Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1079
(643 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U36188-1|AAA93254.1| 435|Homo sapiens assembly protein 50 protein. 157 4e-38
D63475-1|BAA09762.2| 438|Homo sapiens KIAA0109 protein. 157 4e-38
BT007308-1|AAP35972.1| 435|Homo sapiens adaptor-related protein... 157 4e-38
BC014030-1|AAH14030.1| 435|Homo sapiens adaptor-related protein... 157 4e-38
BC013796-1|AAH13796.1| 433|Homo sapiens adaptor-related protein... 157 4e-38
BC004996-1|AAH04996.1| 435|Homo sapiens adaptor-related protein... 157 4e-38
BC005021-1|AAH05021.1| 425|Homo sapiens adaptor-related protein... 60 5e-09
BC003612-1|AAH03612.1| 423|Homo sapiens adaptor-related protein... 60 5e-09
BC003387-1|AAH03387.1| 423|Homo sapiens adaptor-related protein... 60 5e-09
AK222946-1|BAD96666.1| 423|Homo sapiens adaptor-related protein... 60 5e-09
AF020797-1|AAD25870.2| 423|Homo sapiens AP-mu chain family memb... 60 5e-09
DQ059565-1|AAY54246.1| 435|Homo sapiens leukemia T cell specifi... 58 2e-08
BC017469-1|AAH17469.1| 423|Homo sapiens adaptor-related protein... 58 2e-08
AF290613-1|AAK28024.1| 423|Homo sapiens clathrin-associated pro... 58 2e-08
AB209808-1|BAD93045.1| 466|Homo sapiens adaptor-related protein... 58 2e-08
>U36188-1|AAA93254.1| 435|Homo sapiens assembly protein 50 protein.
Length = 435
Score = 157 bits (380), Expect = 4e-38
Identities = 72/84 (85%), Positives = 78/84 (92%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDTKK 182
IEV+IPTPLNTSGVQ+IC+KGKAKYKASENAIVWKIKRMAGMKE+Q+SAEI LL T+ KK
Sbjct: 320 IEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPTNDKK 379
Query: 183 KWTRPPISMGFEVPFAPSGFKVRY 254
KW RPPISM FEVPFAPSG KVRY
Sbjct: 380 KWARPPISMNFEVPFAPSGLKVRY 403
Score = 74.5 bits (175), Expect = 3e-13
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +2
Query: 254 LKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 349
LKVFEPKLNYSDHDVIKWVRYIGRSG+YETRC
Sbjct: 404 LKVFEPKLNYSDHDVIKWVRYIGRSGIYETRC 435
>D63475-1|BAA09762.2| 438|Homo sapiens KIAA0109 protein.
Length = 438
Score = 157 bits (380), Expect = 4e-38
Identities = 72/84 (85%), Positives = 78/84 (92%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDTKK 182
IEV+IPTPLNTSGVQ+IC+KGKAKYKASENAIVWKIKRMAGMKE+Q+SAEI LL T+ KK
Sbjct: 323 IEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPTNDKK 382
Query: 183 KWTRPPISMGFEVPFAPSGFKVRY 254
KW RPPISM FEVPFAPSG KVRY
Sbjct: 383 KWARPPISMNFEVPFAPSGLKVRY 406
Score = 74.5 bits (175), Expect = 3e-13
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +2
Query: 254 LKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 349
LKVFEPKLNYSDHDVIKWVRYIGRSG+YETRC
Sbjct: 407 LKVFEPKLNYSDHDVIKWVRYIGRSGIYETRC 438
>BT007308-1|AAP35972.1| 435|Homo sapiens adaptor-related protein
complex 2, mu 1 subunit protein.
Length = 435
Score = 157 bits (380), Expect = 4e-38
Identities = 72/84 (85%), Positives = 78/84 (92%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDTKK 182
IEV+IPTPLNTSGVQ+IC+KGKAKYKASENAIVWKIKRMAGMKE+Q+SAEI LL T+ KK
Sbjct: 320 IEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPTNDKK 379
Query: 183 KWTRPPISMGFEVPFAPSGFKVRY 254
KW RPPISM FEVPFAPSG KVRY
Sbjct: 380 KWARPPISMNFEVPFAPSGLKVRY 403
Score = 74.5 bits (175), Expect = 3e-13
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +2
Query: 254 LKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 349
LKVFEPKLNYSDHDVIKWVRYIGRSG+YETRC
Sbjct: 404 LKVFEPKLNYSDHDVIKWVRYIGRSGIYETRC 435
>BC014030-1|AAH14030.1| 435|Homo sapiens adaptor-related protein
complex 2, mu 1 subunit protein.
