BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--1077 (637 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U96074-1|AAC78728.1| 320|Homo sapiens translation initiation fa... 71 3e-12 CR457134-1|CAG33415.1| 320|Homo sapiens EIF3S4 protein. 71 3e-12 BT006889-1|AAP35535.1| 320|Homo sapiens eukaryotic translation ... 71 3e-12 BC008469-1|AAH08469.1| 320|Homo sapiens eukaryotic translation ... 71 3e-12 BC000733-1|AAH00733.1| 320|Homo sapiens eukaryotic translation ... 71 3e-12 AF094850-1|AAG15419.1| 320|Homo sapiens eukaryotic translation ... 71 3e-12 AF092453-1|AAG15396.1| 320|Homo sapiens eukaryotic translation ... 71 3e-12 AF020833-1|AAB71866.1| 320|Homo sapiens eukaryotic translation ... 71 3e-12 >U96074-1|AAC78728.1| 320|Homo sapiens translation initiation factor eIF3 p44 subunit protein. Length = 320 Score = 70.9 bits (166), Expect = 3e-12 Identities = 35/74 (47%), Positives = 45/74 (60%) Frame = +3 Query: 258 RVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLK 437 R SK++A+RK W KFG+S D PGPN ATT V++DV M FITSKE+ + E D + Sbjct: 90 RKASKAVARRKNWKKFGNSEFDPPGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMN 147 Query: 438 PPSSNVIFKCRTCQ 479 I CR C+ Sbjct: 148 KLKGQKIVSCRICK 161 Score = 54.8 bits (126), Expect = 2e-07 Identities = 23/36 (63%), Positives = 27/36 (75%) Frame = +1 Query: 148 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIE 255 LPPP EV+ +K VTEYK D D KK KIVRT++IE Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIE 88 >CR457134-1|CAG33415.1| 320|Homo sapiens EIF3S4 protein. Length = 320 Score = 70.9 bits (166), Expect = 3e-12 Identities = 35/74 (47%), Positives = 45/74 (60%) Frame = +3 Query: 258 RVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLK 437 R SK++A+RK W KFG+S D PGPN ATT V++DV M FITSKE+ + E D + Sbjct: 90 RKASKAVARRKNWKKFGNSEFDPPGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMN 147 Query: 438 PPSSNVIFKCRTCQ 479 I CR C+ Sbjct: 148 KLKGQKIVSCRICK 161 Score = 54.8 bits (126), Expect = 2e-07 Identities = 23/36 (63%), Positives = 27/36 (75%) Frame = +1 Query: 148 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIE 255 LPPP EV+ +K VTEYK D D KK KIVRT++IE Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIE 88 >BT006889-1|AAP35535.1| 320|Homo sapiens eukaryotic translation initiation factor 3, subunit 4 delta, 44kDa protein. Length = 320 Score = 70.9 bits (166), Expect = 3e-12 Identities = 35/74 (47%), Positives = 45/74 (60%) Frame = +3 Query: 258 RVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLK 437 R SK++A+RK W KFG+S D PGPN ATT V++DV M FITSKE+ + E D + Sbjct: 90 RKASKAVARRKNWKKFGNSEFDPPGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMN 147 Query: 438 PPSSNVIFKCRTCQ 479 I CR C+ Sbjct: 148 KLKGQKIVSCRICK 161 Score = 54.8 bits (126), Expect = 2e-07 Identities = 23/36 (63%), Positives = 27/36 (75%) Frame = +1 Query: 148 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIE 255 LPPP EV+ +K VTEYK D D KK KIVRT++IE Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIE 88 >BC008469-1|AAH08469.1| 320|Homo sapiens eukaryotic translation initiation factor 3, subunit 4 delta, 44kDa protein. Length = 320 Score = 70.9 bits (166), Expect = 3e-12 Identities = 35/74 (47%), Positives = 45/74 (60%) Frame = +3 Query: 258 RVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLK 437 R SK++A+RK W KFG+S D PGPN ATT V++DV M FITSKE+ + E D + Sbjct: 90 RKASKAVARRKNWKKFGNSEFDPPGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMN 147 Query: 438 PPSSNVIFKCRTCQ 479 I CR C+ Sbjct: 148 KLKGQKIVSCRICK 161 Score = 54.8 bits (126), Expect = 2e-07 Identities = 23/36 (63%), Positives = 27/36 (75%) Frame = +1 Query: 148 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIE 255 