SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1077
         (637 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B4335 Cluster: PREDICTED: similar to eukaryotic...    96   5e-19
UniRef50_Q9W4X7 Cluster: CG8636-PA; n=8; Endopterygota|Rep: CG86...    84   2e-15
UniRef50_A7T5A6 Cluster: Predicted protein; n=1; Nematostella ve...    81   2e-14
UniRef50_Q9VDM6 Cluster: CG10881-PA; n=2; Sophophora|Rep: CG1088...    75   1e-12
UniRef50_O75821 Cluster: Eukaryotic translation initiation facto...    71   2e-11
UniRef50_Q5DF32 Cluster: SJCHGC06618 protein; n=2; Schistosoma j...    54   2e-06
UniRef50_Q4P7G1 Cluster: Putative uncharacterized protein; n=1; ...    54   4e-06
UniRef50_Q6BT10 Cluster: Debaryomyces hansenii chromosome D of s...    49   8e-05
UniRef50_A7TJ86 Cluster: Putative uncharacterized protein; n=1; ...    47   4e-04
UniRef50_Q6C747 Cluster: Yarrowia lipolytica chromosome E of str...    46   0.001
UniRef50_Q19706 Cluster: Probable eukaryotic translation initiat...    46   0.001
UniRef50_P78795 Cluster: Probable eukaryotic translation initiat...    45   0.002
UniRef50_Q016G8 Cluster: Initiation factor 3g; n=2; Ostreococcus...    43   0.007
UniRef50_Q9FI86 Cluster: Eukaryotic translation initiation facto...    42   0.009
UniRef50_Q5K9M4 Cluster: Eukaryotic translation initiation facto...    42   0.016
UniRef50_A7PNS9 Cluster: Chromosome chr8 scaffold_23, whole geno...    40   0.050
UniRef50_Q04067 Cluster: Eukaryotic translation initiation facto...    38   0.15 
UniRef50_Q5GAI2 Cluster: Deoxyribonucleoside kinase/thymidine ki...    35   1.4  
UniRef50_Q97IB5 Cluster: Predicted kinase related to hydroxyacet...    33   4.4  
UniRef50_Q0HEX3 Cluster: DEAD/DEAH box helicase domain protein; ...    33   5.8  

>UniRef50_UPI00015B4335 Cluster: PREDICTED: similar to eukaryotic
           translation initiation factor 3 subunit 4; n=1; Nasonia
           vitripennis|Rep: PREDICTED: similar to eukaryotic
           translation initiation factor 3 subunit 4 - Nasonia
           vitripennis
          Length = 293

 Score = 96.3 bits (229), Expect = 5e-19
 Identities = 44/74 (59%), Positives = 52/74 (70%)
 Frame = +3

Query: 255 KRVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGL 434
           KR VSKSIA RK W+KFGDS +D PGPNPATT +AEDVFMQF++ KEE  + ++  LD L
Sbjct: 60  KRTVSKSIAVRKNWAKFGDSTNDGPGPNPATTVIAEDVFMQFLSGKEEDNKVEEDALDKL 119

Query: 435 KPPSSNVIFKCRTC 476
           K        KCR C
Sbjct: 120 KSLVEKGAVKCRNC 133



 Score = 72.1 bits (169), Expect = 1e-11
 Identities = 34/54 (62%), Positives = 42/54 (77%), Gaps = 2/54 (3%)
 Frame = +1

Query: 100 EFQASWADEVEIDQG--VLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIE 255
           E  +SWADEVE D+G   LPPPS + EN  KI+TEYK + DNKKVK+VRTY++E
Sbjct: 7   EVSSSWADEVE-DEGNITLPPPSIIYENDFKIMTEYKLNEDNKKVKVVRTYRVE 59


>UniRef50_Q9W4X7 Cluster: CG8636-PA; n=8; Endopterygota|Rep:
           CG8636-PA - Drosophila melanogaster (Fruit fly)
          Length = 269

 Score = 84.2 bits (199), Expect = 2e-15
 Identities = 37/56 (66%), Positives = 44/56 (78%)
 Frame = +1

Query: 85  MPVAEEFQASWADEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKI 252
           MP  E  ++SWADEVE+D G LPP +E VENG K VTEYKY+ D+KK K+VRTYKI
Sbjct: 1   MPGVETIKSSWADEVELDYGGLPPTTETVENGQKYVTEYKYNKDDKKTKVVRTYKI 56



 Score = 81.8 bits (193), Expect = 1e-14
 Identities = 40/74 (54%), Positives = 55/74 (74%)
 Frame = +3

