16; n=4; Magnoliophyta|Rep:
F20B24.16 - Arabidopsis thaliana (Mouse-ear cress)
Length = 411
Score = 50.8 bits (116), Expect = 3e-05
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXL--LETDT 176
+E+++P P + + G A Y ++A+VWKI+ G KE L A+ L + +
Sbjct: 296 VEIELPVPTDAYNPDVRTSLGSAAYAPEKDALVWKIQYFYGNKEHTLKADFHLPSIAAEE 355
Query: 177 KKKWTRPPISMGFEVP-FAPSGFKVRY 254
+ PI + FE+P F SG +VRY
Sbjct: 356 ATPERKAPIRVKFEIPKFIVSGIQVRY 382
>UniRef50_Q7RKU6 Cluster: Clathrin coat assembly protein ap54; n=8;
Eukaryota|Rep: Clathrin coat assembly protein ap54 -
Plasmodium yoelii yoelii
Length = 459
Score = 50.8 bits (116), Expect = 3e-05
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXL---LETD 173
+E +P P + G KY ++ ++WKIK+ G KE ++A+ L + +
Sbjct: 343 VEFHLPVPADVDSPHFQTYIGTVKYYPDKDILLWKIKQFQGQKEYIMNAQFGLPSIVSNE 402
Query: 174 TKKKWTRPPISMGFEVP-FAPSGFKVRY 254
K + + P+++ FE+P F SG VRY
Sbjct: 403 NKDIYYKRPVNVKFEIPYFTVSGITVRY 430
>UniRef50_Q4Q1B6 Cluster: Clathrin coat assembly protein-like
protein; n=3; Leishmania|Rep: Clathrin coat assembly
protein-like protein - Leishmania major
Length = 438
Score = 50.4 bits (115), Expect = 4e-05
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLL--ETDT 176
++V + P NT+ ++ GKAKY +AIVWK+ + +E AEI + +T
Sbjct: 323 VQVSVACPDNTATAEVKVGHGKAKYDPVSHAIVWKLPEVKSGEEIAFFAEIRQITPTENT 382
Query: 177 KKKWTRPPISMGFE-VPFAPSGFKV 248
+ WT+PPI + F+ V + +G ++
Sbjct: 383 ELLWTKPPIRIAFQCVSLSLTGLRI 407
>UniRef50_A2ER69 Cluster: Adaptor complexes medium subunit family
protein; n=1; Trichomonas vaginalis G3|Rep: Adaptor
complexes medium subunit family protein - Trichomonas
vaginalis G3
Length = 433
Score = 50.4 bits (115), Expect = 4e-05
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Frame = +3
Query: 9 VKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDTKKKW 188
VKIP P N S Q+ +GK + +NA++WKI AG + ++ + L + T +
Sbjct: 319 VKIPMPENASETQIEQSQGKGVFVGEQNAVIWKINGFAGKTQADITIYVTCLASTTNESP 378
Query: 189 T---RPPISMGFEVP-FAPSGFKVRY 254
+ + PIS F +P + SG ++Y
Sbjct: 379 SLKIKDPISCEFNIPMLSASGLALQY 404
>UniRef50_A5E396 Cluster: AP-1 complex subunit mu-1; n=6;
Saccharomycetales|Rep: AP-1 complex subunit mu-1 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 445
Score = 50.4 bits (115), Expect = 4e-05
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXL--LETDT 176
+EV IP P + + G K+ ++ +VWK+K G K +SAE+ L + DT
Sbjct: 328 VEVIIPIPDDADSPKFNPEYGSVKWIPEKSCLVWKLKTFPGGKLFTMSAELGLPAVMDDT 387
Query: 177 KKKWTRPPISMGFEVP-FAPSGFKVRY*R 260
+ ++ PI + F +P F SG +VRY R
Sbjct: 388 ENILSKKPIKVNFSIPYFTTSGIQVRYLR 416
>UniRef50_A3LVW0 Cluster: Predicted protein; n=2; Pichia|Rep:
Predicted protein - Pichia stipitis (Yeast)
Length = 465
Score = 49.6 bits (113), Expect = 6e-05
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 15/99 (15%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLET--DT 176
+++K+PTP GK+K+ +N I+WK + G +E L+AE+ L + DT
Sbjct: 339 VQIKVPTPKGVLDSYSSNSAGKSKFHPEDNVILWKFNKFFGEQEHVLTAEVELADNSHDT 398
Query: 177 KKK------------WTRPPISMGFEVP-FAPSGFKVRY 254
++ W+RPPI + F + F+ SG V++
Sbjct: 399 SQQMAQTNTTNSILNWSRPPIKLDFVIEMFSSSGLAVKF 437
>UniRef50_Q00776 Cluster: AP-1 complex subunit mu-1 (Mu(1)-adaptin);
n=5; Saccharomycetales|Rep: AP-1 complex subunit mu-1
(Mu(1)-adaptin) - Saccharomyces cerevisiae (Baker's
yeast)
Length = 475
Score = 45.2 bits (102), Expect = 0.001
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 12/96 (12%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDTKK 182
+E+ IP P + G KY ++AI+WKI+ G KE +SAE+ L +
Sbjct: 349 VEILIPVPDDADTPTFKYSHGSLKYVPEKSAILWKIRSFPGGKEYSMSAELGLPSISNNE 408
