Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1078
(624 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein... 23 1.8
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 23 2.4
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 9.8
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 9.8
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 9.8
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 9.8
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 9.8
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 9.8
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 9.8
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 9.8
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 9.8
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 9.8
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 9.8
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 21 9.8
AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein. 21 9.8
>AY661557-1|AAT74557.1| 411|Apis mellifera yellow-f-like protein
protein.
Length = 411
Score = 23.4 bits (48), Expect = 1.8
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -3
Query: 67 LYSKHDLKKRITFIT 23
L+SK+D KKR FIT
Sbjct: 371 LFSKYDAKKRNFFIT 385
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 23.0 bits (47), Expect = 2.4
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +1
Query: 424 NRIRVGKYLYNSGTED*LMLIYKLYFIW 507
+++ VG+Y Y +GTE + + + W
Sbjct: 370 DQVSVGRYFYPNGTEKMTLSVNESNITW 397
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -3
Query: 82 NNEYGLYSKHDLKK 41
NN Y Y+KH+ K
Sbjct: 95 NNNYNNYNKHNYNK 108
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -3
Query: 82 NNEYGLYSKHDLKK 41
NN Y Y+KH+ K
Sbjct: 95 NNNYNNYNKHNYNK 108
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -3
Query: 82 NNEYGLYSKHDLKK 41
NN Y Y+KH+ K
Sbjct: 95 NNNYNNYNKHNYNK 108
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -3
Query: 82 NNEYGLYSKHDLKK 41
NN Y Y+KH+ K
Sbjct: 95 NNNYNNYNKHNYNK 108
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -3
Query: 82 NNEYGLYSKHDLKK 41
NN Y Y+KH+ K
Sbjct: 95 NNNYNNYNKHNYNK 108
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -3
Query: 82 NNEYGLYSKHDLKK 41
NN Y Y+KH+ K
Sbjct: 95 NNNYNNYNKHNYNK 108
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -3
Query: 82 NNEYGLYSKHDLKK 41
NN Y Y+KH+ K
Sbjct: 95 NNNYNNYNKHNYNK 108
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -3
Query: 82 NNEYGLYSKHDLKK 41
NN Y Y+KH+ K
Sbjct: 95 NNNYNNYNKHNYNK 108
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -3
Query: 82 NNEYGLYSKHDLKK 41
NN Y Y+KH+ K
Sbjct: 95 NNNYNNYNKHNYNK 108
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -3
Query: 82 NNEYGLYSKHDLKK 41
NN Y Y+KH+ K
Sbjct: 328 NNNYNNYNKHNYNK 341
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -3
Query: 82 NNEYGLYSKHDLKK 41
NN Y Y+KH+ K
Sbjct: 328 NNNYNNYNKHNYNK 341
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 58 LNINRIRYLGGRYIPLEKSL 117
L IN ++YLGG++ + K +
Sbjct: 102 LLINVVKYLGGKHKFISKKI 121
>AB072429-1|BAB83990.1| 388|Apis mellifera IP3phosphatase protein.
Length = 388
Score = 21.0 bits (42), Expect = 9.8
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = +2
Query: 185 EIRTPFWCELTLFVPSRRFWV 247
+ R P WC+ L P+ + V
Sbjct: 334 QTRVPAWCDRVLLNPTDKMLV 354
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,976
Number of Sequences: 438
Number of extensions: 3453
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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