Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1078
         (624 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    27   0.64 
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   6.0  
AY752910-1|AAV30084.1|  250|Anopheles gambiae peroxidase 15 prot...    23   7.9  

>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 13/48 (27%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
 Frame = +3

Query: 384 VKSIIRTKVYKSLKSNKSRKIFIQLRD*R-LVNVDI*IVFYLAVSSLF 524
           +KS++  K ++  ++N+SR+  ++L   R LVN+ + ++  LA  +++
Sbjct: 120 IKSLLYQKRFEHERNNRSREFMLKLIAIRMLVNLVVFVILLLAAITIY 167


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -3

Query: 592 SVIQTCLLASPVPVCIL 542
           S +  C++AS VP+C++
Sbjct: 801 SHVAVCVIASMVPICLI 817


>AY752910-1|AAV30084.1|  250|Anopheles gambiae peroxidase 15
           protein.
          Length = 250

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 197 PFWCELTLFVPSRRFWVHFRLYMKFNIFI 283
           P W + TLF  SRR  +    ++ +N F+
Sbjct: 67  PHWDDETLFQESRRINIAIIQHITYNEFL 95


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 601,857
Number of Sequences: 2352
Number of extensions: 11861
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 60632475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)