Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1073X
(454 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1246 - 35226759-35226860,35227521-35227715,35227804-352283... 150 4e-37
06_01_0457 - 3263519-3263749,3264565-3265175,3265966-3266143 144 2e-35
01_03_0220 - 13905808-13905831,13906694-13906885,13906960-139075... 136 1e-32
03_02_0491 + 8854438-8854657,8854897-8854942,8855268-8855307,885... 109 1e-24
03_05_0488 - 24847076-24847220,24847823-24847872,24848139-248482... 70 8e-13
09_02_0241 + 6179869-6180116,6180406-6180436,6182038-6182190,618... 70 1e-12
05_02_0083 + 6450694-6450766,6451391-6451560,6451633-6451704,645... 66 1e-11
10_07_0165 + 13740611-13740706,13741159-13741215,13741523-137416... 65 3e-11
03_01_0473 - 3639533-3639598,3639848-3639955,3640037-3640126,364... 65 3e-11
03_06_0366 + 33408671-33408745,33409342-33409398,33410398-334104... 63 9e-11
01_06_0339 + 28549449-28549529,28549768-28549914,28550027-285500... 62 2e-10
02_02_0075 - 6572385-6572558,6573416-6573607,6574553-6574630,657... 62 3e-10
06_03_0542 + 21959533-21959785,21960732-21960846,21962815-219629... 61 4e-10
05_01_0319 + 2503963-2504176,2504316-2504376,2504691-2504769,250... 60 8e-10
08_02_0893 + 22327485-22327671,22327756-22328627 46 1e-05
12_02_1128 - 26341118-26341204,26341302-26341441,26341567-263416... 37 0.009
01_06_0894 - 32781957-32782287,32783019-32783284,32783771-327840... 29 1.3
09_04_0040 - 14029565-14029810,14030904-14031182,14032056-14032832 29 2.3
01_05_0681 - 24242485-24242560,24242721-24242785,24242874-242430... 29 2.3
06_01_0817 - 6185881-6187074 28 3.1
01_01_0688 - 5267781-5267814,5269851-5270153,5270605-5270870,527... 28 3.1
07_03_1406 + 26343915-26346032 28 4.0
06_03_1515 - 30707600-30707613,30708093-30708167,30708596-307086... 28 4.0
03_05_0543 - 25404630-25405408,25405461-25405605 28 4.0
11_04_0341 - 16565757-16566418,16566668-16567799,16567965-16568549 27 5.3
07_01_0037 + 301864-302349 27 5.3
05_04_0206 + 19034259-19035462,19036870-19037045,19037752-190379... 27 5.3
01_06_0298 + 28301032-28302408 27 7.1
10_08_1024 + 22371260-22371481,22371514-22372188,22372291-223732... 27 9.3
07_03_1507 - 27228032-27228742 27 9.3
06_01_1013 - 7931756-7935109 27 9.3
06_01_0144 + 1089090-1091390 27 9.3
04_03_0764 + 19367257-19367664 27 9.3
03_02_0246 - 6772369-6772808,6773223-6775788 27 9.3
>02_05_1246 -
35226759-35226860,35227521-35227715,35227804-35228363,
35229299-35229476
Length = 344
Score = 150 bits (364), Expect = 4e-37
Identities = 69/87 (79%), Positives = 77/87 (88%)
Frame = +1
Query: 1 VSFTFGTEVVGKFLSKHEFDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAL 180
VS+TFG + V +FL KH+ DLICRAHQVVEDGYEFFA RQLVT+FSAPNYCGEFDNAGA+
Sbjct: 220 VSYTFGPDKVSEFLEKHDLDLICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAM 279
Query: 181 MSVDETLMCSFQILKPADKRKLYSGST 261
MSVD+TLMCSFQILKPA RK+ GST
Sbjct: 280 MSVDDTLMCSFQILKPA--RKMLGGST 304
>06_01_0457 - 3263519-3263749,3264565-3265175,3265966-3266143
Length = 339