Length = 435
Score = 157 bits (380), Expect = 4e-38
Identities = 72/84 (85%), Positives = 78/84 (92%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDTKK 182
IEV+IPTPLNTSGVQ+IC+KGKAKYKASENAIVWKIKRMAGMKE+Q+SAEI LL T+ KK
Sbjct: 320 IEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPTNDKK 379
Query: 183 KWTRPPISMGFEVPFAPSGFKVRY 254
KW RPPISM FEVPFAPSG KVRY
Sbjct: 380 KWARPPISMNFEVPFAPSGLKVRY 403
Score = 74.5 bits (175), Expect = 3e-13
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +2
Query: 254 LKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 349
LKVFEPKLNYSDHDVIKWVRYIGRSG+YETRC
Sbjct: 404 LKVFEPKLNYSDHDVIKWVRYIGRSGIYETRC 435
>BC013796-1|AAH13796.1| 433|Homo sapiens adaptor-related protein
complex 2, mu 1 subunit protein.
Length = 433
Score = 157 bits (380), Expect = 4e-38
Identities = 72/84 (85%), Positives = 78/84 (92%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDTKK 182
IEV+IPTPLNTSGVQ+IC+KGKAKYKASENAIVWKIKRMAGMKE+Q+SAEI LL T+ KK
Sbjct: 318 IEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPTNDKK 377
Query: 183 KWTRPPISMGFEVPFAPSGFKVRY 254
KW RPPISM FEVPFAPSG KVRY
Sbjct: 378 KWARPPISMNFEVPFAPSGLKVRY 401
Score = 74.5 bits (175), Expect = 3e-13
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +2
Query: 254 LKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 349
LKVFEPKLNYSDHDVIKWVRYIGRSG+YETRC
Sbjct: 402 LKVFEPKLNYSDHDVIKWVRYIGRSGIYETRC 433
>BC004996-1|AAH04996.1| 435|Homo sapiens adaptor-related protein
complex 2, mu 1 subunit protein.
Length = 435
Score = 157 bits (380), Expect = 4e-38
Identities = 72/84 (85%), Positives = 78/84 (92%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDTKK 182
IEV+IPTPLNTSGVQ+IC+KGKAKYKASENAIVWKIKRMAGMKE+Q+SAEI LL T+ KK
Sbjct: 320 IEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPTNDKK 379
Query: 183 KWTRPPISMGFEVPFAPSGFKVRY 254
KW RPPISM FEVPFAPSG KVRY
Sbjct: 380 KWARPPISMNFEVPFAPSGLKVRY 403
Score = 74.5 bits (175), Expect = 3e-13
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +2
Query: 254 LKVFEPKLNYSDHDVIKWVRYIGRSGLYETRC 349
LKVFEPKLNYSDHDVIKWVRYIGRSG+YETRC
Sbjct: 404 LKVFEPKLNYSDHDVIKWVRYIGRSGIYETRC 435
>BC005021-1|AAH05021.1| 425|Homo sapiens adaptor-related protein
complex 1, mu 2 subunit protein.
Length = 425
Score = 60.5 bits (140), Expect = 5e-09
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDTKK 182
+E+ +P P + + G AKY N ++W IK G KE + A L + ++
Sbjct: 312 VEISVPVPSDADSPRFKTSVGSAKYVPERNVVIWSIKSFPGGKEYLMRAHFGLPRVEKEE 371
Query: 183 KWTRPPISMGFEVP-FAPSGFKVRY 254
RPPI + FE+P F SG +VRY
Sbjct: 372 VEGRPPIGVKFEIPYFTVSGIQVRY 396
>BC003612-1|AAH03612.1| 423|Homo sapiens adaptor-related protein
complex 1, mu 2 subunit protein.
Length = 423
Score = 60.5 bits (140), Expect = 5e-09
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDTKK 182
+E+ +P P + + G AKY N ++W IK G KE + A L + ++
Sbjct: 310 VEISVPVPSDADSPRFKTSVGSAKYVPERNVVIWSIKSFPGGKEYLMRAHFGLPSVEKEE 369
Query: 183 KWTRPPISMGFEVP-FAPSGFKVRY 254
RPPI + FE+P F SG +VRY
Sbjct: 370 VEGRPPIGVKFEIPYFTVSGIQVRY 394
>BC003387-1|AAH03387.1| 423|Homo sapiens adaptor-related protein
complex 1, mu 2 subunit protein.
