Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--1069
(659 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9U505 Cluster: ATP synthase lipid-binding protein, mit... 99 5e-20
UniRef50_P48201 Cluster: ATP synthase lipid-binding protein, mit... 67 3e-10
UniRef50_P05496 Cluster: ATP synthase lipid-binding protein, mit... 67 3e-10
UniRef50_UPI0000D573BE Cluster: PREDICTED: similar to CG13320-PA... 57 3e-07
UniRef50_P48880 Cluster: ATP synthase protein 9, mitochondrial; ... 57 4e-07
UniRef50_UPI0000E25CD7 Cluster: PREDICTED: hypothetical protein ... 56 8e-07
UniRef50_Q01554 Cluster: ATP synthase protein 9, mitochondrial; ... 52 2e-05
UniRef50_P60112 Cluster: ATP synthase protein 9, mitochondrial; ... 48 3e-04
UniRef50_Q4Q9E5 Cluster: ATPase subunit 9, putative; n=15; Trypa... 46 6e-04
UniRef50_P00842 Cluster: ATP synthase protein 9, mitochondrial p... 46 0.001
UniRef50_UPI0000EBC8A1 Cluster: PREDICTED: hypothetical protein;... 45 0.001
UniRef50_A6RZ18 Cluster: Lipid-binding protein; n=2; Sclerotinia... 44 0.004
UniRef50_A3E3Y1 Cluster: Lipid-binding protein; n=1; Karlodinium... 40 0.053
UniRef50_Q7RI18 Cluster: ATPase subunit 9, putative; n=4; Plasmo... 38 0.16
UniRef50_Q4N435 Cluster: ATP synthase F0, subunit C, putative; n... 38 0.28
UniRef50_Q37315 Cluster: ATP synthase protein 9, mitochondrial; ... 37 0.37
UniRef50_Q6CI90 Cluster: Similar to sp|P47179 Saccharomyces cere... 35 1.5
UniRef50_A6R851 Cluster: Predicted protein; n=1; Ajellomyces cap... 35 1.5
UniRef50_Q6H8E1 Cluster: PHD finger protein-like; n=4; Oryza sat... 35 2.0
UniRef50_Q5FRW6 Cluster: ATP synthase C chain; n=4; Rhodospirill... 34 3.5
UniRef50_Q1DF55 Cluster: Dual specificity phosphatase; n=1; Myxo... 34 3.5
UniRef50_P18488 Cluster: Homeotic protein empty spiracles; n=3; ... 34 3.5
UniRef50_Q5ILI3 Cluster: ATP synthase F0 subunit c; n=1; Polysph... 33 4.6
UniRef50_Q7RU59 Cluster: Putative uncharacterized protein B2A19.... 33 4.6
UniRef50_Q757P9 Cluster: AEL037Cp; n=1; Eremothecium gossypii|Re... 33 4.6
UniRef50_A1SHI6 Cluster: ATP synthase C chain; n=7; Actinomyceta... 33 6.1
UniRef50_UPI00015B63BD Cluster: PREDICTED: similar to protein-(g... 33 8.0
UniRef50_UPI000065F4A6 Cluster: Homolog of Homo sapiens "Keratin... 33 8.0
UniRef50_Q3MLL0 Cluster: Putative movement protein; n=1; Nemesia... 33 8.0
UniRef50_Q2U876 Cluster: WD40 repeat; n=1; Aspergillus oryzae|Re... 33 8.0
>UniRef50_Q9U505 Cluster: ATP synthase lipid-binding protein,
mitochondrial precursor; n=143; Eukaryota|Rep: ATP
synthase lipid-binding protein, mitochondrial precursor
- Manduca sexta (Tobacco hawkmoth) (Tobacco hornworm)
Length = 131
Score = 99 bits (238), Expect = 5e-20
Identities = 49/57 (85%), Positives = 52/57 (91%)
