Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1072
(651 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 174 3e-43
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 174 3e-43
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 174 3e-43
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 174 3e-43
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 174 3e-43
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 174 3e-43
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 174 3e-43
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 174 3e-43
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 174 3e-43
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 174 3e-43
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 170 3e-42
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 170 3e-42
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 170 3e-42
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 170 3e-42
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 170 3e-42
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 167 2e-41
AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4 pr... 160 3e-39
Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4 prot... 113 7e-25
AY496231-1|AAS77217.1| 281|Homo sapiens truncated alpha-1,4-gal... 30 6.2
AF513325-1|AAP47166.1| 275|Homo sapiens alpha-1,4-galactosyltra... 30 6.2
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 174 bits (423), Expect = 3e-43
Identities = 81/134 (60%), Positives = 100/134 (74%), Gaps = 2/134 (1%)
Frame = +1
Query: 256 AGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHD 435
AGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+LVTHD
Sbjct: 84 AGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHD 143
Query: 436 GRTIRYPDPLIKVNDSIQLDIATTRLWTSSSLSPGT-CDDHGRRNLGRVGTSCPRET-SG 609
RTIRYPDPLIKVND+IQ+D+ T ++ G C G NLGR+G RE G
Sbjct: 144 ARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPG 203
Query: 610 SFDIVHIKDSTGHT 651
SFD+VH+KD+ G++
Sbjct: 204 SFDVVHVKDANGNS 217
Score = 151 bits (365), Expect = 3e-36
Identities = 69/82 (84%), Positives = 74/82 (90%)
Frame = +2
Query: 8 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 187
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 188 VLKIVKQRLIKVDGKVRTDPTY 253
V KI QR IK+DGKVRTD TY
Sbjct: 61 VKKICMQRFIKIDGKVRTDITY 82
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 174 bits (423), Expect = 3e-43
Identities = 81/134 (60%), Positives = 100/134 (74%), Gaps = 2/134 (1%)
Frame = +1
Query: 256 AGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHD 435
AGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+LVTHD
Sbjct: 65 AGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHD 124
Query: 436 GRTIRYPDPLIKVNDSIQLDIATTRLWTSSSLSPGT-CDDHGRRNLGRVGTSCPRET-SG 609
RTIRYPDPLIKVND+IQ+D+ T ++ G C G NLGR+G RE G
Sbjct: 125 ARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPG 184
Query: 610 SFDIVHIKDSTGHT 651
SFD+VH+KD+ G++
Sbjct: 185 SFDVVHVKDANGNS 198
Score = 111 bits (266), Expect = 3e-24
Identities = 53/64 (82%), Positives = 57/64 (89%)
Frame = +2
Query: 62 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRT 241
MLDKL GV+APRPS GPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRT
Sbjct: 1 MLDKLTGVFAPRPS-GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRT 59
Query: 242 DPTY 253
D TY
Sbjct: 60 DITY 63
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 174 bits (423), Expect = 3e-43
Identities = 81/134 (60%), Positives = 100/134 (74%), Gaps = 2/134 (1%)
Frame = +1
Query: 256 AGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHD 435
AGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+LVTHD
Sbjct: 84 AGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHD 143
Query: 436 GRTIRYPDPLIKVNDSIQLDIATTRLWTSSSLSPGT-CDDHGRRNLGRVGTSCPRET-SG 609
RTIRYPDPLIKVND+IQ+D+ T ++ G C G NLGR+G RE G
