Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1070
(658 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 163 3e-39
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 151 2e-35
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 146 5e-34
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 131 1e-29
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 129 5e-29
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 128 1e-28
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 105 7e-22
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 96 8e-19
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 95 1e-18
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 84 2e-15
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 82 1e-14
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 80 5e-14
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 79 7e-14
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 76 7e-13
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 75 1e-12
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 75 2e-12
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 74 3e-12
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 74 3e-12
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 73 8e-12
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 71 2e-11
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 70 6e-11
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 68 2e-10
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 68 2e-10
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 68 2e-10
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 66 7e-10
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 66 9e-10
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 66 9e-10
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 65 1e-09
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 64 3e-09
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 63 5e-09
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 63 7e-09
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 60 6e-08
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 59 8e-08
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 59 1e-07
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 58 1e-07
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 57 4e-07
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 55 2e-06
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 53 7e-06
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 53 7e-06
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 52 9e-06
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 52 2e-05
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 51 2e-05
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 51 2e-05
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 50 4e-05
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 49 9e-05
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 49 1e-04
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 48 1e-04
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 48 2e-04
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 48 3e-04
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 47 3e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 47 3e-04
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 46 8e-04
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 46 0.001
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 45 0.001
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 45 0.001
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 44 0.002
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 44 0.004
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 44 0.004
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 43 0.006
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 43 0.007
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 43 0.007
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 41 0.023
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 41 0.023
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 38 0.21
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 38 0.28
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 38 0.28
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.28
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.37
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 37 0.37
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 37 0.49
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 37 0.49
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 36 0.86
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 36 0.86
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 36 0.86
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 36 1.1
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.5
UniRef50_A7JM26 Cluster: Predicted protein; n=1; Francisella tul... 35 2.0
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 2.0
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 2.0
UniRef50_Q4QDA2 Cluster: Putative uncharacterized protein; n=2; ... 34 2.6
UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila pseudoobscu... 34 2.6
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 34 2.6
UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1... 33 4.6
UniRef50_A6NSE6 Cluster: Putative uncharacterized protein; n=1; ... 33 4.6
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 33 4.6
UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2; Ostreoco... 33 6.0
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 6.0
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 163 bits (397), Expect = 3e-39
Identities = 80/100 (80%), Positives = 85/100 (85%)
Frame = +2
Query: 209 KNRQTREHLLVFFTNQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 388
K + E L +E EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 389 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 508
NGH+GLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNK
Sbjct: 134 NGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNK 173
Score = 102 bits (244), Expect = 9e-21
Identities = 44/53 (83%), Positives = 48/53 (90%)
Frame = +1
Query: 499 G*QVGKPHTVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQDCY 657
G ++GKPHTVPCKVTG+CGSV VRLIP PRGTGIVSAPVPKKLL MAG+ DCY
Sbjct: 171 GNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCY 223
Score = 60.1 bits (139), Expect = 5e-08
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +3
Query: 150 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKNS 263
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 151 bits (365), Expect = 2e-35
Identities = 75/100 (75%), Positives = 80/100 (80%)