Frame = +3
Query: 84 FCNSALVRPLAAVPTHTQMVPAVPTQLSAVRSFQTTSVTKDIDSAAKFIGAGAATVG 254
F N+A+VRPLAAV T TQ+VPA P QLSAVRSFQTTSVTKDIDSAAKFIGAGAATVG
Sbjct: 17 FSNAAVVRPLAAVSTQTQLVPAAPAQLSAVRSFQTTSVTKDIDSAAKFIGAGAATVG 73
Score = 67.3 bits (157), Expect = 3e-10
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +2
Query: 281 TVFGSLIIGYARNPSLKQQLFSYAILGFALSE 376
TVFGSLIIGYARNPSLKQQLFSYAILGFALSE
Sbjct: 83 TVFGSLIIGYARNPSLKQQLFSYAILGFALSE 114
>UniRef50_P48201 Cluster: ATP synthase lipid-binding protein,
mitochondrial precursor; n=111; cellular organisms|Rep:
ATP synthase lipid-binding protein, mitochondrial
precursor - Homo sapiens (Human)
Length = 142
Score = 67.3 bits (157), Expect = 3e-10
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +2
Query: 281 TVFGSLIIGYARNPSLKQQLFSYAILGFALSE 376
TVFGSLIIGYARNPSLKQQLFSYAILGFALSE
Sbjct: 94 TVFGSLIIGYARNPSLKQQLFSYAILGFALSE 125
Score = 47.6 bits (108), Expect = 3e-04
Identities = 20/27 (74%), Positives = 26/27 (96%)
Frame = +3
Query: 174 RSFQTTSVTKDIDSAAKFIGAGAATVG 254
R FQT+++++DID+AAKFIGAGAATVG
Sbjct: 58 REFQTSAISRDIDTAAKFIGAGAATVG 84
>UniRef50_P05496 Cluster: ATP synthase lipid-binding protein,
mitochondrial precursor; n=16; Eutheria|Rep: ATP
synthase lipid-binding protein, mitochondrial precursor
- Homo sapiens (Human)
Length = 136
Score = 67.3 bits (157), Expect = 3e-10
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +2
Query: 281 TVFGSLIIGYARNPSLKQQLFSYAILGFALSE 376
TVFGSLIIGYARNPSLKQQLFSYAILGFALSE
Sbjct: 88 TVFGSLIIGYARNPSLKQQLFSYAILGFALSE 119
Score = 52.4 bits (120), Expect = 9e-06
Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 7/63 (11%)
Frame = +3
Query: 87 CNSALVRPLAAV----PTHTQMVPAV---PTQLSAVRSFQTTSVTKDIDSAAKFIGAGAA 245
C L+RP++A P ++ P+ P Q+ A R FQT+ V++DID+AAKFIGAGAA
Sbjct: 17 CTRGLIRPVSASFLNSPVNSSKQPSYSNFPLQV-ARREFQTSVVSRDIDTAAKFIGAGAA 75
Query: 246 TVG 254
TVG
Sbjct: 76 TVG 78
>UniRef50_UPI0000D573BE Cluster: PREDICTED: similar to CG13320-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG13320-PA, isoform A - Tribolium castaneum
Length = 378
Score = 57.2 bits (132), Expect = 3e-07
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = +3
Query: 156 TQLSAVRSFQTTSVTKDIDSAAKFIGAGAATVG 254
T L AVRSFQTT V++DIDSAAKFIGAGAATVG
Sbjct: 30 TLLPAVRSFQTTPVSRDIDSAAKFIGAGAATVG 62
>UniRef50_P48880 Cluster: ATP synthase protein 9, mitochondrial;
n=4; Eukaryota|Rep: ATP synthase protein 9,
mitochondrial - Chondrus crispus (Carragheen)
Length = 76
Score = 56.8 bits (131), Expect = 4e-07
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +2
Query: 284 VFGSLIIGYARNPSLKQQLFSYAILGFALSE 376
VFGSL++ YARNPSLKQQLF Y ILGFAL+E
Sbjct: 30 VFGSLVMAYARNPSLKQQLFGYTILGFALTE 60
>UniRef50_UPI0000E25CD7 Cluster: PREDICTED: hypothetical protein