Sbjct: 144 ARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPG 203
Query: 610 SFDIVHIKDSTGHT 651
SFD+VH+KD+ G++
Sbjct: 204 SFDVVHVKDANGNS 217
Score = 151 bits (365), Expect = 3e-36
Identities = 69/82 (84%), Positives = 74/82 (90%)
Frame = +2
Query: 8 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 187
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 188 VLKIVKQRLIKVDGKVRTDPTY 253
V KI QR IK+DGKVRTD TY
Sbjct: 61 VKKICMQRFIKIDGKVRTDITY 82
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 174 bits (423), Expect = 3e-43
Identities = 81/134 (60%), Positives = 100/134 (74%), Gaps = 2/134 (1%)
Frame = +1
Query: 256 AGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHD 435
AGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+LVTHD
Sbjct: 84 AGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHD 143
Query: 436 GRTIRYPDPLIKVNDSIQLDIATTRLWTSSSLSPGT-CDDHGRRNLGRVGTSCPRET-SG 609
RTIRYPDPLIKVND+IQ+D+ T ++ G C G NLGR+G RE G
Sbjct: 144 ARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPG 203
Query: 610 SFDIVHIKDSTGHT 651
SFD+VH+KD+ G++
Sbjct: 204 SFDVVHVKDANGNS 217
Score = 151 bits (365), Expect = 3e-36
Identities = 69/82 (84%), Positives = 74/82 (90%)
Frame = +2
Query: 8 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 187
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 188 VLKIVKQRLIKVDGKVRTDPTY 253
V KI QR IK+DGKVRTD TY
Sbjct: 61 VKKICMQRFIKIDGKVRTDITY 82
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 174 bits (423), Expect = 3e-43
Identities = 81/134 (60%), Positives = 100/134 (74%), Gaps = 2/134 (1%)
Frame = +1
Query: 256 AGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHD 435
AGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+LVTHD
Sbjct: 84 AGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHD 143
Query: 436 GRTIRYPDPLIKVNDSIQLDIATTRLWTSSSLSPGT-CDDHGRRNLGRVGTSCPRET-SG 609
RTIRYPDPLIKVND+IQ+D+ T ++ G C G NLGR+G RE G
Sbjct: 144 ARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPG 203
Query: 610 SFDIVHIKDSTGHT 651
SFD+VH+KD+ G++
Sbjct: 204 SFDVVHVKDANGNS 217
Score = 151 bits (365), Expect = 3e-36
Identities = 69/82 (84%), Positives = 74/82 (90%)
Frame = +2
Query: 8 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 187
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 188 VLKIVKQRLIKVDGKVRTDPTY 253
V KI QR IK+DGKVRTD TY
Sbjct: 61 VKKICMQRFIKIDGKVRTDITY 82
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 174 bits (423), Expect = 3e-43
Identities = 81/134 (60%), Positives = 100/134 (74%), Gaps = 2/134 (1%)
Frame = +1
Query: 256 AGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHD 435
AGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+LVTHD
Sbjct: 84 AGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHD 143
Query: 436 GRTIRYPDPLIKVNDSIQLDIATTRLWTSSSLSPGT-CDDHGRRNLGRVGTSCPRET-SG 609
RTIRYPDPLIKVND+IQ+D+ T ++ G C G NLGR+G RE G
Sbjct: 144 ARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPG 203
Query: 610 SFDIVHIKDSTGHT 651
SFD+VH+KD+ G++
Sbjct: 204 SFDVVHVKDANGNS 217
Score = 151 bits (365), Expect = 3e-36
Identities = 69/82 (84%), Positives = 74/82 (90%)
Frame = +2
Query: 8 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 187
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 188 VLKIVKQRLIKVDGKVRTDPTY 253
V KI QR IK+DGKVRTD TY
Sbjct: 61 VKKICMQRFIKIDGKVRTDITY 82
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 174 bits (423), Expect = 3e-43
Identities = 81/134 (60%), Positives = 100/134 (74%), Gaps = 2/134 (1%)
Frame = +1
Query: 256 AGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHD 435
AGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+LVTHD
Sbjct: 64 AGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHD 123
Query: 436 GRTIRYPDPLIKVNDSIQLDIATTRLWTSSSLSPGT-CDDHGRRNLGRVGTSCPRET-SG 609
RTIRYPDPLIKVND+IQ+D+ T ++ G C G NLGR+G RE G
Sbjct: 124 ARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPG 183