Frame = +2
Query: 209 KNRQTREHLLVFFTNQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 388
K + E L +E EIIDFFLG SL DEVLKIMPVQKQT AGQ TRFKAFV IGD
Sbjct: 14 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDY 73
Query: 389 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 508
NGH+GL VKCSKEVATAIRGAIILAKLS++PV RGYWGNK
Sbjct: 74 NGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGYWGNK 113
Score = 52.0 bits (119), Expect = 1e-05
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +1
Query: 499 G*QVGKPHTVPCKVTGKCGSVTVRLIPDP 585
G ++GKPHTVPCKVTG+C SV V LIP P
Sbjct: 111 GNKIGKPHTVPCKVTGRCSSVLVHLIPAP 139
Score = 46.0 bits (104), Expect = 8e-04
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +3
Query: 171 VPVTKLGRLVREGKIDKLESIYLFSLPIKNS 263
+PVTKLG L+ + KI LE IYLFSLPIK S
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKES 31
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 146 bits (353), Expect = 5e-34
Identities = 65/98 (66%), Positives = 83/98 (84%)
Frame = +2
Query: 209 KNRQTREHLLVFFTNQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 388
K + E L +E++I+D+FL P LNDEV+K++PVQKQTRAGQRTRFKAFV IGD+
Sbjct: 48 KIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDS 106
Query: 389 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG 502
+GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRGYWG
Sbjct: 107 DGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWG 144
Score = 87.4 bits (207), Expect = 3e-16
Identities = 36/53 (67%), Positives = 45/53 (84%)
Frame = +1
Query: 499 G*QVGKPHTVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQDCY 657
G +G PHTVP KV+GKCGSVTVRL+P PRG G+V+APV K+ LQ+AG++DCY
Sbjct: 144 GTALGDPHTVPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQLAGIEDCY 196
Score = 60.9 bits (141), Expect = 3e-08
Identities = 25/36 (69%), Positives = 32/36 (88%)
Frame = +3
Query: 150 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 257
++++KEWVPVTKLGRLV+ GKI +E IYL+SLPIK
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIK 63
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 131 bits (317), Expect = 1e-29
Identities = 63/101 (62%), Positives = 80/101 (79%), Gaps = 2/101 (1%)
Frame = +2
Query: 227 EHLLVF-FTNQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 403
EH+ +F +E +I++ F+G L DEV+KI PVQKQT AGQR RFKAFV +GD NGHIG
Sbjct: 69 EHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIG 128
Query: 404 LGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK-*ESHT 523
LGVK KEVA +I+G++ILAKL+++PVRRGYWG+K E HT
Sbjct: 129 LGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKLGEPHT 169
Score = 73.7 bits (173), Expect = 3e-12
Identities = 33/53 (62%), Positives = 41/53 (77%)
Frame = +1
Query: 499 G*QVGKPHTVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQDCY 657
G ++G+PHT+P KV GKCGSV VRLIP PRG GIV++ KK+L MAG+ D Y
Sbjct: 161 GSKLGEPHTIPTKVHGKCGSVHVRLIPAPRGAGIVASGTVKKVLAMAGLHDVY 213
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = +3
Query: 153 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 257
+D+ WVP TKLGRLV++GKI LE I+LFSLPIK
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIK 79
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 129 bits (312), Expect = 5e-29
Identities = 61/70 (87%), Positives = 65/70 (92%)
Frame = +2
Query: 299 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 478
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 479 PVRRGYWGNK 508
P+R+GYWGNK
Sbjct: 108 PLRQGYWGNK 117
Score = 93.9 bits (223), Expect = 3e-18
Identities = 41/53 (77%), Positives = 46/53 (86%)
Frame = +1
Query: 499 G*QVGKPHTVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQDCY 657
G ++GKP+TVPCKVTG CGSV V LIP PRGTG+VSAPVPKKLL MAG+ DCY
Sbjct: 115 GNKIGKPNTVPCKVTGHCGSVLVCLIPAPRGTGMVSAPVPKKLLMMAGIDDCY 167
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 128 bits (309), Expect = 1e-28
Identities = 59/83 (71%), Positives = 70/83 (84%)
Frame = +2
Query: 254 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 433
+EF+IID L P L DEV+ I PVQKQTRAGQRTRFKA V +GD+NGH+GLG+K +KEVA
Sbjct: 64 KEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVA 122
Query: 434 TAIRGAIILAKLSVLPVRRGYWG 502
AIR II+AKLSV+P+RRGYWG
Sbjct: 123 GAIRAGIIIAKLSVIPIRRGYWG 145
Score = 80.2 bits (189), Expect = 4e-14
Identities = 35/53 (66%), Positives = 44/53 (83%)
Frame = +1
Query: 499 G*QVGKPHTVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQDCY 657
G +G+PH++ K TGKCGSVTVRLIP PRG+GIV++P KKLLQ+AGV+D Y
Sbjct: 145 GTNLGQPHSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVEDVY 197
Score = 52.4 bits (120), Expect = 9e-06
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +3
Query: 156 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 257
++K WVPVTKLGRLV+ GKI +E I+L SLP+K
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVK 64
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 105 bits (253), Expect = 7e-22
Identities = 52/93 (55%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Frame = +2
Query: 254 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 433
+E EI+D G S+ +EVL I VQKQTRAGQ+TR KA V +GD GH+G+G K SKE A
Sbjct: 50 REPEIVDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAA 109
Query: 434 TAIRGAIILAKLSVLPVRRGYW-GNK*ESHTPS 529
+AIRGAI AK ++ PVR G W G + + HT S
Sbjct: 110 SAIRGAIARAKCAIRPVRLGLWDGAQGKPHTVS 142
Score = 72.1 bits (169), Expect = 1e-11
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = +1
Query: 511 GKPHTVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQDCY 657
GKPHTV CK +GKCG+ V++IP PRGTGI+S V KK+ ++AG++D Y
Sbjct: 136 GKPHTVSCKGSGKCGTSVVQVIPAPRGTGIISGSVNKKIFELAGIKDLY 184
Score = 37.9 bits (84), Expect = 0.21
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +3
Query: 150 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 257
++++ EW+P T +GRLV+ KI LE I+ FS I+
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIR 50
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 95.9 bits (228), Expect = 8e-19
Identities = 48/66 (72%), Positives = 51/66 (77%)
Frame = +2
Query: 209 KNRQTREHLLVFFTNQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 388
K + E L +E EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 49 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 108
Query: 389 NGHIGL 406
NGH+GL
Sbjct: 109 NGHVGL 114
Score = 60.9 bits (141), Expect = 3e-08
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +3
Query: 150 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKNS 263
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK S
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 66
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 95.1 bits (226), Expect = 1e-18
Identities = 42/53 (79%), Positives = 48/53 (90%)
