Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1073X
         (454 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY745212-1|AAU93479.1|  104|Anopheles gambiae cytochrome P450 pr...    25   0.94 
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    24   2.2  
DQ974165-1|ABJ52805.1|  482|Anopheles gambiae serpin 5 protein.        23   6.7  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    22   8.8  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    22   8.8  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    22   8.8  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    22   8.8  
AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...    22   8.8  

>AY745212-1|AAU93479.1|  104|Anopheles gambiae cytochrome P450
           protein.
          Length = 104

 Score = 25.4 bits (53), Expect = 0.94
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +3

Query: 177 PDVRGRDADVLVPDPEAGRQAQAVLGLNMG 266
           PD  G D D  +P+   GR   A    +MG
Sbjct: 52  PDAEGFDPDRFLPERSQGRHPHAYAPFSMG 81


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 370 LYTYNTLNGLMFLVNLCFLIECMSV 444
           L T++  NG  F+ +   +IEC +V
Sbjct: 46  LRTFDLNNGFRFIASAAIVIECQAV 70


>DQ974165-1|ABJ52805.1|  482|Anopheles gambiae serpin 5 protein.
          Length = 482

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 186 RGRDADVLVPDPEAGRQ 236
           RGR  ++L+ DP+ G Q
Sbjct: 236 RGRIGEILLDDPDPGTQ 252


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = +3

Query: 174 RPDVRGRDADVLVPDPEAGRQAQAVLGLNMGRPNTPPRAQPKNK 305
           +P  RG+ A ++    E G  A         RP  PP+  P+ K
Sbjct: 612 QPYCRGKSATMIDGCFEEGENAIVPTPPTTRRPIAPPKNFPRGK 655


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 135 EECDELPLRKELVSILDDLVRAT 67
           ++  E+PLRK    +  D+VR T
Sbjct: 496 QQLSEIPLRKNNFMLPPDIVRIT 518


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 280 GVLGRPMLSPSTACA 236
           GVL RPM  P+  CA
Sbjct: 210 GVLVRPMHPPNVTCA 224


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 280 GVLGRPMLSPSTACA 236
           GVL RPM  P+  CA
Sbjct: 210 GVLVRPMHPPNVTCA 224


>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score = 22.2 bits (45), Expect = 8.8
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 297 KNKKN*WPHTRAVRRHTHGHP 359
           K K+N WP  R V  +   HP
Sbjct: 190 KVKRNCWPKVRGVAMNPVEHP 210


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 488,276
Number of Sequences: 2352
Number of extensions: 10079
Number of successful extensions: 27
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38694201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)