Query: 610 SFDIVHIKDSTGHT 651
SFD+VH+KD+ G++
Sbjct: 184 SFDVVHVKDANGNS 197
Score = 113 bits (273), Expect = 4e-25
Identities = 52/62 (83%), Positives = 56/62 (90%)
Frame = +2
Query: 68 DKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDP 247
DKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD
Sbjct: 1 DKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDI 60
Query: 248 TY 253
TY
Sbjct: 61 TY 62
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 174 bits (423), Expect = 3e-43
Identities = 81/134 (60%), Positives = 100/134 (74%), Gaps = 2/134 (1%)
Frame = +1
Query: 256 AGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHD 435
AGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+LVTHD
Sbjct: 84 AGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHD 143
Query: 436 GRTIRYPDPLIKVNDSIQLDIATTRLWTSSSLSPGT-CDDHGRRNLGRVGTSCPRET-SG 609
RTIRYPDPLIKVND+IQ+D+ T ++ G C G NLGR+G RE G
Sbjct: 144 ARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPG 203
Query: 610 SFDIVHIKDSTGHT 651
SFD+VH+KD+ G++
Sbjct: 204 SFDVVHVKDANGNS 217
Score = 151 bits (365), Expect = 3e-36
Identities = 69/82 (84%), Positives = 74/82 (90%)
Frame = +2
Query: 8 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 187
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 188 VLKIVKQRLIKVDGKVRTDPTY 253
V KI QR IK+DGKVRTD TY
Sbjct: 61 VKKICMQRFIKIDGKVRTDITY 82
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 174 bits (423), Expect = 3e-43
Identities = 81/134 (60%), Positives = 100/134 (74%), Gaps = 2/134 (1%)
Frame = +1
Query: 256 AGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHD 435
AGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+LVTHD
Sbjct: 84 AGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHD 143
Query: 436 GRTIRYPDPLIKVNDSIQLDIATTRLWTSSSLSPGT-CDDHGRRNLGRVGTSCPRET-SG 609
RTIRYPDPLIKVND+IQ+D+ T ++ G C G NLGR+G RE G
Sbjct: 144 ARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPG 203
Query: 610 SFDIVHIKDSTGHT 651
SFD+VH+KD+ G++
Sbjct: 204 SFDVVHVKDANGNS 217
Score = 149 bits (360), Expect = 1e-35
Identities = 68/82 (82%), Positives = 73/82 (89%)
Frame = +2
Query: 8 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 187
MARGPKKHLKR+ APK WMLDKL GV+AP PSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 188 VLKIVKQRLIKVDGKVRTDPTY 253
V KI QR IK+DGKVRTD TY
Sbjct: 61 VKKICMQRFIKIDGKVRTDITY 82
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 174 bits (423), Expect = 3e-43
Identities = 81/134 (60%), Positives = 100/134 (74%), Gaps = 2/134 (1%)
Frame = +1
Query: 256 AGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHD 435
AGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+LVTHD
Sbjct: 84 AGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHD 143
Query: 436 GRTIRYPDPLIKVNDSIQLDIATTRLWTSSSLSPGT-CDDHGRRNLGRVGTSCPRET-SG 609
RTIRYPDPLIKVND+IQ+D+ T ++ G C G NLGR+G RE G
Sbjct: 144 ARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPG 203
Query: 610 SFDIVHIKDSTGHT 651
SFD+VH+KD+ G++
Sbjct: 204 SFDVVHVKDANGNS 217
Score = 151 bits (365), Expect = 3e-36
Identities = 69/82 (84%), Positives = 74/82 (90%)
Frame = +2
Query: 8 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 187
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 188 VLKIVKQRLIKVDGKVRTDPTY 253
V KI QR IK+DGKVRTD TY
Sbjct: 61 VKKICMQRFIKIDGKVRTDITY 82
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 170 bits (414), Expect = 3e-42
Identities = 79/134 (58%), Positives = 99/134 (73%), Gaps = 2/134 (1%)
Frame = +1
Query: 256 AGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHD 435
AGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K +P+LVTHD
Sbjct: 84 AGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHD 143
Query: 436 GRTIRYPDPLIKVNDSIQLDIATTRLWTSSSLSPGT-CDDHGRRNLGRVGTSCPRET-SG 609
RTIRYPDP+IKVND++Q+D+ T ++ G C G NLGRVG RE G