Frame = +2
Query: 350 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 508
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNE 113
Score = 94.7 bits (225), Expect = 2e-18
Identities = 42/58 (72%), Positives = 47/58 (81%)
Frame = +1
Query: 484 PKRLLG*QVGKPHTVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQDCY 657
P+ G ++ KPHTVP KVTG+CGSV VRLIP PRGTG VSAPVPKKLL MAG+ DCY
Sbjct: 106 PRGYWGNEIRKPHTVPGKVTGRCGSVLVRLIPAPRGTGFVSAPVPKKLLMMAGIDDCY 163
Score = 33.5 bits (73), Expect = 4.6
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 156 DQKEWVPVTKLGRLVREGKI 215
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 84.2 bits (199), Expect = 2e-15
Identities = 43/65 (66%), Positives = 48/65 (73%)
Frame = +2
Query: 209 KNRQTREHLLVFFTNQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 388
K + E L +E EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 389 NGHIG 403
NG+ G
Sbjct: 62 NGYAG 66
Score = 41.1 bits (92), Expect = 0.023
Identities = 42/155 (27%), Positives = 69/155 (44%), Gaps = 6/155 (3%)
Frame = +3
Query: 210 KIDKLESIYLFSLPIKNSRSL---ISSSARP*MMRFL--RSCLYRNKHVPDSAHVS-RHL 371
KI LE IYLFSLPIK S + + +S + +++ + R + A V+ R
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 372 LPLATTTVILVWV*SAARKSPLPFEALLSLLSCQFYQSEEVTGVTSRKATHRPLQGHRQV 551
A +L R+ P +L C ++++ + G R+A HRPLQG R +
Sbjct: 62 NGYAGRVEVLQ---GGGRRHPRGHHPDQAL-HC--HRAQRLLGEQDRQAPHRPLQGDRPL 115
Query: 552 WFRNSPADS*SSWYWYCVCASS*EASSDGWCTGLL 656
+ +W+ + + + EA+ D W LL
Sbjct: 116 RLCAGALHPRAQGHWHRLSSCAQEAAHDSWYLRLL 150
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 81.8 bits (193), Expect = 1e-14
Identities = 45/96 (46%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Frame = -1
Query: 529 GRCVAFL-LVTPVTSSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETC 353
G V F LVTPV S+ N QL +D+S ++G G FLAAL QT++ V V +G++ LE
Sbjct: 21 GHGVGFTDLVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLEAR 80
Query: 352 ALSGTCLFLYRHDLKNLIIQGRAEEEINDLEFLIGK 245
L+GT L L HDL++ ++Q A+EEI+DLE G+
Sbjct: 81 TLTGTGLLLDGHDLQHFVLQRAAQEEIDDLELFNGQ 116
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 79.8 bits (188), Expect = 5e-14
Identities = 38/59 (64%), Positives = 43/59 (72%)
Frame = +1
Query: 481 SPKRLLG*QVGKPHTVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQDCY 657
S ++ LG ++GK H V CKVTG CGSV V LIP RGTGI SAPVP K L MAG+ DCY
Sbjct: 1 SVEKPLGNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAGIDDCY 59
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 79.4 bits (187), Expect = 7e-14
Identities = 35/41 (85%), Positives = 37/41 (90%)
Frame = +1
Query: 535 KVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQDCY 657
KVTG+CGSV VRLIP PRGTGIVSAPVPKKLL MAG+ DCY
Sbjct: 125 KVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCY 165
Score = 69.7 bits (163), Expect = 6e-11
Identities = 36/52 (69%), Positives = 38/52 (73%)
Frame = +2
Query: 209 KNRQTREHLLVFFTNQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 364
K + E L +E EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
Score = 60.9 bits (141), Expect = 3e-08
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +3
Query: 150 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKNS 263
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK S
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 76.2 bits (179), Expect = 7e-13
Identities = 40/83 (48%), Positives = 59/83 (71%)
Frame = -1
Query: 502 TPVTSSDW*N*QLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLY 323
TPVTSSDW N QL D++ S+G+ +FL+ L+TQT++TV V N + LE+ +L+ + L L
Sbjct: 112 TPVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLD 171
Query: 322 RHDLKNLIIQGRAEEEINDLEFL 254
R D+ N I+Q ++ +NDLEFL
Sbjct: 172 RLDVHNFILQ-VWQQLVNDLEFL 193
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 75.4 bits (177), Expect = 1e-12
Identities = 37/64 (57%), Positives = 50/64 (78%)
Frame = +2
Query: 254 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 433
+E++I+D FL +L +E L I PVQKQT AGQ+TRFKA+V +GD++ HIGLG K +KEV
Sbjct: 93 KEYQIVDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQ 151
Query: 434 TAIR 445
AI+
Sbjct: 152 GAIQ 155
Score = 63.7 bits (148), Expect = 4e-09
Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 7/173 (4%)
Frame = +3
Query: 159 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKN----SRSLISSSARP*MMRFLRSCLY 326
++EWVP+TKLGRLV+ GKI LE+I+ FS+PIK L + P + ++
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFLKTLKEEPLAIGPVQKQTC 120
Query: 327 RNKHVPDSAHVSRHLLPLATTTVILVWV*SAARKSPLPFEALLSLLSC--QFYQSEE-VT 497
+ A+V ++ + + L W +A++ + L +L C QF S++ +
Sbjct: 121 AGQKTRFKAYV---VVGDSHQHIGLGW--KSAKEVQGAIQELCNLNQCQTQFDSSQKRIL 175
Query: 498 GVTSRKATHRPLQGHRQVWFRNSPADS*SSWYWYCVCASS*EASSDGWCTGLL 656
G R TH P+Q R+ S S + YWY E ++GW LL
Sbjct: 176 GKQDRLTTHSPMQSDRKGRISQSQIGSSTQRYWYSCSHHIQEGLTNGWYPRLL 228
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 74.9 bits (176), Expect = 2e-12
Identities = 45/85 (52%), Positives = 55/85 (64%)
Frame = +2
Query: 254 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 433
+E EIID FLG +L DEVLK +P QK TR GQ +KA GD NGH+ G+ EVA
Sbjct: 77 KETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ--YYKA----GDYNGHVITGL---DEVA 127
Query: 434 TAIRGAIILAKLSVLPVRRGYWGNK 508
I+ IIL KL ++PV RGY G+K
Sbjct: 128 NTIQRVIILTKLPIVPVWRGYCGSK 152
Score = 70.9 bits (166), Expect = 2e-11
Identities = 34/53 (64%), Positives = 40/53 (75%)
Frame = +1
Query: 499 G*QVGKPHTVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQDCY 657
G + KPHTV CKVTG GSV++ LIP PR T I SAP+PKKLL MAG+ DC+
Sbjct: 150 GSKTSKPHTVLCKVTGH-GSVSLHLIPAPRDTVISSAPMPKKLLMMAGINDCH 201
Score = 33.5 bits (73), Expect = 4.6
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +3
Query: 174 PVTKLGRLVREGKIDKLESIYLFSLPIKNS 263
P +KLG LV++ +I L IYLFSLPIK +
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKET 79
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 74.1 bits (174), Expect = 3e-12
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = +1
Query: 514 KPHTVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQD 651
+PH VPC+VTG+CGS+ V LIP PRGTG VSAPVP KLL MAG+ D
Sbjct: 152 EPHMVPCRVTGRCGSLLVHLIPAPRGTGTVSAPVP-KLLMMAGIDD 196
Score = 56.4 bits (130), Expect = 6e-07
Identities = 33/67 (49%), Positives = 42/67 (62%)
Frame = +2
Query: 320 PVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 499
P+ KQT Q+TRFKA V +G + GH+ LG+K S EVA IILAKLS++PV
Sbjct: 95 PLIKQTCTDQQTRFKASVTVG-SYGHVSLGIKYSMEVA------IILAKLSIIPVETATG 147
Query: 500 GNK*ESH 520
G + E H
Sbjct: 148 GKRLEPH 154
Score = 49.6 bits (113), Expect = 6e-05
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = +3
Query: 159 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKNSRSLISSSARP 293