Score = 144 bits (350), Expect = 2e-35
Identities = 62/80 (77%), Positives = 73/80 (91%)
Frame = +1
Query: 1 VSFTFGTEVVGKFLSKHEFDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAL 180
VS+TFG + V +FL H+ DLICRAHQVVEDGYEFFAKRQLVT+FSAPNYCGEFDNAGA+
Sbjct: 237 VSYTFGADKVAEFLQTHDLDLICRAHQVVEDGYEFFAKRQLVTIFSAPNYCGEFDNAGAM 296
Query: 181 MSVDETLMCSFQILKPADKR 240
MS+D++L CSFQILKP+DK+
Sbjct: 297 MSIDDSLTCSFQILKPSDKK 316
>01_03_0220 -
13905808-13905831,13906694-13906885,13906960-13907519,
13910007-13910187
Length = 318
Score = 136 bits (328), Expect = 1e-32
Identities = 60/78 (76%), Positives = 71/78 (91%)
Frame = +1
Query: 1 VSFTFGTEVVGKFLSKHEFDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAL 180
VS TFG + + +FL K++ DLICRAHQVVEDGYEFFA+R+LVT+FSAPNYCGEFDNAGAL
Sbjct: 221 VSCTFGADKLVEFLEKNDLDLICRAHQVVEDGYEFFAQRRLVTIFSAPNYCGEFDNAGAL 280
Query: 181 MSVDETLMCSFQILKPAD 234
+S+DE+LMCSFQILKP D
Sbjct: 281 LSIDESLMCSFQILKPND 298
>03_02_0491 +
8854438-8854657,8854897-8854942,8855268-8855307,
8856025-8856090,8856237-8856318,8857036-8857595,
8857681-8857771,8858300-8858316
Length = 373
Score = 109 bits (262), Expect = 1e-24
Identities = 47/58 (81%), Positives = 52/58 (89%)
Frame = +1
Query: 1 VSFTFGTEVVGKFLSKHEFDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG 174
VS+TFG + V +FL KH+ DLICRAHQVVEDGYEFFA RQLVT+FSAPNYCGEFDNAG
Sbjct: 312 VSYTFGADKVSEFLEKHDLDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAG 369
>03_05_0488 - 24847076-24847220,24847823-24847872,24848139-24848278,
24848358-24848493,24848584-24848683,24848837-24848949,
24849034-24849132,24849227-24849311,24849799-24850037,
24850202-24850372,24850544-24850784,24850899-24851172,
24851481-24851660,24852170-24852251,24852336-24852437,
24853315-24853384,24853725-24853824,24853931-24854025,
24854105-24854184,24854361-24854439,24854603-24854663,
24855570-24855984
Length = 1018
Score = 70.1 bits (164), Expect = 8e-13
Identities = 32/73 (43%), Positives = 49/73 (67%)
Frame = +1
Query: 10 TFGTEVVGKFLSKHEFDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGALMSV 189
TFG + V +F + ++ LI RAH+ V DG+E FA+ L+TLFSA NYCG +NAGA++ +
Sbjct: 860 TFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVL 919
Query: 190 DETLMCSFQILKP 228
L+ +++ P
Sbjct: 920 GRDLVVVPKLIHP 932
>09_02_0241 +
6179869-6180116,6180406-6180436,6182038-6182190,
6182921-6182983,6183396-6183664,6184055-6184133,
6184213-6184263
Length = 297
Score = 69.7 bits (163), Expect = 1e-12
Identities = 30/75 (40%), Positives = 46/75 (61%)
Frame = +1
Query: 7 FTFGTEVVGKFLSKHEFDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGALMS 186
F FG VV F + D ICRAHQ+V +G+++ ++VT++SAPNYC N A++
Sbjct: 205 FLFGGNVVSSFNHTNNIDYICRAHQLVMEGFKWMFNNKIVTVWSAPNYCYRCGNVAAILE 264
Query: 187 VDETLMCSFQILKPA 231
+DE L F++ + A
Sbjct: 265 LDENLNKQFRVFEAA 279
>05_02_0083 +
6450694-6450766,6451391-6451560,6451633-6451704,
6451893-6452043,6452709-6452817,6452906-6453023,
6453214-6453361,6453520-6453768,6454209-6454334,
