Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1079
         (643 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.8  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   3.7  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   3.7  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   3.7  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   4.9  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   8.6  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 112 LIFHTIAFSEALYFA 68
           +IFH I F+  LYFA
Sbjct: 46  IIFHLILFAVLLYFA 60


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -2

Query: 450 YYIKLYLYGLFFCCIFRIFVL 388
           YY   Y   L FCC F IF +
Sbjct: 259 YYF--YYMHLLFCCAFIIFTM 277


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 465 YIQHSYYIKLYLYGLFFCCIFRIFVLVAI 379
           Y++H+YY +LY            F++VA+
Sbjct: 63  YVRHTYYRRLYTITHLVLDYLDEFLIVAL 91


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 465 YIQHSYYIKLYLYGLFFCCIFRIFVLVAI 379
           Y++H+YY +LY            F++VA+
Sbjct: 63  YVRHTYYRRLYTITHLVLDYLDEFLIVAL 91


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -2

Query: 84  RLYTSLSPSSKSVAPRWCSAELESS 10
           R +  LSP   S APR  S E +SS
Sbjct: 109 RPHPYLSPLFHSAAPRTASRETKSS 133


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +3

Query: 342 PGAERRGDDWLRESQRVRIFE 404
           P  + RG+ WL   Q++   E
Sbjct: 506 PKTDERGNPWLFRDQKIMFIE 526


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 357 RGDDWLRESQRVRIFEK 407
           RGD WL   + +++FE+
Sbjct: 380 RGDLWLSWEEGMKVFEE 396


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,853
Number of Sequences: 336
Number of extensions: 2404
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)