+ +W+P+TKLG LV+E KI LE IY FSL +N RSL S P
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHP 95
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 73.7 bits (173), Expect = 3e-12
Identities = 35/80 (43%), Positives = 55/80 (68%)
Frame = +2
Query: 254 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 433
+E EI+D L P L+D+VL + +Q+ T +G+R RF +G+++G++GL + KEVA
Sbjct: 21 REVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGLAICKGKEVA 79
Query: 434 TAIRGAIILAKLSVLPVRRG 493
+ IR AI AKL+++PV RG
Sbjct: 80 STIRKAIDKAKLNMIPVMRG 99
Score = 45.6 bits (103), Expect = 0.001
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +1
Query: 511 GKPHT-VPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQDCY 657
G P T VP K+TG+ GS V L+P P G G+V + +++L +AGV D +
Sbjct: 107 GGPGTSVPLKITGRSGSTRVTLMPAPAGKGLVVSDYGRRVLTLAGVTDVW 156
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 72.5 bits (170), Expect = 8e-12
Identities = 37/79 (46%), Positives = 55/79 (69%)
Frame = +2
Query: 257 EFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVAT 436
E EI+D L P L ++VL + VQ+ ++G+R R++A V +G+ NG++G+G+ SKEV
Sbjct: 46 EPEIVDALL-PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGP 104
Query: 437 AIRGAIILAKLSVLPVRRG 493
AIR AI AKLS++ VR G
Sbjct: 105 AIRKAIAHAKLSLIKVRVG 123
Score = 58.0 bits (134), Expect = 2e-07
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +1
Query: 511 GKPHTVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQDCY 657
G PH++P G CGSV V L+P PRG G+V+ V K +L +AGV+D +
Sbjct: 132 GSPHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVLGLAGVKDAW 180
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 70.9 bits (166), Expect = 2e-11
Identities = 32/87 (36%), Positives = 56/87 (64%)
Frame = +2
Query: 239 VFFTNQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKC 418
+FF N + +++ G SL +V++ + V + T++G++ + K V +GD +GH+GLGVK
Sbjct: 92 IFFHNNK--LVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKS 149
Query: 419 SKEVATAIRGAIILAKLSVLPVRRGYW 499
S + I+ A+ AKL++ +RRGYW
Sbjct: 150 SMDSKAGIKAALRKAKLAITKIRRGYW 176
Score = 55.2 bits (127), Expect = 1e-06
Identities = 22/49 (44%), Positives = 36/49 (73%)
Frame = +1
Query: 511 GKPHTVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQDCY 657
GKP+T+ K +GK GSV V + P P+GTGIV++ +L+++G++DC+
Sbjct: 181 GKPNTIKYKTSGKAGSVVVCIKPAPKGTGIVASKFQLNVLKISGIRDCF 229
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 69.7 bits (163), Expect = 6e-11
Identities = 35/74 (47%), Positives = 49/74 (66%)
Frame = +2
Query: 254 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 433
+EFE+ DF LG L D+VLK+M VQKQ +AG+R RFK V I D N ++ LGV+ KE+
Sbjct: 150 KEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKELL 209
Query: 434 TAIRGAIILAKLSV 475
A+ +L+ + V
Sbjct: 210 IAVCRTNVLSIILV 223
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 67.7 bits (158), Expect = 2e-10
Identities = 32/41 (78%), Positives = 34/41 (82%)
Frame = +1
Query: 535 KVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQDCY 657
KVTG+CGSV VRL PRGTGIVSAPVPKKLL MA + DCY
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSAPVPKKLLMMA-IDDCY 164
Score = 60.5 bits (140), Expect = 3e-08
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = +2
Query: 263 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 364
EIIDFFLG SL +EVLK MPVQKQTRAGQ TRFK
Sbjct: 92 EIIDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
Score = 56.8 bits (131), Expect = 4e-07
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +3
Query: 150 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKNS 263
K + KEW+P TKLG LV++ KI LE IYLFSLPIK S
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGS 91
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 67.7 bits (158), Expect = 2e-10
Identities = 35/79 (44%), Positives = 54/79 (68%)
Frame = +2
Query: 257 EFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVAT 436
E EI+D L P L EV+ I VQKQT AG+ +R+K V +G+ +G++ +G +K++
Sbjct: 43 EPEIVDVLL-PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKAKQLRV 101
Query: 437 AIRGAIILAKLSVLPVRRG 493
AI+ AI AK++++PVRRG
Sbjct: 102 AIQKAIRDAKMNIIPVRRG 120
Score = 59.3 bits (137), Expect = 8e-08
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +1
Query: 511 GKPHTVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQDCY 657
G+PH++P KV GK GSV V L+P P+GTG+V V K LL AG++D +
Sbjct: 129 GEPHSLPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLTYAGIKDAW 177
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +3
Query: 162 KEWVPVTKLGRLVREGKIDKLESIYLFSLPI 254
+EW P T +G LV+EGKI ++ ++ +LPI
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPI 41
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 67.7 bits (158), Expect = 2e-10
Identities = 30/80 (37%), Positives = 53/80 (66%)
Frame = +2
Query: 254 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 433
+E++I+D+ + P L DEV+ I Q+ T +G+R + +G+ NG++G+G +KE A
Sbjct: 34 KEYQIVDYLI-PDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVGRGKAKEAA 92
Query: 434 TAIRGAIILAKLSVLPVRRG 493
AI+ AI AKL+++ ++RG
Sbjct: 93 PAIKKAIDNAKLNIIEIKRG 112
Score = 56.4 bits (130), Expect = 6e-07
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +1
Query: 511 GKPHTVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQDCY 657
GKPHT+P V GK GSV+V L P P+G G+ V K +L+MAG+ D +
Sbjct: 121 GKPHTLPFLVNGKSGSVSVTLKPAPQGVGLAVGDVVKVILRMAGIDDAW 169
Score = 32.7 bits (71), Expect = 8.0
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 162 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 257
+EW P T+LGRLV G+I + LP+K
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLK 34
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 66.1 bits (154), Expect = 7e-10
Identities = 46/101 (45%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
Frame = +2
Query: 254 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 433
+EFEI DFFL SL D+VLKI+P+ + R Q TRF +F I + GH G+GVKCSK+V
Sbjct: 21 KEFEINDFFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGVKCSKKVG 78
Query: 434 TAIRGAIILAKL-SVLPVRRGYWGNK*ESHTPSLARSPASV 553
TA+ + + L S LP R Y GN T R+ S+
Sbjct: 79 TAVGLSSWSSFLSSCLP--RDYCGNNIRKPTYPCKRTGWSI 117
Score = 35.9 bits (79), Expect = 0.86
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +1
Query: 469 VSSTSPKRLLG*QVGKPHTVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQ 648
+SS P+ G + KP T PCK TG S++ L P+ IVS VP+KL+ A +
Sbjct: 90 LSSCLPRDYCGNNIRKP-TYPCKRTG--WSISF-LFPETLAF-IVSVLVPRKLMLRASID 144
Query: 649 DCY 657
CY
Sbjct: 145 SCY 147
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 65.7 bits (153), Expect = 9e-10
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = +2
Query: 326 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 469