isoform 2; n=1; Pan troglodytes|Rep: PREDICTED:
hypothetical protein isoform 2 - Pan troglodytes
Length = 80
Score = 56.0 bits (129), Expect = 8e-07
Identities = 25/66 (37%), Positives = 39/66 (59%)
Frame = -2
Query: 418 EQQERHHKTEQTHSLRQGETQNGV*EQLLLEGGVPGIADDEGAEDCSNTSSGTSYPTVAA 239
E ++ HH+ + H L +G+ Q+GV E+LLL+ VPGI +DE + N S S+P +
Sbjct: 8 EDEKGHHQAKAPHGLSEGKAQSGVGEELLLQRRVPGITNDEAPKHSPNLSRRASHPNCGS 67
Query: 238 PAPMNL 221
P+ L
Sbjct: 68 PSSNEL 73
>UniRef50_Q01554 Cluster: ATP synthase protein 9, mitochondrial;
n=22; Eukaryota|Rep: ATP synthase protein 9,
mitochondrial - Trichophyton rubrum
Length = 74
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = +2
Query: 284 VFGSLIIGYARNPSLKQQLFSYAILGFALSE 376
VFG+LI+G ARNPSL+ LFSYAILGFA SE
Sbjct: 27 VFGALILGVARNPSLRGLLFSYAILGFAFSE 57
>UniRef50_P60112 Cluster: ATP synthase protein 9, mitochondrial;
n=72; Eukaryota|Rep: ATP synthase protein 9,
mitochondrial - Arabidopsis thaliana (Mouse-ear cress)
Length = 85
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/31 (74%), Positives = 25/31 (80%)
Frame = +2
Query: 284 VFGSLIIGYARNPSLKQQLFSYAILGFALSE 376
VF SLI ARNPSL +QLF YAILGFAL+E
Sbjct: 38 VFSSLIHSVARNPSLAKQLFGYAILGFALTE 68
>UniRef50_Q4Q9E5 Cluster: ATPase subunit 9, putative; n=15;
Trypanosomatidae|Rep: ATPase subunit 9, putative -
Leishmania major
Length = 252
Score = 46.4 bits (105), Expect = 6e-04
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = +2
Query: 284 VFGSLIIGYARNPSLKQQLFSYAILGFALSE 376
+FG L+IG AR P+L + LF+YAILGFAL+E
Sbjct: 206 IFGCLLIGCARQPNLTKMLFNYAILGFALTE 236
>UniRef50_P00842 Cluster: ATP synthase protein 9, mitochondrial
precursor; n=14; Pezizomycotina|Rep: ATP synthase
protein 9, mitochondrial precursor - Neurospora crassa
Length = 147
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +2
Query: 284 VFGSLIIGYARNPSLKQQLFSYAILGFALSE 376
VF +L+ G ARNP+L+ QLFSYAILGFA E
Sbjct: 101 VFAALLNGVARNPALRGQLFSYAILGFAFVE 131
>UniRef50_UPI0000EBC8A1 Cluster: PREDICTED: hypothetical protein;
n=2; Eutheria|Rep: PREDICTED: hypothetical protein - Bos
taurus
Length = 105
Score = 45.2 bits (102), Expect = 0.001
Identities = 30/64 (46%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Frame = -2
Query: 253 PTVAAPAPMNLAAESMSLVTDVVWKDRTAESCV----GTAGTICVWVGTAASGR--TSAE 92
PTVAAPAPMNLAA SMSL +VWK R S V GT + + SGR T+A+
Sbjct: 18 PTVAAPAPMNLAAVSMSLEMALVWKLRLGVSEVVRGRGTTAKLLWLSSVSVSGRLTTTAD 77
Query: 91 LQKM 80
++
Sbjct: 78 SDRL 81
Score = 35.9 bits (79), Expect = 0.86
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -3
Query: 303 MMREPKTVPIPAPEPAIP 250
MMR P TVPIPAPEPA P
Sbjct: 1 MMRLPNTVPIPAPEPATP 18
>UniRef50_A6RZ18 Cluster: Lipid-binding protein; n=2;
Sclerotiniaceae|Rep: Lipid-binding protein - Botryotinia