Length = 423
Score = 60.5 bits (140), Expect = 5e-09
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDTKK 182
+E+ +P P + + G AKY N ++W IK G KE + A L + ++
Sbjct: 310 VEISVPVPSDADSPRFKTSVGSAKYVPERNVVIWSIKSFPGGKEYLMRAHFGLPSVEKEE 369
Query: 183 KWTRPPISMGFEVP-FAPSGFKVRY 254
RPPI + FE+P F SG +VRY
Sbjct: 370 VEGRPPIGVKFEIPYFTVSGIQVRY 394
>AK222946-1|BAD96666.1| 423|Homo sapiens adaptor-related protein
complex 1, mu 2 subunit variant protein.
Length = 423
Score = 60.5 bits (140), Expect = 5e-09
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDTKK 182
+E+ +P P + + G AKY N ++W IK G KE + A L + ++
Sbjct: 310 VEISVPVPSDADSPRFKTSVGSAKYVPERNVVIWSIKSFPGGKEYLMRAHFGLPSVEKEE 369
Query: 183 KWTRPPISMGFEVP-FAPSGFKVRY 254
RPPI + FE+P F SG +VRY
Sbjct: 370 VEGRPPIGVKFEIPYFTVSGIQVRY 394
>AF020797-1|AAD25870.2| 423|Homo sapiens AP-mu chain family member
mu1B protein.
Length = 423
Score = 60.5 bits (140), Expect = 5e-09
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDTKK 182
+E+ +P P + + G AKY N ++W IK G KE + A L + ++
Sbjct: 310 VEISVPVPSDADSPRFKTSVGSAKYVPERNVVIWSIKSFPGGKEYLMRAHFGLPSVEKEE 369
Query: 183 KWTRPPISMGFEVP-FAPSGFKVRY 254
RPPI + FE+P F SG +VRY
Sbjct: 370 VEGRPPIGVKFEIPYFTVSGIQVRY 394
>DQ059565-1|AAY54246.1| 435|Homo sapiens leukemia T cell specific
adaptor-related protein 1 mu1 subunit protein.
Length = 435
Score = 58.4 bits (135), Expect = 2e-08
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDTKK 182
+E+ IP P + + G K+ + IVW IK G KE + A L + +
Sbjct: 322 VEIHIPVPNDADSPKFKTTVGSVKWVPENSEIVWSIKSFPGGKEYLMRAHFGLPSVEAED 381
Query: 183 KWTRPPISMGFEVP-FAPSGFKVRY 254
K +PPIS+ FE+P F SG +VRY
Sbjct: 382 KEGKPPISVKFEIPYFTTSGIQVRY 406
>BC017469-1|AAH17469.1| 423|Homo sapiens adaptor-related protein
complex 1, mu 1 subunit protein.
Length = 423
Score = 58.4 bits (135), Expect = 2e-08
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDTKK 182
+E+ IP P + + G K+ + IVW IK G KE + A L + +
Sbjct: 310 VEIHIPVPNDADSPKFKTTVGSVKWVPENSEIVWSIKSFPGGKEYLMRAHFGLPSVEAED 369
Query: 183 KWTRPPISMGFEVP-FAPSGFKVRY 254
K +PPIS+ FE+P F SG +VRY
Sbjct: 370 KEGKPPISVKFEIPYFTTSGIQVRY 394
>AF290613-1|AAK28024.1| 423|Homo sapiens clathrin-associated
protein AP47 protein.
Length = 423
Score = 58.4 bits (135), Expect = 2e-08
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDTKK 182
+E+ IP P + + G K+ + IVW IK G KE + A L + +
Sbjct: 310 VEIHIPVPNDADSPKFKTTVGSVKWVPENSEIVWSIKSFPGGKEYLMRAHFGLPSVEAED 369
Query: 183 KWTRPPISMGFEVP-FAPSGFKVRY 254
K +PPIS+ FE+P F SG +VRY
Sbjct: 370 KEGKPPISVKFEIPYFTTSGIQVRY 394
>AB209808-1|BAD93045.1| 466|Homo sapiens adaptor-related protein
complex 1, mu 1 subunit variant protein.
Length = 466
Score = 58.4 bits (135), Expect = 2e-08
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 IEVKIPTPLNTSGVQLICLKGKAKYKASENAIVWKIKRMAGMKETQLSAEIXLLETDTKK 182
+E+ IP P + + G K+ + IVW IK G KE + A L + +
Sbjct: 353 VEIHIPVPNDADSPKFKTTVGSVKWVPENSEIVWSIKSFPGGKEYLMRAHFGLPSVEAED 412
Query: 183 KWTRPPISMGFEVP-FAPSGFKVRY 254
K +PPIS+ FE+P F SG +VRY
Sbjct: 413 KEGKPPISVKFEIPYFTTSGIQVRY 437
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,924,758
Number of Sequences: 237096
Number of extensions: 1494790
Number of successful extensions: 2990
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2990
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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