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQL 48
Score = 56.4 bits (130), Expect = 6e-07
Identities = 28/44 (63%), Positives = 30/44 (68%)
Frame = +1
Query: 526 VPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQDCY 657
V KVT GSV V LIP PRGTGIVSAPV K L AG+ +CY
Sbjct: 59 VQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKFLMNAGIYNCY 102
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 65.7 bits (153), Expect = 9e-10
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Frame = +2
Query: 254 QEFEIIDFFLGPSLN----DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCS 421
+E EIID L P +N EVL I + T +G+R RF+ A+G+ +G++GLG+
Sbjct: 45 KEPEIIDVLL-PEVNARENQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGHG 103
Query: 422 KEVATAIRGAIILAKLSVLPVRRG 493
KEV AIR AI AKL+++ ++RG
Sbjct: 104 KEVGIAIRKAINYAKLNIIEIKRG 127
Score = 62.5 bits (145), Expect = 9e-09
Identities = 29/48 (60%), Positives = 36/48 (75%)
Frame = +1
Query: 514 KPHTVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQDCY 657
+PH+VP V GK GSV VRLIP PRG G+V V KK+L++AGVQD +
Sbjct: 137 RPHSVPFAVEGKEGSVRVRLIPGPRGLGLVIGDVGKKILRLAGVQDVW 184
Score = 32.7 bits (71), Expect = 8.0
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 165 EWVPVTKLGRLVREGKIDKLESIYLFSLPIK 257
EW P TKLG +V+EG+I + I+ IK
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIK 45
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 65.3 bits (152), Expect = 1e-09
Identities = 34/80 (42%), Positives = 52/80 (65%)
Frame = +2
Query: 254 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 433
+E EI+D L P L DEVL I VQ+ T +G+R +F+ VA+G+ +G++G +V
Sbjct: 87 KEAEIVDQLL-PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDDQVG 145
Query: 434 TAIRGAIILAKLSVLPVRRG 493
AI+ AI +AKL+++ V RG
Sbjct: 146 GAIQKAIDVAKLNIIEVDRG 165
Score = 46.8 bits (106), Expect = 5e-04
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +1
Query: 505 QVGKPHTVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQDCY 657
Q G +++ K GK GSVTV + P P+G G+ +A + +L++AGV+D +
Sbjct: 172 QPGGTNSLTRKAEGKAGSVTVEIQPAPQGLGLAAAETVRNILELAGVEDAW 222
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 64.1 bits (149), Expect = 3e-09
Identities = 37/79 (46%), Positives = 49/79 (62%)
Frame = +2
Query: 272 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 451
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 452 IILAKLSVLPVRRGYWGNK 508
IIL + S+ G+ GNK
Sbjct: 55 IILDRSSIAIAWGGWSGNK 73
Score = 62.1 bits (144), Expect = 1e-08
Identities = 30/51 (58%), Positives = 36/51 (70%)
Frame = +1
Query: 499 G*QVGKPHTVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQD 651
G ++ KPHTV C+VT SV V I PRGT I+SAPVPKKLL+MA + D
Sbjct: 71 GNKIAKPHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVPKKLLRMASIDD 121
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 63.3 bits (147), Expect = 5e-09
Identities = 36/80 (45%), Positives = 48/80 (60%)
Frame = +2
Query: 254 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 433
QE II L P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G SK++
Sbjct: 75 QEAGIIKKLL-PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIGQGKSKQMR 133
Query: 434 TAIRGAIILAKLSVLPVRRG 493
AI A A L+V P++ G
Sbjct: 134 IAIEKATNAAYLNVNPIKMG 153
Score = 56.0 bits (129), Expect = 7e-07
Identities = 24/46 (52%), Positives = 35/46 (76%)
Frame = +1
Query: 520 HTVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQDCY 657
H+VP KV GK GSVT+ +IP PRG G+V+ K+LL++AG++D +
Sbjct: 165 HSVPFKVKGKGGSVTIEIIPAPRGLGLVAGGKIKRLLELAGLKDAW 210
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 62.9 bits (146), Expect = 7e-09
Identities = 33/80 (41%), Positives = 51/80 (63%)
Frame = +2
Query: 254 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 433
+E E++D + P L DEVL I VQ+ T +G+R +F+ VA+G+ +G IG +V
Sbjct: 36 KESEVVDQLV-PDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGYAEGRDDQVG 94
Query: 434 TAIRGAIILAKLSVLPVRRG 493
AI+ AI +AKL+++ V RG
Sbjct: 95 GAIQKAIDIAKLNIIDVSRG 114
Score = 54.4 bits (125), Expect = 2e-06
Identities = 22/49 (44%), Positives = 32/49 (65%)
Frame = +1
Query: 511 GKPHTVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQDCY 657
G+PHTV + GK GSV V L P PRG G+ +K+L++AG++D +
Sbjct: 123 GRPHTVALRTEGKAGSVEVELQPAPRGLGLAGGETVRKVLELAGIEDIW 171
Score = 33.1 bits (72), Expect = 6.0
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 168 WVPVTKLGRLVREGKIDKLESIYLFSLPIKNS 263
W P T+LG+ V EG+ID ++ LP+K S
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKES 38
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 59.7 bits (138), Expect = 6e-08
Identities = 35/80 (43%), Positives = 48/80 (60%)
Frame = +2
Query: 254 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 433
QE II L P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G +K++
Sbjct: 56 QESGIIKKLL-PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMR 114
Query: 434 TAIRGAIILAKLSVLPVRRG 493
AI A A L+V P++ G
Sbjct: 115 IAIEKANNQALLNVGPIKLG 134
Score = 54.0 bits (124), Expect = 3e-06
Identities = 22/46 (47%), Positives = 34/46 (73%)
Frame = +1
Query: 520 HTVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQDCY 657
H+VP KV GK GSV + ++P PRG G+V+ ++LL++AG++D Y
Sbjct: 146 HSVPFKVRGKGGSVVIEILPAPRGLGLVAGGKIRRLLELAGLKDAY 191
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 59.3 bits (137), Expect = 8e-08
Identities = 32/69 (46%), Positives = 43/69 (62%)
Frame = +2
Query: 254 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVA 433
+EFE+ DF L L D+VLK+M V+KQ AG+ RFK V I N ++ LGV+ KE+
Sbjct: 16 KEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVERPKELL 75
Query: 434 TAIRGAIIL 460
A+ IIL
Sbjct: 76 IAVCRTIIL 84
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/45 (62%), Positives = 33/45 (73%)
Frame = +1
Query: 523 TVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQDCY 657
TV CKVTG+C SV + LIP R I+SAPVPKKLL +A + DCY
Sbjct: 162 TVSCKVTGQCVSVLICLIPPTRN--IISAPVPKKLLLLANIDDCY 204
Score = 55.2 bits (127), Expect = 1e-06
Identities = 34/64 (53%), Positives = 40/64 (62%)
Frame = +2
Query: 251 NQEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 430
N++ II FFL SL DE IMPVQ QT R FK FV+I D + H+ L KCSK+
Sbjct: 87 NKKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKT 142
Query: 431 ATAI 442
ATAI
Sbjct: 143 ATAI 146
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 58.4 bits (135), Expect = 1e-07
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +3
Query: 150 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 257
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 56.8 bits (131), Expect = 4e-07
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Frame = +2
Query: 284 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 463