LPPP EV+ +K VTEYK D D KK KIVRT++IE Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIE 88 >BC000733-1|AAH00733.1| 320|Homo sapiens eukaryotic translation initiation factor 3, subunit 4 delta, 44kDa protein. Length = 320 Score = 70.9 bits (166), Expect = 3e-12 Identities = 35/74 (47%), Positives = 45/74 (60%) Frame = +3 Query: 258 RVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLK 437 R SK++A+RK W KFG+S D PGPN ATT V++DV M FITSKE+ + E D + Sbjct: 90 RKASKAVARRKNWKKFGNSEFDPPGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMN 147 Query: 438 PPSSNVIFKCRTCQ 479 I CR C+ Sbjct: 148 KLKGQKIVSCRICK 161 Score = 54.8 bits (126), Expect = 2e-07 Identities = 23/36 (63%), Positives = 27/36 (75%) Frame = +1 Query: 148 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIE 255 LPPP EV+ +K VTEYK D D KK KIVRT++IE Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIE 88 >AF094850-1|AAG15419.1| 320|Homo sapiens eukaryotic translation initiation factor 3 subunit p42/p44 protein. Length = 320 Score = 70.9 bits (166), Expect = 3e-12 Identities = 35/74 (47%), Positives = 45/74 (60%) Frame = +3 Query: 258 RVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLK 437 R SK++A+RK W KFG+S D PGPN ATT V++DV M FITSKE+ + E D + Sbjct: 90 RKASKAVARRKNWKKFGNSEFDPPGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMN 147 Query: 438 PPSSNVIFKCRTCQ 479 I CR C+ Sbjct: 148 KLKGQKIVSCRICK 161 Score = 54.8 bits (126), Expect = 2e-07 Identities = 23/36 (63%), Positives = 27/36 (75%) Frame = +1 Query: 148 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIE 255 LPPP EV+ +K VTEYK D D KK KIVRT++IE Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIE 88 >AF092453-1|AAG15396.1| 320|Homo sapiens eukaryotic translation initiation factor 3 subunit p42/p44 protein. Length = 320 Score = 70.9 bits (166), Expect = 3e-12 Identities = 35/74 (47%), Positives = 45/74 (60%) Frame = +3 Query: 258 RVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLK 437 R SK++A+RK W KFG+S D PGPN ATT V++DV M FITSKE+ + E D + Sbjct: 90 RKASKAVARRKNWKKFGNSEFDPPGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMN 147 Query: 438 PPSSNVIFKCRTCQ 479 I CR C+ Sbjct: 148 KLKGQKIVSCRICK 161 Score = 54.8 bits (126), Expect = 2e-07 Identities = 23/36 (63%), Positives = 27/36 (75%) Frame = +1 Query: 148 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIE 255 LPPP EV+ +K VTEYK D D KK KIVRT++IE Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIE 88 >AF020833-1|AAB71866.1| 320|Homo sapiens eukaryotic translation initiation factor 3 subunit protein. Length = 320 Score = 70.9 bits (166), Expect = 3e-12 Identities = 35/74 (47%), Positives = 45/74 (60%) Frame = +3 Query: 258 RVVSKSIAKRKTWSKFGDSASDKPGPNPATTNVAEDVFMQFITSKEESQRPDDGELDGLK 437 R SK++A+RK W KFG+S D PGPN ATT V++DV M FITSKE+ + E D + Sbjct: 90 RKASKAVARRKNWKKFGNSEFDPPGPNVATTTVSDDVSMTFITSKEDLNCQE--EEDPMN 147 Query: 438 PPSSNVIFKCRTCQ 479 I CR C+ Sbjct: 148 KLKGQKIVSCRICK 161 Score = 54.8 bits (126), Expect = 2e-07 Identities = 23/36 (63%), Positives = 27/36 (75%) Frame = +1 Query: 148 LPPPSEVVENGLKIVTEYKYDNDNKKVKIVRTYKIE 255 LPPP EV+ +K VTEYK D D KK KIVRT++IE Sbjct: 53 LPPPKEVINGNIKTVTEYKIDEDGKKFKIVRTFRIE 88 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 85,087,545 Number of Sequences: 237096 Number of extensions: 1600207 Number of successful extensions: 3525 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 3315 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3525 length of database: 76,859,062 effective HSP length: 87 effective length of database: 56,231,710 effective search space used: 6972732040 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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