Sbjct: 144 ARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPG 203
Query: 610 SFDIVHIKDSTGHT 651
SFD+VH+KD+ G++
Sbjct: 204 SFDVVHVKDANGNS 217
Score = 149 bits (360), Expect = 1e-35
Identities = 67/82 (81%), Positives = 73/82 (89%)
Frame = +2
Query: 8 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 187
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 188 VLKIVKQRLIKVDGKVRTDPTY 253
V KI QR IK+DGKVR D TY
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTY 82
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 170 bits (414), Expect = 3e-42
Identities = 79/134 (58%), Positives = 99/134 (73%), Gaps = 2/134 (1%)
Frame = +1
Query: 256 AGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHD 435
AGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K +P+LVTHD
Sbjct: 83 AGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHD 142
Query: 436 GRTIRYPDPLIKVNDSIQLDIATTRLWTSSSLSPGT-CDDHGRRNLGRVGTSCPRET-SG 609
RTIRYPDP+IKVND++Q+D+ T ++ G C G NLGRVG RE G
Sbjct: 143 ARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPG 202
Query: 610 SFDIVHIKDSTGHT 651
SFD+VH+KD+ G++
Sbjct: 203 SFDVVHVKDANGNS 216
Score = 146 bits (355), Expect = 5e-35
Identities = 66/81 (81%), Positives = 72/81 (88%)
Frame = +2
Query: 11 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEV 190
ARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV
Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEV 60
Query: 191 LKIVKQRLIKVDGKVRTDPTY 253
KI QR IK+DGKVR D TY
Sbjct: 61 KKICMQRFIKIDGKVRVDVTY 81
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 170 bits (414), Expect = 3e-42
Identities = 79/134 (58%), Positives = 99/134 (73%), Gaps = 2/134 (1%)
Frame = +1
Query: 256 AGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHD 435
AGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K +P+LVTHD
Sbjct: 84 AGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHD 143
Query: 436 GRTIRYPDPLIKVNDSIQLDIATTRLWTSSSLSPGT-CDDHGRRNLGRVGTSCPRET-SG 609
RTIRYPDP+IKVND++Q+D+ T ++ G C G NLGRVG RE G
Sbjct: 144 ARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPG 203
Query: 610 SFDIVHIKDSTGHT 651
SFD+VH+KD+ G++
Sbjct: 204 SFDVVHVKDANGNS 217
Score = 149 bits (360), Expect = 1e-35
Identities = 67/82 (81%), Positives = 73/82 (89%)
Frame = +2
Query: 8 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 187
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 188 VLKIVKQRLIKVDGKVRTDPTY 253
V KI QR IK+DGKVR D TY
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTY 82
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 170 bits (414), Expect = 3e-42
Identities = 79/134 (58%), Positives = 99/134 (73%), Gaps = 2/134 (1%)
Frame = +1
Query: 256 AGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHD 435
AGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K +P+LVTHD
Sbjct: 84 AGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHD 143
Query: 436 GRTIRYPDPLIKVNDSIQLDIATTRLWTSSSLSPGT-CDDHGRRNLGRVGTSCPRET-SG 609
RTIRYPDP+IKVND++Q+D+ T ++ G C G NLGRVG RE G
Sbjct: 144 ARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPG 203
Query: 610 SFDIVHIKDSTGHT 651
SFD+VH+KD+ G++
Sbjct: 204 SFDVVHVKDANGNS 217
Score = 149 bits (360), Expect = 1e-35
Identities = 67/82 (81%), Positives = 73/82 (89%)
Frame = +2
Query: 8 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 187
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 188 VLKIVKQRLIKVDGKVRTDPTY 253
V KI QR IK+DGKVR D TY
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTY 82
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 170 bits (414), Expect = 3e-42
Identities = 79/134 (58%), Positives = 99/134 (73%), Gaps = 2/134 (1%)
Frame = +1
Query: 256 AGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHD 435
AGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K +P+LVTHD
Sbjct: 84 AGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHD 143
Query: 436 GRTIRYPDPLIKVNDSIQLDIATTRLWTSSSLSPGT-CDDHGRRNLGRVGTSCPRET-SG 609