Query: 255 KRVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGL 434
           K+VV K++AKR+TW+KFGDS +DKPGPN  TT V+E++ MQF+ SKE+ ++ +D  LD  
Sbjct: 58  KQVVPKTVAKRRTWTKFGDSKNDKPGPNSQTTMVSEEIIMQFLNSKED-EKANDPLLD-- 114

Query: 435 KPPSSNVIFKCRTC 476
             P+ N I KCR C
Sbjct: 115 --PTKN-IAKCRIC 125


>UniRef50_A7T5A6 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 168

 Score = 81.0 bits (191), Expect = 2e-14
 Identities = 41/74 (55%), Positives = 50/74 (67%)
 Frame = +3

Query: 258 RVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLK 437
           R V+K IAKRK W KFGDS +DKPGPN  TTNV +DVF+  +TS +E+  PD  E D LK
Sbjct: 36  RRVAKEIAKRKLWKKFGDSKNDKPGPNKTTTNVCDDVFL-ILTSNKEN--PDATEEDPLK 92

Query: 438 PPSSNVIFKCRTCQ 479
             S   I +CR C+
Sbjct: 93  KLSGQKIVQCRICK 106


>UniRef50_Q9VDM6 Cluster: CG10881-PA; n=2; Sophophora|Rep:
           CG10881-PA - Drosophila melanogaster (Fruit fly)
          Length = 273

 Score = 75.4 bits (177), Expect = 1e-12
 Identities = 38/74 (51%), Positives = 50/74 (67%)
 Frame = +3

Query: 255 KRVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGL 434
           K++V K++A+R+ W KFGDS SDKPGPN  TT  +E++FMQFI SK+  Q   + +LD  
Sbjct: 56  KQIVPKAVARRRNWVKFGDSRSDKPGPNSQTTMASEEIFMQFIGSKDFDQ-THETQLD-- 112

Query: 435 KPPSSNVIFKCRTC 476
             P  N I KCR C
Sbjct: 113 --PGKN-IAKCRIC 123



 Score = 64.1 bits (149), Expect = 3e-09
 Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
 Frame = +1

Query: 103 FQASWADEVEIDQ-GVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIENVLFQRVL 279
           F  SWADEV+ D    LPP +E ++   K VTEYK+++D KKVK+VRT+KIE  +  + +
Sbjct: 4   FVTSWADEVDADYVDGLPPSNEYIKGDFKYVTEYKFNDDGKKVKVVRTFKIEKQIVPKAV 63


>UniRef50_O75821 Cluster: Eukaryotic translation initiation factor 3
           subunit 4; n=36; Eumetazoa|Rep: Eukaryotic translation
           initiation factor 3 subunit 4 - Homo sapiens (Human)
          Length = 320

 Score = 70.9 bits (166), Expect = 2e-11
 Identities = 35/74 (47%), Positives = 45/74 (60%)
 Frame = +3

Query: 258 RVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLK 437
           R  SK++A+RK W KFG+S  D PGPN ATT V++DV M FITSKE+    +  E D + 
Sbjct: 90  RKASKAVARRKNWKKFGNSEFDPPGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMN 147

Query: 438 PPSSNVIFKCRTCQ 479
                 I  CR C+
Sbjct: 148 KLKGQKIVSCRICK 161



 Score = 54.8 bits (126), Expect = 2e-06
 Identities = 23/36 (63%), Positives = 27/36 (75%)
 Frame = +1

Query: 148 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIE 255
           LPPP EV+   +K VTEYK D D KK KIVRT++IE
Sbjct: 53  LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIE 88


>UniRef50_Q5DF32 Cluster: SJCHGC06618 protein; n=2; Schistosoma
           japonicum|Rep: SJCHGC06618 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 281

 Score = 54.4 bits (125), Expect = 2e-06
 Identities = 29/81 (35%), Positives = 40/81 (49%)
 Frame = +3

Query: 237 QDIQN*KRVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDD 416
           ++ Q  KRVV+  +A RK W KFG S SD PG N A T  A+ V MQ + +++  Q    
Sbjct: 47  KEYQKEKRVVASRVADRKKWRKFGASKSDPPGGNLANTYPADIVTMQIVQARQPEQEQKR 106

Query: 417 GELDGLKPPSSNVIFKCRTCQ 479
            E    K      +  C  C+
Sbjct: 107 QEEVNAKVKLGEPVVACSYCK 127


>UniRef50_Q4P7G1 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 308

 Score = 53.6 bits (123), Expect = 4e-06
 Identities = 23/75 (30%), Positives = 44/75 (58%)
 Frame = +3