Query: 183 KWTRP-----------PISMGFEVP-FAPSGFKVRY 254
R P+ + F++P F SG +VRY
Sbjct: 409 DGNRTMPKSNAEILKGPVQIKFQIPYFTTSGIQVRY 444
>UniRef50_Q6C119 Cluster: Similar to sp|Q00776 Saccharomyces
cerevisiae YPL259c APM1 AP-1 complex subunit; n=1;
Yarrowia lipolytica|Rep: Similar to sp|Q00776
Saccharomyces cerevisiae YPL259c APM1 AP-1 complex
subunit - Yarrowia lipolytica (Candida lipolytica)
Length = 514
Score = 44.4 bits (100), Expect = 0.002
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRM-AGMKETQLSAEIXLLETDTK 179
+EV +P P + + + G Y NAI WKIK++ G KE + AEI + T+ +
Sbjct: 360 VEVFVPVPPDATSPRFRATAGTVVYMPERNAIRWKIKQLQGGGKEFSMKAEISVSRTEEQ 419
Query: 180 KK------------WTRPPISMGFEVP-FAPSGFKVRY 254
+ ++ P+ + FE+P +A SG +VRY
Sbjct: 420 GESLSELLHLNNTPQSQIPVQVTFEIPYYAMSGLQVRY 457
>UniRef50_Q4N7V8 Cluster: Clathrin medium chain, putative; n=6;
Alveolata|Rep: Clathrin medium chain, putative -
Theileria parva
Length = 452
Score = 44.0 bits (99), Expect = 0.003
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXL--LETDT 176
+E IP P + + + +G KY ++AI W +K+ G K + A L + ++
Sbjct: 337 VEFLIPVPSDVNCPEFNPTQGSVKYLPDQDAITWYVKQFQGDKVYTMFASFGLPSVSDES 396
Query: 177 KKKWTRPPISMGFEVP-FAPSGFKVRY*R 260
+ +++ P+ + FE+P + SG V++ R
Sbjct: 397 RNTFSKNPVKIKFEIPYYTVSGINVKHLR 425
>UniRef50_A0BJZ5 Cluster: Chromosome undetermined scaffold_111,
whole genome shotgun sequence; n=3;
Oligohymenophorea|Rep: Chromosome undetermined
scaffold_111, whole genome shotgun sequence - Paramecium
tetraurelia
Length = 439
Score = 42.7 bits (96), Expect = 0.007
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Frame = +3
Query: 9 VKIPTPLNTSGVQLICLKGK----AKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDT 176
V+IP P T+ +K A+Y +++ + W+IK++ G +E L ++ L T T
Sbjct: 322 VRIPIPKQTANAYPELVKNAQLETAEYDSNKKMVEWQIKKLCGGQERSLKIKLTLQATQT 381
Query: 177 KKKWTRP--PISMGFEVP-FAPSGFKVRY*R 260
+ PI+M FE+P F S +++Y R
Sbjct: 382 AHTARKEIGPIAMNFEIPMFNVSRLQIKYLR 412
>UniRef50_A7ST88 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 432
Score = 41.9 bits (94), Expect = 0.013
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKG----KAKYKASENAIVWKIKRMAGMKETQLSAEIXLLET 170
I V++P P +T L G A+YK +E ++W++K + G E ++ ++ L +
Sbjct: 324 IIVRVPVPKSTERYILSHDVGHAGHSAEYKTAEKLLLWQVKSIRGGAEVAINIKLKLKDK 383
Query: 171 DTKKKWTRPPISMGFEVP-FAPSGFKVR 251
+ P+S+ FE+P + SG ++R
Sbjct: 384 AKSARKELGPVSLDFEIPMYICSGLQIR 411
>UniRef50_A7AS46 Cluster: Clathrin coat adaptor subunit, putative;
n=1; Babesia bovis|Rep: Clathrin coat adaptor subunit,
putative - Babesia bovis
Length = 474
Score = 41.9 bits (94), Expect = 0.013
Identities = 21/84 (25%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDTKK 182
+ + IP P+N S V++I G+ + K +EN + W + ++ G + L ++ T
Sbjct: 359 VGMDIPLPINASHVEIISNAGQCQIKIAENMVHWHLGKVYGQTILSMEFHCRLTKSITGV 418
Query: 183 KWTRPPISMGFEVP-FAPSGFKVR 251
P+++ F++P ++ SG +R
Sbjct: 419 STHLSPLALHFDLPNYSFSGLYIR 442
>UniRef50_Q5CWB6 Cluster: Clathrin coat assembly protein AP50; n=2;
Cryptosporidium|Rep: Clathrin coat assembly protein AP50
- Cryptosporidium parvum Iowa II
Length = 548
Score = 37.5 bits (83), Expect = 0.27
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Frame = +3
Query: 15 IPTPLNTSGVQ----LICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXL-LETDTK 179
+P NT ++ LI ++ ++Y I+WKIK++ G E L ++I L ETD
Sbjct: 432 LPEKTNTVSLETIHPLIPVQQTSQYDDKNQRIIWKIKKIHGGTEIILKSKICLSFETDLN 491
Query: 180 K-KWTRPPISMGFEVP-FAPSGFKVRY 254
+ P+ + FE+P F S +V+Y
Sbjct: 492 SIRKKIGPLFLNFEIPMFNLSNIQVKY 518
