Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1071
         (658 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    27   0.69 
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    27   0.69 
AY255856-1|AAP13482.1|  248|Anopheles gambiae glutathione transf...    24   3.7  
AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate phospho...    24   4.9  

>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 26.6 bits (56), Expect = 0.69
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -2

Query: 210 SLVSPIVNTWLCKHYYCAYC 151
           S V PIV    CKHY+C  C
Sbjct: 253 SFVDPIVTK--CKHYFCERC 270


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 26.6 bits (56), Expect = 0.69
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -2

Query: 210 SLVSPIVNTWLCKHYYCAYC 151
           S V PIV    CKHY+C  C
Sbjct: 253 SFVDPIVTK--CKHYFCERC 270


>AY255856-1|AAP13482.1|  248|Anopheles gambiae glutathione
           transferase o1 protein.
          Length = 248

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = +2

Query: 233 LFKISCRNKHEYEKKWVRQLMRWRPLL 313
           L K +  +K+E +K+   +L++WR L+
Sbjct: 188 LLKFALGDKYELDKERFGKLLQWRELM 214


>AY214334-1|AAP69612.1|  519|Anopheles gambiae nicotinate
           phosphoribosyltransferase-like protein protein.
          Length = 519

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 264 NMKKSGLGNLCAGGLYCNEHPWNLLKINV 350
           ++K+SGL N CA  L  N+  +  + I +
Sbjct: 266 DVKRSGLLNFCAVALGLNDQGYRAIGIRI 294


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,341
Number of Sequences: 2352
Number of extensions: 13439
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)