Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1073X
(454 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50882| Best HMM Match : Metallophos (HMM E-Value=8.00001e-41) 161 2e-40
SB_36816| Best HMM Match : No HMM Matches (HMM E-Value=.) 155 2e-38
SB_19115| Best HMM Match : No HMM Matches (HMM E-Value=.) 112 1e-25
SB_10504| Best HMM Match : MBOAT (HMM E-Value=0.16) 91 5e-19
SB_38314| Best HMM Match : Metallophos (HMM E-Value=5.1e-07) 62 2e-10
SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 4e-10
SB_9847| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 4e-10
SB_56433| Best HMM Match : Metallophos (HMM E-Value=1.7e-15) 58 3e-09
SB_3587| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 1e-07
SB_43994| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 29 2.4
SB_14350| Best HMM Match : DUF1208 (HMM E-Value=0) 27 5.5
SB_8335| Best HMM Match : Dehydrin (HMM E-Value=7.2) 27 5.5
SB_39605| Best HMM Match : zf-TRAF (HMM E-Value=5.3e-39) 27 7.3
SB_34575| Best HMM Match : zf-TRAF (HMM E-Value=2.5e-15) 27 7.3
SB_18229| Best HMM Match : RVT_1 (HMM E-Value=0.82) 27 7.3
SB_59356| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_58058| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 27 9.6
>SB_50882| Best HMM Match : Metallophos (HMM E-Value=8.00001e-41)
Length = 293
Score = 161 bits (392), Expect = 2e-40
Identities = 74/86 (86%), Positives = 79/86 (91%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 VSFTFGTEVVGKFLSKHEFDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAL 180
VSFTFG ++V KFL KH+ DLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGA+
Sbjct: 188 VSFTFGPDIVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAM 247
Query: 181 MSVDETLMCSFQILKPADKRKL-YSG 255
MSVDETLMCSFQILKPADK+K Y G
Sbjct: 248 MSVDETLMCSFQILKPADKKKFPYGG 273
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3
Query: 252 GLNMGRPNTPPRAQPKNKK 308
GLN GRP TPPR Q + K
Sbjct: 273 GLNSGRPVTPPRGQQQKAK 291
>SB_36816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 155 bits (376), Expect = 2e-38
Identities = 68/83 (81%), Positives = 77/83 (92%)
Frame = +1
Query: 1 VSFTFGTEVVGKFLSKHEFDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAL 180
VSFTFG +VV KFL++H+ DLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG +
Sbjct: 96 VSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGM 155
Query: 181 MSVDETLMCSFQILKPADKRKLY 249
MSVD+TLMCSFQILKP++K+ Y
Sbjct: 156 MSVDDTLMCSFQILKPSEKKAKY 178
Score = 31.1 bits (67), Expect = 0.45
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +3
Query: 252 GLNMGRPNTPPRAQPKNKK 308
GLN GRP TPPR P+NKK
Sbjct: 182 GLNSGRPVTPPRG-PQNKK 199
>SB_19115| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 112 bits (269), Expect = 1e-25
Identities = 53/83 (63%), Positives = 63/83 (75%)
Frame = +1
Query: 1 VSFTFGTEVVGKFLSKHEFDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAL 180
+SF E + + L + D +VVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG +
Sbjct: 13 MSFVIFGEKLAEKLERTARDSTLYYRKVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGM 72
Query: 181 MSVDETLMCSFQILKPADKRKLY 249
MSVD+TLMCSFQILKP++K+ Y