fuckeliana B05.10
Length = 149
Score = 43.6 bits (98), Expect = 0.004
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +2
Query: 284 VFGSLIIGYARNPSLKQQLFSYAILGFALSE 376
VF +L+ ARNPS++ QLFSYAILGFA E
Sbjct: 103 VFAALLQAVARNPSMRGQLFSYAILGFAFVE 133
>UniRef50_A3E3Y1 Cluster: Lipid-binding protein; n=1; Karlodinium
micrum|Rep: Lipid-binding protein - Karlodinium micrum
(Dinoflagellate)
Length = 130
Score = 39.9 bits (89), Expect = 0.053
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +2
Query: 284 VFGSLIIGYARNPSLKQQLFSYAILGFALSE 376
+F +L++G ARNPS+K+ LF+Y ++G E
Sbjct: 83 LFAALVVGMARNPSMKEDLFTYTLIGMGFLE 113
>UniRef50_Q7RI18 Cluster: ATPase subunit 9, putative; n=4;
Plasmodium|Rep: ATPase subunit 9, putative - Plasmodium
yoelii yoelii
Length = 189
Score = 38.3 bits (85), Expect = 0.16
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +2
Query: 281 TVFGSLIIGYARNPSLKQQLFSYAILGFALSE 376
++F +L++G +RNPS+K +LF+Y ++G E
Sbjct: 118 SLFSALVLGTSRNPSIKDELFTYTLIGMGFLE 149
>UniRef50_Q4N435 Cluster: ATP synthase F0, subunit C, putative; n=3;
Piroplasmida|Rep: ATP synthase F0, subunit C, putative -
Theileria parva
Length = 163
Score = 37.5 bits (83), Expect = 0.28
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 284 VFGSLIIGYARNPSLKQQLFSYAILGFALSE 376
+F +L+ G ARNPS+K+ LF+Y ++G E
Sbjct: 117 LFAALVSGTARNPSIKEDLFTYTLIGMGFLE 147
>UniRef50_Q37315 Cluster: ATP synthase protein 9, mitochondrial;
n=11; Eukaryota|Rep: ATP synthase protein 9,
mitochondrial - Dictyostelium discoideum (Slime mold)
Length = 88
Score = 37.1 bits (82), Expect = 0.37
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2
Query: 284 VFGSLIIGYARNPSLKQQLFSYAILGFALSE 376
VF + I+ NP+L+ +LF A+LGFALSE
Sbjct: 42 VFAAFILAVGMNPNLRGELFKLAMLGFALSE 72
>UniRef50_Q6CI90 Cluster: Similar to sp|P47179 Saccharomyces
cerevisiae YJR151c; n=1; Yarrowia lipolytica|Rep:
Similar to sp|P47179 Saccharomyces cerevisiae YJR151c -
Yarrowia lipolytica (Candida lipolytica)
Length = 466
Score = 35.1 bits (77), Expect = 1.5
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 138 MVPAVP-TQLSAVRSFQTTSVTKDIDSAAKFIGAGAATVG*LVPELVLEQSSAPSSSAMP 314
M+ +P T +SAV + TT + D A+ I + + G P +LE S+ P+SS +
Sbjct: 1 MLSLIPLTLVSAVLAQNTTDIISDPPGASTTIDSSTESPGASTPVELLESSTLPTSSTVD 60
Query: 315 GTP 323
TP
Sbjct: 61 STP 63
>UniRef50_A6R851 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 456
Score = 35.1 bits (77), Expect = 1.5
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
Frame = +2
Query: 65 CSQVCHLLQL--CTGATTCSSTHPYTDGTCCPYTALCSAVLP 184
C Q HL + C + P+ DGTCCP+ +L +P
Sbjct: 57 CDQAIHLFHVKETLYLLRCRQSTPHLDGTCCPHLSLADGAIP 98
>UniRef50_Q6H8E1 Cluster: PHD finger protein-like; n=4; Oryza
sativa|Rep: PHD finger protein-like - Oryza sativa subsp.