6454474-6454574,6454728-6454802,6455160-6455219
Length = 483
Score = 66.1 bits (154), Expect = 1e-11
Identities = 27/59 (45%), Positives = 40/59 (67%)
Frame = +1
Query: 1 VSFTFGTEVVGKFLSKHEFDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGA 177
V +FG +V KFL ++ DL+ R+H+V ++GYE +L+T+FSAPNYC + N GA
Sbjct: 387 VGLSFGADVTKKFLQENNLDLVVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGA 445
>10_07_0165 +
13740611-13740706,13741159-13741215,13741523-13741681,
13742315-13742398,13742496-13742567,13742810-13742881,
13743085-13743125,13743296-13743362,13744033-13744224,
13744314-13744403,13744742-13744849,13745089-13745154
Length = 367
Score = 64.9 bits (151), Expect = 3e-11
Identities = 28/78 (35%), Positives = 49/78 (62%)
Frame = +1
Query: 7 FTFGTEVVGKFLSKHEFDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGALMS 186
+TFG ++ +F + L+ RAHQ+V +GY + ++++VT+FSAPNYC N +++
Sbjct: 276 YTFGQDISEQFNHTNNLKLVARAHQLVMEGYNWAHEQKVVTIFSAPNYCYRCGNMASILE 335
Query: 187 VDETLMCSFQILKPADKR 240
VD+ +F +PA +R
Sbjct: 336 VDDCRNHTFIQFEPAPRR 353
>03_01_0473 -
3639533-3639598,3639848-3639955,3640037-3640126,
3640203-3640394,3640952-3641018,3641472-3641512,
3641762-3641779,3641984-3642055,3642154-3642237,
3642296-3642373,3642703-3642759,3643374-3643469
Length = 322
Score = 64.9 bits (151), Expect = 3e-11
Identities = 28/78 (35%), Positives = 49/78 (62%)
Frame = +1
Query: 7 FTFGTEVVGKFLSKHEFDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGALMS 186
+TFG ++ +F + L+ RAHQ+V +GY + ++++VT+FSAPNYC N +++
Sbjct: 231 YTFGQDISEQFNHTNNLKLVARAHQLVMEGYNWAHEQKVVTIFSAPNYCYRCGNMASILE 290
Query: 187 VDETLMCSFQILKPADKR 240
VD+ +F +PA +R
Sbjct: 291 VDDCNSHTFIQFEPAPRR 308
>03_06_0366 +
33408671-33408745,33409342-33409398,33410398-33410481,
33410575-33410646,33410768-33410839,33411011-33411051,
33411517-33411583,33411673-33411864,33411947-33412036,
33412111-33412218,33412513-33412578
Length = 307
Score = 63.3 bits (147), Expect = 9e-11
Identities = 28/78 (35%), Positives = 49/78 (62%)
Frame = +1
Query: 7 FTFGTEVVGKFLSKHEFDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGALMS 186
+TFG ++ +F + LI RAHQ+V +G+ + ++++VT+FSAPNYC N +++
Sbjct: 216 YTFGQDISEQFNHTNNLRLIARAHQLVMEGFNWAHEQKVVTIFSAPNYCYRCGNMASILE 275
Query: 187 VDETLMCSFQILKPADKR 240
VD+ +F +PA +R
Sbjct: 276 VDDCREHTFIQFEPAPRR 293
>01_06_0339 +
28549449-28549529,28549768-28549914,28550027-28550094,
28550771-28550828,28551474-28551584,28551668-28551718,
28552308-28552451,28552570-28552665,28552781-28552852,
28553392-28553475
Length = 303
Score = 62.5 bits (145), Expect = 2e-10
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Frame = +1
Query: 13 FGTEVVGKFLSKHEFDLICRAHQVVEDGYEF-FAKRQLVTLFSAPNYCGEFDNAGALMSV 189
FG+ V +F + DL+CRAHQ+V++G ++ F + LVT++SAPNYC N +++S
Sbjct: 213 FGSRVTAEFNHINNLDLVCRAHQLVQEGLKYMFQDKGLVTVWSAPNYCYRCGNVASILSF 272
Query: 190 DETL 201
ET+
Sbjct: 273 SETM 276
>02_02_0075 -
6572385-6572558,6573416-6573607,6574553-6574630,
6574712-6574820,6575442-6575556,6576280-6576535