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 464 KLSVL--PVRRGY 496
K + + P+ + Y
Sbjct: 128 KKTAITVPITKDY 140
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = +1
Query: 577 PDPRGTGIVSAPVPKKLLQMAGVQDCY 657
P PRGTGIVSAPVPKKLL MAG+ DCY
Sbjct: 1 PAPRGTGIVSAPVPKKLLMMAGIDDCY 27
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 52.8 bits (121), Expect = 7e-06
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +2
Query: 293 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 472
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 473 VLPV 484
++ V
Sbjct: 72 LISV 75
Score = 36.7 bits (81), Expect = 0.49
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +1
Query: 523 TVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQD 651
T+P ++ G+ GS V + P GTG++S + +L++AGV D
Sbjct: 81 TIPHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGVGD 123
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 52.8 bits (121), Expect = 7e-06
Identities = 23/49 (46%), Positives = 34/49 (69%)
Frame = +1
Query: 511 GKPHTVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQDCY 657
G PH++P +V GK GSV V L P P+G GIV+ KK+ ++AG++D +
Sbjct: 136 GAPHSIPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFRLAGIKDVW 184
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/56 (39%), Positives = 36/56 (64%)
Frame = +2
Query: 326 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRG 493
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++ V RG
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARG 127
Score = 37.1 bits (82), Expect = 0.37
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +3
Query: 162 KEWVPVTKLGRLVREGKIDKLESI 233
+EW P TKLGRLV+EGKI ++ I
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEI 28
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 52.4 bits (120), Expect = 9e-06
Identities = 36/82 (43%), Positives = 44/82 (53%)
Frame = +2
Query: 263 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 442
+II+FFLG L DEVL+ M Q QRTR K F + + L V CSKEV TA
Sbjct: 51 DIIEFFLGEHLKDEVLRTMLAQ-----NQRTRIKVFFFLTIRSPMTTL-VNCSKEVGTAA 104
Query: 443 RGAIILAKLSVLPVRRGYWGNK 508
+ AI L + + GY GNK
Sbjct: 105 QRAITLLSF-LFSTQTGYKGNK 125
Score = 50.8 bits (116), Expect = 3e-05
Identities = 26/50 (52%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +1
Query: 499 G*QVGKPHTVPCKVTG-KCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGV 645
G ++G PHT+PC VT + V V L PRGTG VSA VPKKL +A +
Sbjct: 123 GNKIGNPHTIPCDVTATEKNLVLVCLTTAPRGTGTVSASVPKKLPLLASI 172
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +2
Query: 290 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 469
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 470 SVLPVRR 490
+++ V++
Sbjct: 108 NLIKVKQ 114
Score = 37.1 bits (82), Expect = 0.37
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +1
Query: 538 VTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQDCY 657
V G+ G+ V L+P P GTGI++ + ++++AG D Y
Sbjct: 124 VNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFTDIY 163
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/71 (33%), Positives = 43/71 (60%)
Frame = +2
Query: 272 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 451
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 452 IILAKLSVLPV 484
++ AK SV+ V
Sbjct: 566 LVDAKKSVVRV 576
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 51.2 bits (117), Expect = 2e-05
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = +2
Query: 254 QEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 406
+E++I+D L L +EV+ I VQKQT G+ R KA VAIGD+NGH L
Sbjct: 63 KEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
Score = 38.3 bits (85), Expect = 0.16
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +3
Query: 174 PVTKLGRLVREGKIDKLESIYLFSLPIK 257
PVTKLGRLV++GK+ ++ I+ F + IK
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIK 63
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = +2
Query: 287 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 466
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 467 LSVLPV 484
++ +
Sbjct: 73 KQLVRI 78
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 49.2 bits (112), Expect = 9e-05
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +2
Query: 293 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 472
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 473 VLPVR 487
+ V+
Sbjct: 138 MYKVK 142
Score = 36.7 bits (81), Expect = 0.49
Identities = 17/51 (33%), Positives = 31/51 (60%)
Frame = +1
Query: 505 QVGKPHTVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQDCY 657
++ K T+ +V GK G+ V + P P+GTG+++ K +L++ G +D Y
Sbjct: 142 KMNKNFTLYHEVIGKHGAGKVLIKPAPKGTGVIAGGPIKVVLELCGFKDVY 192
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +2
Query: 299 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 478
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 479 PV 484
+
Sbjct: 71 KI 72
Score = 41.5 bits (93), Expect = 0.017
Identities = 15/46 (32%), Positives = 30/46 (65%)
Frame = +1
Query: 514 KPHTVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQD 651
K +T+P ++ GK G+ T+ + P GTG+++ +++L++ GV D
Sbjct: 75 KNNTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGVHD 120
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +2
Query: 299 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 478
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK +++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 479 PV 484
V
Sbjct: 77 EV 78
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +2
Query: 278 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 457
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 458 LAKLSVLPV 484
AK +++ V
Sbjct: 98 EAKKNLIRV 106
Score = 35.1 bits (77), Expect = 1.5
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +1
Query: 523 TVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQDCY 657
TVP +V G G+ V + P GTG+++ + ++++AG+ D Y
Sbjct: 112 TVPHEVIGHFGAGQVLIKPAKPGTGVIAGGPARAVIELAGIADVY 156
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +2
Query: 299 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 478
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 479 --PVRRG 493
PV G
Sbjct: 79 TVPVENG 85
Score = 34.7 bits (76), Expect = 2.0
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +1
Query: 523 TVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGV 645
T+P ++ G+ + V L P GTG+++ VP+ + ++AG+
Sbjct: 86 TIPHEIVGENSTSRVLLKPAGPGTGVIAGTVPRSIAELAGI 126
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 47.2 bits (107), Expect = 3e-04
Identities = 23/46 (50%), Positives = 30/46 (65%)
Frame = -3
Query: 653 QSCTPAI*RSFLGTGADTIPVPRGSGISRTVTEPHLPVTLQGTVCG 516
QS P+ FLGT A+ +PVP G+G+ T TEP P+TL G +CG
Sbjct: 26 QSSIPSSSSHFLGTEAEVMPVPMGAGMKSTRTEPQWPITLCG-LCG 70