japonica (Rice)
Length = 1119
Score = 34.7 bits (76), Expect = 2.0
Identities = 25/84 (29%), Positives = 34/84 (40%)
Frame = -3
Query: 291 PKTVPIPAPEPAIPLSLHQHQ*IWQQSQCP**PMWSGRTALQRAV*GQQVPSVYGWVLLQ 112
P T P P P P SL Q +Q Q ++ + ALQ + +P Y L+
Sbjct: 989 PPTPQQPLPPPPPPPSLQQLHHPYQHQQQQQQQLYHHQNALQPQIPSNSIPQAY----LR 1044
Query: 111 VVAPVQSCRRWQTWLQGRSVWRQT 40
P+Q Q LQ W+QT
Sbjct: 1045 TQQPLQQLPLMQQQLQPAQAWQQT 1068
>UniRef50_Q5FRW6 Cluster: ATP synthase C chain; n=4;
Rhodospirillales|Rep: ATP synthase C chain -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 85
Score = 33.9 bits (74), Expect = 3.5
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2
Query: 284 VFGSLIIGYARNPSLKQQLFSYAILGFALSE 376
+F +LI ARNP+ + +F +LGFAL+E
Sbjct: 39 IFSTLISSVARNPASRPHVFGIGMLGFALTE 69
>UniRef50_Q1DF55 Cluster: Dual specificity phosphatase; n=1;
Myxococcus xanthus DK 1622|Rep: Dual specificity
phosphatase - Myxococcus xanthus (strain DK 1622)
Length = 193
Score = 33.9 bits (74), Expect = 3.5
Identities = 19/41 (46%), Positives = 21/41 (51%)
Frame = -3
Query: 174 ALQRAV*GQQVPSVYGWVLLQVVAPVQSCRRWQTWLQGRSV 52
AL R V VP V GWV QV+ V C W T L GR +
Sbjct: 4 ALLREV--HHVPGVRGWVRKQVLRSVARCVEWTTKLPGRGL 42
>UniRef50_P18488 Cluster: Homeotic protein empty spiracles; n=3;
Sophophora|Rep: Homeotic protein empty spiracles -
Drosophila melanogaster (Fruit fly)
Length = 497
Score = 33.9 bits (74), Expect = 3.5
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 132 TQMVPAVPTQLSAVRSFQTTSVTKDIDSAAKFIGAGAATVG*-LVPELVLEQSSAPSSSA 308
T+M+P VPT +AV T K S +G +T G P+L QS P
Sbjct: 2 TKMIPPVPTAAAAV--MMPTPKQKIGFSIESIVGNDVSTAGGNSTPDLSGPQSPPPGERN 59
Query: 309 MPGTPP 326
+PG+PP
Sbjct: 60 VPGSPP 65
>UniRef50_Q5ILI3 Cluster: ATP synthase F0 subunit c; n=1;
Polysphondylium pallidum|Rep: ATP synthase F0 subunit c
- Polysphondylium pallidum (Cellular slime mold)
Length = 87
Score = 33.5 bits (73), Expect = 4.6
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 284 VFGSLIIGYARNPSLKQQLFSYAILGFALSE 376
VF + ++ + NP+L+ +LF +LGFAL+E
Sbjct: 41 VFAAFVLSVSFNPNLRGELFKLTMLGFALTE 71
>UniRef50_Q7RU59 Cluster: Putative uncharacterized protein B2A19.20;
n=2; Neurospora crassa|Rep: Putative uncharacterized
protein B2A19.20 - Neurospora crassa
Length = 419
Score = 33.5 bits (73), Expect = 4.6
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +1
Query: 106 DHLQQYPPIHRWYLLSLHSSLQCGPSRPHRSLRTLTLLPNSLVLVQRQWDSWFRSWYWNS 285
D ++PP+H W + + S + L + N V+ QW W + YW+
Sbjct: 234 DQDNRFPPVHMWPQ-GEYPGEEIARSYQNYKAGALEVAHNVEVICCPQWTRWLTADYWSP 292
Query: 286 LRLPHHR-LCQEPLP 327
+R + + LC +P
Sbjct: 293 IRYEYFKALCSTAVP 307
>UniRef50_Q757P9 Cluster: AEL037Cp; n=1; Eremothecium gossypii|Rep:
AEL037Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 466