Length = 307
Score = 61.7 bits (143), Expect = 3e-10
Identities = 27/78 (34%), Positives = 46/78 (58%)
Frame = +1
Query: 7 FTFGTEVVGKFLSKHEFDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGALMS 186
+TFG ++ +F + LI RAHQ+V +G+ + + +VT+FSAPNYC N A++
Sbjct: 216 YTFGQDIAQQFNHTNGLSLISRAHQLVMEGFNWCQDKNVVTVFSAPNYCYRCGNMAAILE 275
Query: 187 VDETLMCSFQILKPADKR 240
+ E + +F PA ++
Sbjct: 276 IGENMDQNFLQFDPAPRQ 293
>06_03_0542 +
21959533-21959785,21960732-21960846,21962815-21962923,
21963027-21963104,21964200-21964391,21964995-21965168
Length = 306
Score = 61.3 bits (142), Expect = 4e-10
Identities = 27/78 (34%), Positives = 46/78 (58%)
Frame = +1
Query: 7 FTFGTEVVGKFLSKHEFDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGALMS 186
+TFG ++ +F + LI RAHQ+V +G+ + + +VT+FSAPNYC N A++
Sbjct: 215 YTFGQDIAQQFNHTNGLTLISRAHQLVMEGFNWCQDKNVVTVFSAPNYCYRCGNMAAILE 274
Query: 187 VDETLMCSFQILKPADKR 240
+ E + +F PA ++
Sbjct: 275 IGENMDQNFLQFDPAPRQ 292
>05_01_0319 +
2503963-2504176,2504316-2504376,2504691-2504769,
2504861-2504940,2505046-2505140,2505748-2505847,
2506647-2506716,2507657-2507758,2507972-2508053,
2508257-2508304,2508841-2509009,2509089-2509314,
2509961-2510131,2510200-2510438,2510600-2510684,
2510778-2510876,2510954-2511153,2511232-2511307,
2511463-2511675,2511763-2511815,2511999-2512151,
2512474-2512606
Length = 915
Score = 60.1 bits (139), Expect = 8e-10
Identities = 27/49 (55%), Positives = 34/49 (69%)
Frame = +1
Query: 10 TFGTEVVGKFLSKHEFDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCG 156
TFG + V +F ++ LI RAH+ V DG+E FA QL+TLFSA NYCG
Sbjct: 730 TFGPDRVTEFCKRNRLQLIIRAHECVMDGFERFAHGQLITLFSATNYCG 778
>08_02_0893 + 22327485-22327671,22327756-22328627
Length = 352
Score = 46.4 bits (105), Expect = 1e-05
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +1
Query: 1 VSFTFGTEVVGKFLSKHEFDLICRAHQ 81
VSFTFG + V +FL+KH+ DLICRAHQ
Sbjct: 223 VSFTFGADKVTEFLNKHDLDLICRAHQ 249
Score = 41.9 bits (94), Expect = 2e-04
Identities = 24/49 (48%), Positives = 30/49 (61%)
Frame = +3
Query: 81 GRRGWIRVLCEEATRHTLLGTKLLRGV**CRRPDVRGRDADVLVPDPEA 227
G G +RVL +A +LG +LLR V RR D RGR +LVPDP+A
Sbjct: 286 GGGGRLRVLRGQAAGDHILGAELLRRVQQRRRADERGRQPALLVPDPQA 334
>12_02_1128 -
26341118-26341204,26341302-26341441,26341567-26341663,
26341755-26341830,26341919-26342118,26342199-26342297,
26342395-26342479,26342786-26343024,26343233-26343403,
26343605-26343848,26343980-26344253,26344755-26344934,
26345342-26345423,26346209-26346278,26346802-26346901,
26347003-26347097,26347181-26347317,26347342-26347420,
26347591-26347651,26348580-26349009
Length = 981
Score = 36.7 bits (81), Expect = 0.009
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = +1
Query: 10 TFGTEVVGKFLSKHEFDLICRAHQVVEDGYEFFAK 114
TFG + V +F + ++ LI RAH+ V DG+E FA+
Sbjct: 872 TFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQ 906
>01_06_0894 -
32781957-32782287,32783019-32783284,32783771-32784040,
32785007-32785134,32785284-32785893