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 47.2 bits (107), Expect = 3e-04
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +2
Query: 299 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 478
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 479 PV 484
V
Sbjct: 209 QV 210
Score = 32.7 bits (71), Expect = 8.0
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 514 KPHTVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQD 651
K T P + G G+ V L P GTG+++ + +L+MAGV++
Sbjct: 214 KYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVEN 259
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.0 bits (104), Expect = 8e-04
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +2
Query: 299 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 451
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/62 (30%), Positives = 38/62 (61%)
Frame = +2
Query: 299 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 478
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 479 PV 484
V
Sbjct: 246 TV 247
Score = 33.5 bits (73), Expect = 4.6
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 472 SSTSPKR-LLG*QVGKPHTVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQ 648
S+T+ +R ++ + K T P + G G+ V L P GTG+++ + +L+MAGV+
Sbjct: 236 SATNARRNIITVPMTKYLTFPHRADGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVE 295
Query: 649 D 651
+
Sbjct: 296 N 296
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 45.2 bits (102), Expect = 0.001
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 284 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 463
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 464 KLSVL--PVRRG 493
K +++ P+R G
Sbjct: 116 KKTMIRVPLREG 127
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 45.2 bits (102), Expect = 0.001
Identities = 26/69 (37%), Positives = 35/69 (50%)
Frame = +2
Query: 284 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 463
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 464 KLSVLPVRR 490
K + V R
Sbjct: 102 KKHMFSVPR 110
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +2
Query: 299 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 472
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 473 VLPVRRG 493
+P+R G
Sbjct: 84 FVPLRGG 90
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 43.6 bits (98), Expect = 0.004
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +2
Query: 296 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 475
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 476 LPV 484
+ +
Sbjct: 91 VKI 93
Score = 41.9 bits (94), Expect = 0.013
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +1
Query: 514 KPHTVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQD 651
K HT+P +V GK S V L P GTGI++ + +++ AG+QD
Sbjct: 96 KGHTIPHEVIGKFKSARVILKPSTAGTGIIAGASVRSIVEKAGIQD 141
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 43.6 bits (98), Expect = 0.004
Identities = 18/62 (29%), Positives = 38/62 (61%)
Frame = +2
Query: 299 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 478
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 479 PV 484
V
Sbjct: 128 RV 129
Score = 35.9 bits (79), Expect = 0.86
Identities = 16/59 (27%), Positives = 35/59 (59%)
Frame = +1
Query: 475 STSPKRLLG*QVGKPHTVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQD 651
S + K L+ + K +++P ++G G+ V L P GTG+++ + +L++AG+++
Sbjct: 120 SDARKALIRVPLNKINSIPHPMSGSSGAANVFLKPASGGTGVIAGGAVRTVLELAGIKN 178
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 43.2 bits (97), Expect = 0.006
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +2
Query: 293 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 472
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 473 VLPV 484
V+ V
Sbjct: 88 VIRV 91
Score = 36.3 bits (80), Expect = 0.65
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 523 TVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQD 651
TVP V G G+ + ++P RGTG+V+ K + ++AG D
Sbjct: 97 TVPHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGYTD 139
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 42.7 bits (96), Expect = 0.007
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +3
Query: 168 WVPVTKLGRLVREGKIDKLESIYLFSLPIK 257
W PVTKLGRLV++GK+ ++ I+ F + IK
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIK 64
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 42.7 bits (96), Expect = 0.007
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +2
Query: 299 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 478
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 479 PV 484
V
Sbjct: 104 RV 105
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 41.1 bits (92), Expect = 0.023
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +2
Query: 299 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 478
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 479 PV 484
V
Sbjct: 79 EV 80
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 41.1 bits (92), Expect = 0.023
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +2
Query: 293 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 466
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 37.9 bits (84), Expect = 0.21
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Frame = +2
Query: 158 PERVGSCHQTRPSCSRRKNRQTREHLLVFFTNQEFEIIDFFLGPS--LNDEVLKIMPVQK 331
P+ G+ + T S KN + ++ TN + + P ++++ I V
Sbjct: 42 PDHKGTINTTPNDNSTSKNSKDKDFKFKKKTNSQNFKKNANKKPEKEFEEKIVNIARVTN 101
Query: 332 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 484
+ G+R F A V +GD G +G G + EV AI+ A+ A+ +++ V
Sbjct: 102 VVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLIRV 152
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 37.5 bits (83), Expect = 0.28
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2
Query: 323 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 490
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR 405
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.5 bits (83), Expect = 0.28
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 293 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 445
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 37.5 bits (83), Expect = 0.28
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +2
Query: 293 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 472
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 473 VLPVRR 490
++P+RR
Sbjct: 310 MVPIRR 315
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.37
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -1
Query: 454 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 356
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 37.1 bits (82), Expect = 0.37