Query: 255 KRVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGL 434
           K  V+  +A+RKTW+KFG       GP+ ATT + E+V ++ +++  ++  P+  ++D +
Sbjct: 71  KTKVNHEVAERKTWTKFGQEKGKAAGPHSATTTIGENVVLK-MSAGNKTAEPEVDDMDKM 129

Query: 435 KPPSSNVIFKCRTCQ 479
           +   +N    CR C+
Sbjct: 130 RQQLANKRIVCRLCK 144



 Score = 36.3 bits (80), Expect = 0.62
 Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = +1

Query: 112 SWADEV-EIDQGVLPPPSEVVE-NGLKIVTEYKYDNDNKKVKIVRTYK 249
           +WADE  E   G  P   E  E NG+K+V EY+ + D KK+KI R  K
Sbjct: 19  NWADEFDEPVVGDAPRIEERDEGNGVKVVIEYRTNPDGKKIKITRRVK 66


>UniRef50_Q6BT10 Cluster: Debaryomyces hansenii chromosome D of
           strain CBS767 of Debaryomyces hansenii; n=6;
           Saccharomycetales|Rep: Debaryomyces hansenii chromosome
           D of strain CBS767 of Debaryomyces hansenii -
           Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
          Length = 276

 Score = 49.2 bits (112), Expect = 8e-05
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
 Frame = +3

Query: 255 KRVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGL 434
           K  V   IA+RK W+K+G   +  PGP+  TT + E V ++  TS +E ++ ++   +  
Sbjct: 55  KEKVHPLIAQRKNWAKYGKEKNTPPGPDTRTTQLGEKVELKLGTSWKEIEKQEEESKEEQ 114

Query: 435 KPP-SSNVIFKCRTC 476
           K    S    KCRTC
Sbjct: 115 KAQLVSTQRIKCRTC 129


>UniRef50_A7TJ86 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 131

 Score = 46.8 bits (106), Expect = 4e-04
 Identities = 30/86 (34%), Positives = 44/86 (51%)
 Frame = +3

Query: 225 SENCQDIQN*KRVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQ 404
           S+N ++I   +RV    +  RK W+K+G  A+  PGP   TTN  E+V   FI SK   +
Sbjct: 33  SQNFKEINVLERV-DPVVDARKKWAKYGAEANSPPGPGYDTTNPGENV--TFILSKNWRE 89

Query: 405 RPDDGELDGLKPPSSNVIFKCRTCQE 482
             +  E + LK  +  V   CR C +
Sbjct: 90  LTEIEEANRLK-KNPKVYISCRACSQ 114


>UniRef50_Q6C747 Cluster: Yarrowia lipolytica chromosome E of strain
           CLIB 122 of Yarrowia lipolytica; n=1; Yarrowia
           lipolytica|Rep: Yarrowia lipolytica chromosome E of
           strain CLIB 122 of Yarrowia lipolytica - Yarrowia
           lipolytica (Candida lipolytica)
          Length = 294

 Score = 45.6 bits (103), Expect = 0.001
 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
 Frame = +3

Query: 264 VSKSIAKRKTWSKFGDSASDKPGPNPATTNVAED-VFMQFITSKEESQRPDDGELDGLKP 440
           V   +A+R  W+K+G      PGPN  TT + ED VF+  + S +  +  ++ E     P
Sbjct: 70  VLNCVAERSKWTKYGKELGAPPGPNRMTTTIGEDIVFVLGLKSDQPEEEVEEEEAAAAAP 129

Query: 441 -PSSNVIFKCRTCQ 479
               +   KCR CQ
Sbjct: 130 RVGEDKGVKCRLCQ 143


>UniRef50_Q19706 Cluster: Probable eukaryotic translation initiation
           factor 3 subunit 4; n=2; Caenorhabditis|Rep: Probable
           eukaryotic translation initiation factor 3 subunit 4 -
           Caenorhabditis elegans
          Length = 256

 Score = 45.6 bits (103), Expect = 0.001
 Identities = 22/47 (46%), Positives = 27/47 (57%)
 Frame = +3

Query: 264 VSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQ 404
           V K +A RK W KFG    +  GP  ATT VAE+V MQF  ++   Q
Sbjct: 56  VPKVVADRKKWVKFGSCKGEPAGPQVATTYVAEEVDMQFTRNRAGEQ 102