Length = 534
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +3
Query: 30 GQVLVQTRVRLDLSRAPGRRGWIRVLCEEATRHT 131
GQ+ + TR R+ L AP R WIR L T T
Sbjct: 228 GQLGIITRARIALEPAPHRVRWIRALYSNFTEFT 261
>09_04_0040 - 14029565-14029810,14030904-14031182,14032056-14032832
Length = 433
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 201 DVLVPDPEAGRQAQAVLGLNMGRPNTPPRAQPKNKK 308
D + D G QAVL L RP+TPP+ Q K+
Sbjct: 205 DEVPGDARLGGIRQAVLLLERARPSTPPQTQADAKE 240
>01_05_0681 -
24242485-24242560,24242721-24242785,24242874-24243029,
24243073-24243121,24243291-24243366,24243456-24243666,
24244038-24244160,24244245-24244363,24244439-24244532,
24245123-24245233,24245336-24245392
Length = 378
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 395 PFKVL*VYSGEGGVSMRVSADGAR 324
P+KVL YSG GG+ ++A GAR
Sbjct: 6 PWKVLEFYSGIGGMRYSLAASGAR 29
>06_01_0817 - 6185881-6187074
Length = 397
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -3
Query: 254 PEYSLRLSAGFRIWNEHISVSSTDIRAP--ALSNSPQ*FGAEKSVTSCL 114
P S + FR+W+E +S S+ + AP A + SP GAE + L
Sbjct: 168 PHNSRYGNPAFRLWHEKLSDSANQLIAPIMATAGSPDLAGAEAELAPYL 216
>01_01_0688 -
5267781-5267814,5269851-5270153,5270605-5270870,
5273319-5273785,5273877-5274501
Length = 564
Score = 28.3 bits (60), Expect = 3.1
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 30 GQVLVQTRVRLDLSRAPGRRGWIRVLCEEATRHT 131
GQ V TR R+ L+ AP R W+R + A T
Sbjct: 233 GQFGVITRARIPLAPAPARARWVRFVYTTAAAMT 266
>07_03_1406 + 26343915-26346032
Length = 705
Score = 27.9 bits (59), Expect = 4.0
Identities = 20/59 (33%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Frame = +3
Query: 225 AGRQAQAVLGLNMGRPNTPPRAQPKNKKN*WPHTRA-VRRHTHGHPSLTAVHLQYLERV 398
A A AV G RP PP A P P A RR +H S H L R+
Sbjct: 5 AAAAAAAVKGRIKSRPRLPPLASPATTSTCAPAPAATARRGSHAAASQVVSHASLLLRL 63
>06_03_1515 -
30707600-30707613,30708093-30708167,30708596-30708647,
30708751-30708831,30709145-30709219,30709870-30709977,
30710026-30710032,30710133-30710268,30710361-30710685
Length = 290
Score = 27.9 bits (59), Expect = 4.0
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 269 PQHAAARTAQEQEELMAPHARRPPTHAWT-PLPHRCTLTI 385
P A A T + +AP RPP W+ P P R +LT+
Sbjct: 18 PSPAVAATRRRLRFPLAPPRPRPPPLRWSPPSPFRLSLTL 57
>03_05_0543 - 25404630-25405408,25405461-25405605
Length = 307
Score = 27.9 bits (59), Expect = 4.0
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 266 PPQHAAARTAQEQEELMAPHAR 331
PP AAA A+E+EE MA AR
Sbjct: 214 PPPAAAAAAAEEEEERMAREAR 235
>11_04_0341 - 16565757-16566418,16566668-16567799,16567965-16568549
Length = 792
Score = 27.5 bits (58), Expect = 5.3
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +3
Query: 186 RGRDADVLVPDPEAGRQAQAVLGLNMGRPNTPPRAQPKNKKN*WPHTRAVRRHTH 350
RG D + PE R+ +A RP +PPR +P + ++ RA R H H
Sbjct: 304 RGHDERSVHSLPERHRERRAE------RPRSPPRQRPVDLRDMINQCRAARGHRH 352
>07_01_0037 + 301864-302349
Length = 161
Score = 27.5 bits (58), Expect = 5.3
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -2
Query: 363 GRGVHACVGGRRACGAINSSCSWAVRAAA 277