>UniRef50_A2DPT4 Cluster: Adaptor complexes medium subunit family
protein; n=1; Trichomonas vaginalis G3|Rep: Adaptor
complexes medium subunit family protein - Trichomonas
vaginalis G3
Length = 428
Score = 37.1 bits (82), Expect = 0.36
Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Frame = +3
Query: 15 IPTPLNTSGVQLICL-KGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDTKKK-- 185
IP P NT+ V C K +AK+ +NA VW I G +Q+ L K
Sbjct: 312 IPLPQNTANVTFECAEKTRAKFDELKNAAVWTINDFVGQGHSQIVIIAQYLSASYKSSPA 371
Query: 186 -WTRPPISMGFEVP-FAPSGFKV 248
PIS F +P + SG +
Sbjct: 372 TKLNKPISAEFHIPKLSMSGLSI 394
>UniRef50_Q4RWQ3 Cluster: Chromosome 15 SCAF14981, whole genome
shotgun sequence; n=2; Euteleostomi|Rep: Chromosome 15
SCAF14981, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 128
Score = 36.7 bits (81), Expect = 0.48
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 123 GMKETQLSAEIXLLETDTKKKWTRPPISMGFEVP-FAPSGFKVRY 254
G KE + A L + + K +PPIS+ FE+P F SG +VRY
Sbjct: 4 GGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSGIQVRY 48
>UniRef50_Q4UEZ8 Cluster: Clathrin-coat assembly protein, putative;
n=2; Theileria|Rep: Clathrin-coat assembly protein,
putative - Theileria annulata
Length = 461
Score = 36.3 bits (80), Expect = 0.63
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLI--CLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDT 176
++ K+P +NT + + + ++YK N I W IK + G E L++EI
Sbjct: 363 LKCKLPNNVNTINMSVNPKFFQQVSEYKLENNTISWNIKNIQGSSEVVLNSEIVFNNKVN 422
Query: 177 KKKWTRPPISMGFEVP 224
++ PI++ FEVP
Sbjct: 423 SNQF--GPINLIFEVP 436
>UniRef50_Q0DG99 Cluster: Os05g0545200 protein; n=4; Oryza sativa|Rep:
Os05g0545200 protein - Oryza sativa subsp. japonica
(Rice)
Length = 1052
Score = 33.9 bits (74), Expect = 3.4
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = +3
Query: 333 STRPGAERRGDDWLRESQRVRIFEKYNKKTN 425
S R AE++ ++W RE+Q R+F+KYN TN
Sbjct: 1023 SKRRFAEQQAEEWWRENQE-RVFKKYNHPTN 1052
>UniRef50_A7QPG3 Cluster: Chromosome chr18 scaffold_137, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_137, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 395
Score = 33.9 bits (74), Expect = 3.4
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +2
Query: 128 EGDPAVCGDXAARDRHQEEVDAPAHLHGVRSSLCTLRIQGSLLKVFEPKLNYSDHDVIKW 307
+GD + DR Q P HLH S L L I ++ + EP +Y DV++
Sbjct: 99 KGDLPLLNSGLPEDRLQFTSFFPLHLHEQTSFLRGLDIVKGIILISEPDTSYMKQDVLER 158
Query: 308 VRYI 319
RY+
Sbjct: 159 FRYL 162
>UniRef50_Q7JP11 Cluster: Putative uncharacterized protein; n=4;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 557
Score = 33.5 bits (73), Expect = 4.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -2
Query: 462 IQHSYYIKLYLYGLFFCCIFRIFVLVAIHEANRRRVVQHLV 340
+ SY ++L++YG+ FC F+ + A R QHLV
Sbjct: 14 LSFSYTLELWMYGIAFCVGLPAFIFTVVRLARSRSSRQHLV 54
>UniRef50_A5K403 Cluster: Clathrin coat assembly protein AP50,
putative; n=1; Plasmodium vivax|Rep: Clathrin coat
assembly protein AP50, putative - Plasmodium vivax
Length = 763
Score = 33.5 bits (73), Expect = 4.4
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEI 155
I VKIP V +IC G Y N++VW I R+ + +LSAE+
Sbjct: 572 ISVKIPVYNFIRNVNIICTVGNIVYTEFYNSVVWCIPRVDN-SDIELSAEL 621
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 547,694,789
Number of Sequences: 1657284
Number of extensions: 9750542
Number of successful extensions: 28508
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 27728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28488
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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