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 293 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 445
L ++VL + K + G++ F A + +GD G +G G + E+ AIR
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIR 63
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 36.7 bits (81), Expect = 0.49
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +2
Query: 293 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 472
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 473 VLPV 484
++ V
Sbjct: 81 MVRV 84
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 36.7 bits (81), Expect = 0.49
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +1
Query: 535 KVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQDCY 657
+V G+ G+ V L P P+GTGI++ + ++++AG D Y
Sbjct: 139 EVIGRSGASRVLLKPAPQGTGIIAGGAIRAIIELAGYSDIY 179
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 35.9 bits (79), Expect = 0.86
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 296 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 445
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIR 65
Score = 35.1 bits (77), Expect = 1.5
Identities = 16/43 (37%), Positives = 26/43 (60%)
Frame = +1
Query: 523 TVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQD 651
T+P +V K G V L P GTG+++ + +L++AGV+D
Sbjct: 84 TLPHEVEVKFGGARVLLRPASAGTGLIAGGAVRAILELAGVED 126
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 35.9 bits (79), Expect = 0.86
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = -1
Query: 256 LIGKENK*MLSSLSIFPSRTRRPSLVTGTHSF 161
L GKE K + S + I P+ T PSLVTGTH F
Sbjct: 20 LTGKECKKISSMVVILPALTNLPSLVTGTHPF 51
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 35.9 bits (79), Expect = 0.86
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +2
Query: 305 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 484
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 35.5 bits (78), Expect = 1.1
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +2
Query: 323 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 490
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR 378
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 35.1 bits (77), Expect = 1.5
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +2
Query: 290 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 469
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 470 SVLPVRR 490
++ P+RR
Sbjct: 302 NMRPIRR 308
>UniRef50_A7JM26 Cluster: Predicted protein; n=1; Francisella
tularensis subsp. novicida GA99-3548|Rep: Predicted
protein - Francisella tularensis subsp. novicida
GA99-3548
Length = 377
Score = 34.7 bits (76), Expect = 2.0
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 180 TKLGRLVREGKIDKLESIYLFSLPIKNSRSLISSSA 287
TK+GRL I+ ++ +YLF PI N+R+L SSA
Sbjct: 125 TKIGRLQSFQNINSMQGVYLFEAPI-NTRALFQSSA 159
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 34.7 bits (76), Expect = 2.0
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +2
Query: 281 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 460
L ++ +++++I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 461 AKLSVL 478
AK+ L
Sbjct: 150 AKIKAL 155
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 2.0
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 278 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 442
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_Q4QDA2 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 5756
Score = 34.3 bits (75), Expect = 2.6
Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
Frame = -1
Query: 595 QYHEDQESAGLLRNHTCR*PCKGRCVAFLLVTPVTSSDW*N*QLSKDNSASNGSGDFLAA 416
Q + + S LLR+ +C + CVA PV +S+ L + + + G F+
Sbjct: 2679 QQADVRRSGALLRSESCDGDVRPACVADASTDPVLASERNENALQRSPAMAQDRGSFVRL 2738
Query: 415 LHTQTNMTVVVANG--NKCLETCALSGTCLFLYRHDLKNLIIQGRAEEEINDLEFLIG 248
L T+ + N L AL C++L ++ ++ + + D E LIG
Sbjct: 2739 LLTRAAGPTIAPNDALRVLLRGFALPELCVYLSEVAAESAVLGVQQGTAMADAELLIG 2796
>UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila
pseudoobscura|Rep: GA16916-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 391
Score = 34.3 bits (75), Expect = 2.6
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Frame = -2
Query: 177 QEPTLSGLPCRAHDHGRDHDRVHE-DRHGLYLHRV-----IRNRRENRHVHRLEQRPPL 19
+EPT S CR+ GR H R G HR+ IR+ R HRL + PP+
Sbjct: 146 REPTRSPSRCRSRQSGRSHQHPQRRSRSGTRQHRLSREPPIRHSRSISRQHRLSREPPV 204
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 34.3 bits (75), Expect = 2.6
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +2
Query: 290 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 469
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 470 SVLPVRR 490
++ PV R
Sbjct: 314 NMQPVPR 320
>UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1;
Acidobacteria bacterium Ellin345|Rep: Molybdenum
cofactor synthesis-like - Acidobacteria bacterium
(strain Ellin345)
Length = 338
Score = 33.5 bits (73), Expect = 4.6
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Frame = -1
Query: 340 TCLFLYR-HDLKNLIIQGRAEEEIND-LEFLI-GKENK*MLSSLSIFP-SRT 197
TCLF R HDL +LI++G ++EEI D + + + KE + + P SRT
Sbjct: 281 TCLFSVREHDLASLILEGASDEEIADRIRYAVENKEQRHHIGEADFMPASRT 332
>UniRef50_A6NSE6 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 256
Score = 33.5 bits (73), Expect = 4.6
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = -3
Query: 644 TPAI*RSFLGTGADTIPVPRGSGISRTVTEP 552
TP + RS G GA T+P RGSG+ T T P
Sbjct: 142 TPVLSRSLSGIGAVTMPNARGSGLLATFTAP 172
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 33.5 bits (73), Expect = 4.6
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +1
Query: 523 TVPCKVTGKCGSVTVRLIPDPRGTGIVSAPVPKKLLQMAGVQD 651
++P +V G+ G+ V LIP GTGI++ + + + G+ D
Sbjct: 90 SIPHQVWGRYGAARVVLIPAGAGTGIIAGQAVRAVCEACGIHD 132
>UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2;
Ostreococcus|Rep: COG0457: FOG: TPR repeat - Ostreococcus
tauri
Length = 1474
Score = 33.1 bits (72), Expect = 6.0
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 4/37 (10%)
Frame = -1
Query: 364 LETCALSGTCLFLYRHDLKNLI----IQGRAEEEIND 266
LE+CAL TC+ +Y HD+ ++ + +A+E+++D
Sbjct: 965 LESCALDDTCVIVYEHDMNRVMLCRTLVSKAKEKLSD 1001
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 6.0
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 305 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 451
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,209,612
Number of Sequences: 1657284
Number of extensions: 14040740
Number of successful extensions: 42673
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 39491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42292
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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