Sbjct: 73 MSVDDTLMCSFQILKPSEKKAKY 95
Score = 31.1 bits (67), Expect = 0.45
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +3
Query: 252 GLNMGRPNTPPRAQPKNKK 308
GLN GRP TPPR P+NKK
Sbjct: 99 GLNSGRPVTPPRG-PQNKK 116
>SB_10504| Best HMM Match : MBOAT (HMM E-Value=0.16)
Length = 465
Score = 90.6 bits (215), Expect = 5e-19
Identities = 47/78 (60%), Positives = 54/78 (69%)
Frame = +1
Query: 1 VSFTFGTEVVGKFLSKHEFDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAL 180
VS+TFG +VV ++L K+ F L+ RAHQ LVTLFSAPNYCGEFDNAG +
Sbjct: 148 VSWTFGGDVVREYLEKYGFSLVVRAHQ-------------LVTLFSAPNYCGEFDNAGGV 194
Query: 181 MSVDETLMCSFQILKPAD 234
MSV E LMCSF ILKP D
Sbjct: 195 MSVGENLMCSFSILKPGD 212
>SB_38314| Best HMM Match : Metallophos (HMM E-Value=5.1e-07)
Length = 199
Score = 62.5 bits (145), Expect = 2e-10
Identities = 29/68 (42%), Positives = 41/68 (60%)
Frame = +1
Query: 7 FTFGTEVVGKFLSKHEFDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGALMS 186
+TFG ++ F + LI RAHQ+V +GY + R +VT+FSAPNYC N A+M
Sbjct: 131 YTFGQDISETFNHTNGLTLITRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIME 190
Query: 187 VDETLMCS 210
+D+ L S
Sbjct: 191 LDDALKYS 198
>SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 540
Score = 61.3 bits (142), Expect = 4e-10
Identities = 26/71 (36%), Positives = 41/71 (57%)
Frame = +1
Query: 1 VSFTFGTEVVGKFLSKHEFDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAL 180
V FG ++ KF + +LI R+H+V +GYE + +T+FSAPNYC + N GA
Sbjct: 378 VGIQFGPDITEKFCKDNGLELIIRSHEVKPEGYEVMHDGKCITIFSAPNYCDQMGNKGAF 437
Query: 181 MSVDETLMCSF 213
+++ + L F
Sbjct: 438 ITMGDDLKPKF 448
>SB_9847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 61.3 bits (142), Expect = 4e-10
Identities = 26/66 (39%), Positives = 43/66 (65%)
Frame = +1
Query: 34 KFLSKHEFDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGALMSVDETLMCSF 213
++ + ++ DLICRAHQ+V +GY++ ++T++SAPNYC N A++ +DE L F
Sbjct: 45 QYNAANDIDLICRAHQLVMEGYKWHFNETVLTVWSAPNYCYRCGNVAAILELDEHLKREF 104
Query: 214 QILKPA 231
I + A
Sbjct: 105 TIFEAA 110
>SB_56433| Best HMM Match : Metallophos (HMM E-Value=1.7e-15)
Length = 417
Score = 58.4 bits (135), Expect = 3e-09
Identities = 23/59 (38%), Positives = 38/59 (64%)
Frame = +1
Query: 13 FGTEVVGKFLSKHEFDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGALMSV 189
FG +V + L KH F+L+ R+H+ +GYE+ ++++T+FSA NY + N GA M +
Sbjct: 146 FGPDVTSQVLRKHNFELLVRSHECKYEGYEYMHNKKVITIFSASNYYEQGSNRGAYMKI 204
>SB_3587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 155
Score = 53.2 bits (122), Expect = 1e-07
Identities = 21/53 (39%), Positives = 35/53 (66%)
Frame = +1
Query: 37 FLSKHEFDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGALMSVDE 195
F+ + LICRAHQ+V +GY++ +LVT++SAPNYC N ++++ +
Sbjct: 1 FVHINNLKLICRAHQLVHEGYKYMFDEKLVTVWSAPNYCYRCGNIASILAFSD 53
>SB_43994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 403
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +3
Query: 213 PDPEAGRQAQAVLGLNMGRPNTPPRAQPKNKKN 311
P P G Q ++ PN P R +PK KN
Sbjct: 311 PKPPPGEQPESTTPQEPSDPNKPKRGRPKGSKN 343
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 28.7 bits (61), Expect = 2.4