RTIRYPDP+IKVND++Q+D+ T ++ G C G NLGRVG RE G
Sbjct: 144 ARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPG 203
Query: 610 SFDIVHIKDSTGHT 651
SFD+VH+KD+ G++
Sbjct: 204 SFDVVHVKDANGNS 217
Score = 149 bits (360), Expect = 1e-35
Identities = 67/82 (81%), Positives = 73/82 (89%)
Frame = +2
Query: 8 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 187
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 188 VLKIVKQRLIKVDGKVRTDPTY 253
V KI QR IK+DGKVR D TY
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTY 82
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 167 bits (407), Expect = 2e-41
Identities = 78/134 (58%), Positives = 98/134 (73%), Gaps = 2/134 (1%)
Frame = +1
Query: 256 AGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHD 435
AGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K +P+LVTHD
Sbjct: 84 AGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVKGIPHLVTHD 143
Query: 436 GRTIRYPDPLIKVNDSIQLDIATTRLWTSSSLSPGT-CDDHGRRNLGRVGTSCPRET-SG 609
RTIRYPDP+IKVND++Q+D+ T ++ G C G NLGRVG RE G
Sbjct: 144 ARTIRYPDPVIKVNDTVQIDLGTGKIINFIKFDTGNLCMVIGGANLGRVGVITNRERHPG 203
Query: 610 SFDIVHIKDSTGHT 651
SF +VH+KD+ G++
Sbjct: 204 SFGVVHVKDANGNS 217
Score = 149 bits (360), Expect = 1e-35
Identities = 67/82 (81%), Positives = 73/82 (89%)
Frame = +2
Query: 8 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 187
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 188 VLKIVKQRLIKVDGKVRTDPTY 253
V KI QR IK+DGKVR D TY
Sbjct: 61 VKKICMQRFIKIDGKVRVDVTY 82
>AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4
protein.
Length = 263
Score = 160 bits (389), Expect = 3e-39
Identities = 75/134 (55%), Positives = 97/134 (72%), Gaps = 2/134 (1%)
Frame = +1
Query: 256 AGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHD 435
AGF+DV+SIEKT E FRL+Y+ KG F +HRIT EEAKYKLCKV+++ G K +P+LVTHD
Sbjct: 84 AGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKYKLCKVRKITVGTKGIPHLVTHD 143
Query: 436 GRTIRYPDPLIKVNDSIQLDIATTRLWTSSSLSPG-TCDDHGRRNLGRVGTSCPRET-SG 609
RTIRYPDPLIKVND++Q+D+ T ++ + G C NLGRVG RE G
Sbjct: 144 ARTIRYPDPLIKVNDTVQIDLGTGKITSFIKFDTGNVCMVIAGANLGRVGVITNRERHPG 203
Query: 610 SFDIVHIKDSTGHT 651
S D+VH+KD+ G++
Sbjct: 204 SCDVVHVKDANGNS 217
Score = 145 bits (352), Expect = 1e-34
Identities = 65/82 (79%), Positives = 72/82 (87%)
Frame = +2
Query: 8 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 187
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 188 VLKIVKQRLIKVDGKVRTDPTY 253
V KI Q +K+DGKVR D TY
Sbjct: 61 VKKICMQHFLKIDGKVRVDITY 82
>Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4
protein.
Length = 59
Score = 113 bits (271), Expect = 7e-25
Identities = 50/56 (89%), Positives = 53/56 (94%)
Frame = +2
Query: 8 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYAL 175
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYAL
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYAL 56
>AY496231-1|AAS77217.1| 281|Homo sapiens truncated
alpha-1,4-galactosyltransferase protein.
Length = 281
Score = 30.3 bits (65), Expect = 6.2
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -2
Query: 644 PVESLMCTMSK-EPDVSRGHDVPTRPKLRLP 555
P L C+ EPD GH VP RP+ R+P
Sbjct: 191 PGHGLHCSQEPAEPDQRAGHPVPLRPQRRVP 221
>AF513325-1|AAP47166.1| 275|Homo sapiens
alpha-1,4-galactosyltransferase protein.
Length = 275
Score = 30.3 bits (65), Expect = 6.2
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -2
Query: 644 PVESLMCTMSK-EPDVSRGHDVPTRPKLRLP 555
P L C+ EPD GH VP RP+ R+P
Sbjct: 185 PGHGLHCSQEPAEPDQRAGHPVPLRPQRRVP 215
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,793,654
Number of Sequences: 237096
Number of extensions: 2436502
Number of successful extensions: 14956
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 14675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14921
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -