Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1071
         (658 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9P6U4 Cluster: Putative uncharacterized protein 15E6.0...    33   4.6  
UniRef50_A6L3Y3 Cluster: Putative sugar transporter; n=1; Bacter...    33   8.0  

>UniRef50_Q9P6U4 Cluster: Putative uncharacterized protein 15E6.090;
           n=1; Neurospora crassa|Rep: Putative uncharacterized
           protein 15E6.090 - Neurospora crassa
          Length = 1042

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -2

Query: 273 FSYSCLFLQLILNNF*SKTGLSLVSPIVNTWLCKH 169
           FSY C  LQ + +N  +K+GL   + I+  W  KH
Sbjct: 5   FSYVCDLLQALDDNQRAKSGLKTTAKIIENWFAKH 39


>UniRef50_A6L3Y3 Cluster: Putative sugar transporter; n=1;
           Bacteroides vulgatus ATCC 8482|Rep: Putative sugar
           transporter - Bacteroides vulgatus (strain ATCC 8482 /
           DSM 1447 / NCTC 11154)
          Length = 388

 Score = 32.7 bits (71), Expect = 8.0
 Identities = 13/35 (37%), Positives = 23/35 (65%)
 Frame = -2

Query: 258 LFLQLILNNF*SKTGLSLVSPIVNTWLCKHYYCAY 154
           +FL L L+NF     L ++ P++  W+ +H+YC+Y
Sbjct: 19  MFL-LSLSNFLLYASLYMMLPVLPLWMVRHWYCSY 52


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,200,023
Number of Sequences: 1657284
Number of extensions: 11081567
Number of successful extensions: 23687
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23613
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)