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = -2
Query: 252 RVQLALVGRLQDLERAHQRLVHGHQGACIIKLPAVVWCREECDELPLRKELVSILDDLVR 73
R++L L +L+ + + HQ L++ HQ K D+ +ELV LD+L++
Sbjct: 3238 RIRLLLQQQLESMRQQHQILINKHQNTLDGK-----------DDSQAGQELVQALDNLLK 3286
Query: 72 ATDQV 58
DQ+
Sbjct: 3287 ELDQI 3291
>SB_14350| Best HMM Match : DUF1208 (HMM E-Value=0)
Length = 280
Score = 27.5 bits (58), Expect = 5.5
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = -3
Query: 125 TSCLFAKNSYPSSTTWCARQIKSNSCLDK 39
T C A+N +S++ C++++KS + L+K
Sbjct: 120 TKCKQARNDVKNSSSLCSKEVKSFNSLEK 148
>SB_8335| Best HMM Match : Dehydrin (HMM E-Value=7.2)
Length = 531
Score = 27.5 bits (58), Expect = 5.5
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +3
Query: 42 VQTRVRLDLSRAPGRRGWIRVLCEEATRHTLLGTKLLRGV**CRRPDVRGR 194
+Q R R L A R+ + + E+ TRH L K RG+ R R R
Sbjct: 98 LQERERQKLEHAQQRKRELEIQAEQETRHLLAAHKQDRGIEPHRDESTRNR 148
>SB_39605| Best HMM Match : zf-TRAF (HMM E-Value=5.3e-39)
Length = 684
Score = 27.1 bits (57), Expect = 7.3
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 257 QHGPPQHAAARTAQEQEELMAPHARRPP 340
QH QH+ R++ E+E M P PP
Sbjct: 297 QHTRQQHSRTRSSNERENQMPPSNSAPP 324
>SB_34575| Best HMM Match : zf-TRAF (HMM E-Value=2.5e-15)
Length = 262
Score = 27.1 bits (57), Expect = 7.3
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 257 QHGPPQHAAARTAQEQEELMAPHARRPP 340
QH QH+ R++ E+E M P PP
Sbjct: 212 QHTRQQHSRTRSSNERENQMPPSNSAPP 239
>SB_18229| Best HMM Match : RVT_1 (HMM E-Value=0.82)
Length = 458
Score = 27.1 bits (57), Expect = 7.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 272 QHAAARTAQEQEELMAPHARRPPTHAWTPLPHR 370
+ A A T QE+ E+ PH RRP A P H+
Sbjct: 381 KRADAATHQEEIEMHCPHPRRPAKPA-MPTTHK 412
>SB_59356| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 395
Score = 27.1 bits (57), Expect = 7.3
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -1
Query: 454 IRL*RSCIQLRNK-DSLKTSTRSRYCKCTAVREGCPCVCRRTARVW 320
I++ RSC + + S KTS+ S+ K V+ C TAR W
Sbjct: 40 IQIRRSCFKQNGRHQSEKTSSGSKIVKYKTVKANTAIRCVLTARSW 85
>SB_58058| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 27.1 bits (57), Expect = 7.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 272 QHAAARTAQEQEELMAPHARRPPTHAWTPLPHR 370
+ A A T QE+ E+ PH RRP A P H+
Sbjct: 296 KRADAATHQEEIEMHCPHPRRPAKPA-MPTTHK 327
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 26.6 bits (56), Expect = 9.6
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3
Query: 270 PNTPPRAQPKNKKN*WPHT 326
P PPR +PKNK N P T
Sbjct: 1164 PKKPPRKKPKNKGNKSPST 1182
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 26.6 bits (56), Expect = 9.6
Identities = 11/34 (32%), Positives = 13/34 (38%)
Frame = -2
Query: 363 GRGVHACVGGRRACGAINSSCSWAVRAAACWGGP 262
G G+ C G N W +R A WG P
Sbjct: 248 GMGMGGCQGDSGGPFVCNEGGRWVLRGAVSWGQP 281
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,738,188
Number of Sequences: 59808
Number of extensions: 301710
Number of successful extensions: 985
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 908427626
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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