>UniRef50_P78795 Cluster: Probable eukaryotic translation initiation
           factor 3 RNA-binding subunit; n=1; Schizosaccharomyces
           pombe|Rep: Probable eukaryotic translation initiation
           factor 3 RNA-binding subunit - Schizosaccharomyces pombe
           (Fission yeast)
          Length = 282

 Score = 44.8 bits (101), Expect = 0.002
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
 Frame = +3

Query: 264 VSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQ----FITSKEESQRPDDGELDG 431
           V  ++A+RK W KFG  A    G +  TT+V E+V ++    + T+KEE Q  D+  L  
Sbjct: 61  VQHAVAERKKWKKFGKEAGKNSGVDARTTSVGENVQLRLQLGWTTTKEEEQ--DEAALAA 118

Query: 432 LK-PPSSNVIFKCRTCQ 479
            K     + + +CR C+
Sbjct: 119 AKVKAKGSSVVRCRACK 135



 Score = 33.5 bits (73), Expect = 4.4
 Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
 Frame = +1

Query: 115 WADEVEIDQGVLPPPSEVVEN--GLKIVTEYKYDNDNKKVKIVRTYKIENVLFQRV 276
           WAD+ +   G+  P  +  +N  G K + E++ D++ KKVK+ R  + + V+ +RV
Sbjct: 9   WADDEDYGTGL--PSIQTFDNPDGTKTMIEFRIDDNGKKVKVTRVIR-KTVITERV 61


>UniRef50_Q016G8 Cluster: Initiation factor 3g; n=2;
           Ostreococcus|Rep: Initiation factor 3g - Ostreococcus
           tauri
          Length = 311

 Score = 42.7 bits (96), Expect = 0.007
 Identities = 20/71 (28%), Positives = 34/71 (47%)
 Frame = +3

Query: 264 VSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPP 443
           V+  + +RKTW KFGD+   KPG    T    E++F++    + +S+     +       
Sbjct: 97  VTPGMLERKTWEKFGDAKRYKPGDESMTAVSLEEIFLEKTRVQPKSELEKASDPLAAMAS 156

Query: 444 SSNVIFKCRTC 476
           +   +  CRTC
Sbjct: 157 AQTSLLVCRTC 167


>UniRef50_Q9FI86 Cluster: Eukaryotic translation initiation factor 3
           subunit-like protein; n=12; Magnoliophyta|Rep:
           Eukaryotic translation initiation factor 3 subunit-like
           protein - Arabidopsis thaliana (Mouse-ear cress)
          Length = 308

 Score = 42.3 bits (95), Expect = 0.009
 Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
 Frame = +1

Query: 121 DEVEIDQGVLPPPSEVV---ENGLKIVTEYKYDNDNKKVKIVRTYKIE 255
           DE E D   L PP +++   +NG+K V EYK++ ++KKVKI  T +++
Sbjct: 18  DEEEGDYDFLLPPKQMISPDQNGVKKVIEYKFNEEDKKVKITTTTRVQ 65



 Score = 40.3 bits (90), Expect = 0.038
 Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
 Frame = +3

Query: 255 KRVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFIT---SKEESQRPDDGEL 425
           KR ++K   +R++W+KFGD+A ++   +  T    ED+ ++ I    S  E        +
Sbjct: 66  KRALTKQAVERRSWNKFGDAAHEE-SSSYLTMRSTEDIILERIRAPGSNAEQSTVSGDSM 124

Query: 426 DGLKPPSSNVIFKCRTCQE 482
             L  P + V+  CR CQ+
Sbjct: 125 SQLGKPGA-VLMVCRLCQK 142


>UniRef50_Q5K9M4 Cluster: Eukaryotic translation initiation factor
           3, subunit 4 delta, 44kDa, putative; n=1; Filobasidiella
           neoformans|Rep: Eukaryotic translation initiation factor
           3, subunit 4 delta, 44kDa, putative - Cryptococcus
           neoformans (Filobasidiella neoformans)
          Length = 290

 Score = 41.5 bits (93), Expect = 0.016
 Identities = 22/71 (30%), Positives = 37/71 (52%)
 Frame = +3

Query: 264 VSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPP 443
           V++++A+RK W KFG      PGP+  TT + E++  + I    + QR +      +K P
Sbjct: 63  VTQTMAERKQWPKFGLDKGKPPGPDRKTTIIGENLHFK-IAPISKIQRVEPEPETAVKAP 121

Query: 444 SSNVIFKCRTC 476
           +   +  CR C
Sbjct: 122 TGKAVV-CRLC 131



 Score = 37.9 bits (84), Expect = 0.20
 Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
 Frame = +1