G GV A V G CG ++ W AAA
Sbjct: 91 GGGVVAAVDGMEGCGTVSGRMGWHSSAAA 119
>05_04_0206 +
19034259-19035462,19036870-19037045,19037752-19037975,
19038133-19038914,19039337-19039494
Length = 847
Score = 27.5 bits (58), Expect = 5.3
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +3
Query: 270 PNTPPRAQPKNKKN*WPHTRAVRRHTHGHPSLTAV 374
P PP K KK H A +HT P +T V
Sbjct: 307 PPRPPAVSSKKKKGKGKHRAAHHQHTESAPPVTLV 341
>01_06_0298 + 28301032-28302408
Length = 458
Score = 27.1 bits (57), Expect = 7.1
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 327 ACGAINSSCSWAVRAAACWGGPC 259
AC N+ SWAVR A G PC
Sbjct: 114 ACVVANAFVSWAVRVAGDVGLPC 136
>10_08_1024 +
22371260-22371481,22371514-22372188,22372291-22373236,
22389377-22389552
Length = 672
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3
Query: 267 RPNTPPRAQPKNKKN*WPHTRAVRRHTH 350
RP +PPR +P + ++ RA R H H
Sbjct: 204 RPRSPPRQRPVDLRDTINQRRAARGHRH 231
>07_03_1507 - 27228032-27228742
Length = 236
Score = 26.6 bits (56), Expect = 9.3
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 213 PDPEAGRQAQAVLGLNMGRPNTPPRAQPKNKKN*WPHTRAVRR 341
P P + A V+ ++ G P T P A P + P RAV R
Sbjct: 109 PPPSSASAAVPVVAVDRGEPKTVPLASPFPPLSRVPLRRAVGR 151
>06_01_1013 - 7931756-7935109
Length = 1117
Score = 26.6 bits (56), Expect = 9.3
Identities = 16/45 (35%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Frame = +2
Query: 257 QHGPPQH---AAARTAQEQEELMAPHARRPPTHAWTPLPHRCTLT 382
+ GPPQ AA Q++ HA PT A P P R T
Sbjct: 84 RRGPPQERPSAAPPPPPPQQQQRQQHAAPAPTRAAAPAPARVAAT 128
>06_01_0144 + 1089090-1091390
Length = 766
Score = 26.6 bits (56), Expect = 9.3
Identities = 17/64 (26%), Positives = 27/64 (42%)
Frame = -3
Query: 203 ISVSSTDIRAPALSNSPQ*FGAEKSVTSCLFAKNSYPSSTTWCARQIKSNSCLDKNLPTT 24
+S+ T P SP G+ + + + YPS T + S CL LPT
Sbjct: 464 VSLLCTFSAKPRRRESPTFRGSVRCILWLRRNLSHYPSLITIKQFTVLSTCCLSPRLPTA 523
Query: 23 SVPK 12
++P+
Sbjct: 524 TLPR 527
>04_03_0764 + 19367257-19367664
Length = 135
Score = 26.6 bits (56), Expect = 9.3
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -2
Query: 318 AINSSCSW-AVRAAACWGGPC*ARVQLALVGRLQDLERAHQRLVHGHQGACIIKLPAV 148
+++S C AV+ C G A +L L R +DLERA RLV G GA +P V
Sbjct: 45 SVSSCCMCHAVKRLFCGMGVHPAVHELDLDPRGRDLERALARLV-GAGGAAAAAVPVV 101
>03_02_0246 - 6772369-6772808,6773223-6775788
Length = 1001
Score = 26.6 bits (56), Expect = 9.3
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = -3
Query: 368 GEGGVSMRVSADGARVGPLILLVLGLCARRRVGAAHVEPEYSLRLSAGFRIWNEHI 201
G+GG + GA G ++ V L A R GAAH + +S + RI + HI
Sbjct: 687 GKGGSG--IVYKGAMPGGAVVAVKRLPAMGRSGAAHDDYGFSAEIQTLGRIRHRHI 740
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,298,578
Number of Sequences: 37544
Number of extensions: 294911
Number of successful extensions: 1191
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1189
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 883560296
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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