Score = 33.5 bits (73), Expect = 4.6
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -2
Query: 280 SNTSSGTSYPTVAAPAPMNLAAESMSLVTDVVWKDRTAESCV 155
S TS T+Y T +P P + + +M +D +DRT SCV
Sbjct: 384 SPTSCATTYGTAQSPIPASSSRHTMPCTSDWSSRDRTITSCV 425
>UniRef50_A1SHI6 Cluster: ATP synthase C chain; n=7;
Actinomycetales|Rep: ATP synthase C chain - Nocardioides
sp. (strain BAA-499 / JS614)
Length = 69
Score = 33.1 bits (72), Expect = 6.1
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2
Query: 284 VFGSLIIGYARNPSLKQQLFSYAILGFALSE 376
+F + I G AR P + +L + AILGFAL+E
Sbjct: 26 IFAAYISGVARQPEAQSRLQAIAILGFALAE 56
>UniRef50_UPI00015B63BD Cluster: PREDICTED: similar to
protein-(glutamine-N5) methyl transferase, putative;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
protein-(glutamine-N5) methyl transferase, putative -
Nasonia vitripennis
Length = 343
Score = 32.7 bits (71), Expect = 8.0
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 2 FVVARRTLYKQNAVCRQTDRPCSQVCHLLQLCTGATTCS 118
F+ R+T + + + DR CS++CH+L++ GA S
Sbjct: 135 FIPERQTEILVDLLLKHVDRSCSKICHVLEIGCGAGAIS 173
>UniRef50_UPI000065F4A6 Cluster: Homolog of Homo sapiens "Keratin
associated protein 5-9; n=1; Takifugu rubripes|Rep:
Homolog of Homo sapiens "Keratin associated protein 5-9
- Takifugu rubripes
Length = 191
Score = 32.7 bits (71), Expect = 8.0
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +2
Query: 38 AVCRQTDRPCSQV-CHLLQLCTGATTCSSTHPYTDGTCCPYTALCSAVLP 184
A CR CS CH L LC G + C P C +LC +++P
Sbjct: 120 APCRGLSPCCSLASCHGLSLCHGLSLCRGLSPCCSLAPCRGLSLCHSLIP 169
>UniRef50_Q3MLL0 Cluster: Putative movement protein; n=1; Nemesia
ring necrosis virus|Rep: Putative movement protein -
Nemesia ring necrosis virus
Length = 632
Score = 32.7 bits (71), Expect = 8.0
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -2
Query: 322 GVPGIADDEGAEDCSNTSSGTSYPTVAAPAPMNLAAESMSL 200
G P + CS+ SGTS PT++AP +E +SL
Sbjct: 569 GQPSSVSRPSSPSCSSLDSGTSTPTISAPTRTERRSEHVSL 609
>UniRef50_Q2U876 Cluster: WD40 repeat; n=1; Aspergillus oryzae|Rep:
WD40 repeat - Aspergillus oryzae
Length = 1289
Score = 32.7 bits (71), Expect = 8.0
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = +1
Query: 196 SLRTLTLLPNSLVLVQRQWDSWFRSW---YWNSLRLPH 300
S+ +L P+S L WD+W R W W +++PH
Sbjct: 871 SMSSLAFSPDSQRLAATCWDNWIRVWDTVTWTEIKVPH 908
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 707,075,770
Number of Sequences: 1657284
Number of extensions: 15354598
Number of successful extensions: 56761
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 51434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56618
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50000004659
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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