Query: 85  MPVAEEFQASWA-DEVEIDQGVLPPPSEVVE-NGLKIVTEYKYDNDNKKVKIVR 240
           M  +++    WA D+V+ D+  LPP +E  + NG+  +  +KY+ D++KVK+ R
Sbjct: 1   MADSKQSNRDWAADDVDADE--LPPTTESTDANGITTIVSWKYNADDQKVKVTR 52


>UniRef50_A7PNS9 Cluster: Chromosome chr8 scaffold_23, whole genome
           shotgun sequence; n=4; Magnoliophyta|Rep: Chromosome
           chr8 scaffold_23, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 293

 Score = 39.9 bits (89), Expect = 0.050
 Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
 Frame = +1

Query: 121 DEVEIDQGVLPPPSEVV--ENGLKIVTEYKYDNDNKKVKIVRTYKIENVLFQRV 276
           D+ E    +LPPP  +   +NG+K V EYK+++D  KVKI  T ++  +   R+
Sbjct: 20  DDTEDLDFLLPPPQVIGPDDNGIKKVIEYKFNDDGDKVKITTTTRVRKLANARL 73


>UniRef50_Q04067 Cluster: Eukaryotic translation initiation factor 3
           RNA-binding subunit; n=6; Saccharomycetales|Rep:
           Eukaryotic translation initiation factor 3 RNA-binding
           subunit - Saccharomyces cerevisiae (Baker's yeast)
          Length = 274

 Score = 38.3 bits (85), Expect = 0.15
 Identities = 18/71 (25%), Positives = 35/71 (49%)
 Frame = +3

Query: 264 VSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLKPP 443
           V KS+A+RK W K+G       GP+  T  + E+V ++   + +++   ++  +   K  
Sbjct: 45  VHKSVAERKNWHKYGSEKGSPAGPSAVTARLGEEVELRLSRNWKQA---EEERIQKEKAS 101

Query: 444 SSNVIFKCRTC 476
            +    +CR C
Sbjct: 102 LTKTGLQCRLC 112


>UniRef50_Q5GAI2 Cluster: Deoxyribonucleoside kinase/thymidine
           kinase; n=2; Singapore grouper iridovirus|Rep:
           Deoxyribonucleoside kinase/thymidine kinase - Grouper
           iridovirus
          Length = 191

 Score = 35.1 bits (77), Expect = 1.4
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
 Frame = +1

Query: 46  CKIAIGV*NICFDMPVAEEF----QASWADEVEIDQGVLPPPSEVVENGLKIVTEY 201
           C++ IG  +  F+  ++ E+     A + D  ++    LPP  EVVEN +K++ +Y
Sbjct: 134 CRVRIGNRDREFEQAISNEYLTALHAQFIDAADVKLSGLPPKEEVVENFIKLLAQY 189


>UniRef50_Q97IB5 Cluster: Predicted kinase related to hydroxyacetone
           kinase, YLOV ortholog; n=6; Clostridium|Rep: Predicted
           kinase related to hydroxyacetone kinase, YLOV ortholog -
           Clostridium acetobutylicum
          Length = 547

 Score = 33.5 bits (73), Expect = 4.4
 Identities = 18/51 (35%), Positives = 30/51 (58%)
 Frame = +1

Query: 109 ASWADEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIENV 261
           A+ A E+  D+ V+  P++ +  G+  +TE++YD D +K K   T  IE V
Sbjct: 394 ANQASELS-DKNVVVIPTKTIPQGITCMTEFEYDGDVEKNKEKLTKAIEKV 443


>UniRef50_Q0HEX3 Cluster: DEAD/DEAH box helicase domain protein;
           n=1; Shewanella sp. MR-4|Rep: DEAD/DEAH box helicase
           domain protein - Shewanella sp. (strain MR-4)
          Length = 717

 Score = 33.1 bits (72), Expect = 5.8
 Identities = 19/70 (27%), Positives = 33/70 (47%)
 Frame = +1

Query: 91  VAEEFQASWADEVEIDQGVLPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIENVLFQ 270
           +   F  ++   +EI +      +EV+ +G K +TE  Y N N+ +KI    K +  L  
Sbjct: 484 ILNTFSKTYNIPIEIIKKHQSYKAEVIADGYKFLTELSYHNKNELIKIKTPKKHQLELLT 543

Query: 271 RVLPNVKLGA 300
             +  V+ GA
Sbjct: 544 EFIKKVEYGA 553


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 575,288,462
Number of Sequences: 1657284
Number of extensions: 10185006
Number of successful extensions: 32177
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 30892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32161
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47296372782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -