Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1069
         (659 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   1.2  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    26   1.2  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    26   1.2  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    26   1.2  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    25   2.1  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    25   2.8  
AY330180-1|AAQ16286.1|  176|Anopheles gambiae odorant-binding pr...    24   3.7  
AJ618924-1|CAF02003.1|  144|Anopheles gambiae odorant-binding pr...    24   3.7  
AF393486-1|AAL60411.1|  162|Anopheles gambiae twelve cysteine pr...    24   4.9  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    24   4.9  
AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14...    23   6.5  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   8.5  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = -2

Query: 442 KVNSLESEEQQERHHKTEQTHSLRQGETQ 356
           ++  L+ ++QQ+ HH+ +Q  S  Q ++Q
Sbjct: 240 QLERLQQQQQQQTHHQQQQHPSSHQQQSQ 268


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = -2

Query: 442 KVNSLESEEQQERHHKTEQTHSLRQGETQ 356
           ++  L+ ++QQ+ HH+ +Q  S  Q ++Q
Sbjct: 240 QLERLQQQQQQQTHHQQQQHPSSHQQQSQ 268


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = -2

Query: 442 KVNSLESEEQQERHHKTEQTHSLRQGETQ 356
           ++  L+ ++QQ+ HH+ +Q  S  Q ++Q
Sbjct: 192 QLERLQQQQQQQTHHQQQQHPSSHQQQSQ 220


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 9/29 (31%), Positives = 19/29 (65%)
 Frame = -2

Query: 442 KVNSLESEEQQERHHKTEQTHSLRQGETQ 356
           ++  L+ ++QQ+ HH+ +Q  S  Q ++Q
Sbjct: 240 QLERLQQQQQQQTHHQQQQHPSSHQQQSQ 268


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 9/25 (36%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
 Frame = -1

Query: 167 RELCRDSRYHLCMGGY-CCKWSHQC 96
           ++LC +++  L MGG+   KW+  C
Sbjct: 882 KQLCEETKAALAMGGFPLRKWASNC 906


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = -1

Query: 254 SHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYCCKWSHQCRVAE 84
           S+CR T+      R N L  RCGL G   R    +++  LC G +    S   R A+
Sbjct: 519 SNCRSTA-----DRQN-LCIRCGLTGHKARSCQNEAKCALCGGAHHIGHSECARSAQ 569


>AY330180-1|AAQ16286.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP54 protein.
          Length = 176

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
 Frame = -2

Query: 298 EGAEDCSNTSSGTSYPTVAAPAPMNLAAESMSLVT--DVV------WKDRTAESCVGTAG 143
           +GAEDCS++   TS P       +    +S+ L+   D+V      + DR      GTA 
Sbjct: 51  DGAEDCSSSVDETSEPHDKMMCTLECKLKSLGLLNGDDLVEAKVQEYIDRLEGDWKGTAK 110

Query: 142 TI 137
           TI
Sbjct: 111 TI 112


>AJ618924-1|CAF02003.1|  144|Anopheles gambiae odorant-binding
           protein OBP5470 protein.
          Length = 144

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
 Frame = -2

Query: 298 EGAEDCSNTSSGTSYPTVAAPAPMNLAAESMSLVT--DVV------WKDRTAESCVGTAG 143
           +GAEDCS++   TS P       +    +S+ L+   D+V      + DR      GTA 
Sbjct: 14  DGAEDCSSSVDETSEPHDKMMCTLECKLKSLGLLNGDDLVEAKVQEYIDRLEGDWKGTAK 73

Query: 142 TI 137
           TI
Sbjct: 74  TI 75


>AF393486-1|AAL60411.1|  162|Anopheles gambiae twelve cysteine
           protein 1 protein.
          Length = 162

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -2

Query: 298 EGAEDCSNTSSGTSYPTVAAPAPMNLAAESMSLV 197
           +GAEDCS++   TS P       +    +S+ L+
Sbjct: 51  DGAEDCSSSVDETSEPHDKMMCTLECKLKSLGLL 84


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +1

Query: 76  LPSSATLHWCDHLQQYPPIHRWYLLSLHSSLQCGPSRPH 192
           LP SAT  W     Q+ P H  ++    SS Q     PH
Sbjct: 19  LPYSATTGWYPSNYQHQPPHPQFIGDGESSPQPAMYYPH 57


>AF117749-1|AAD38335.1|  372|Anopheles gambiae serine protease 14D2
           protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -1

Query: 98  CRVAEDGRPGCRGDQSG 48
           C   E G+  CRGD  G
Sbjct: 304 CAGGEKGKDSCRGDSGG 320


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 176 PHCRELCRDSRYH 138
           P CR +C D+R H
Sbjct: 858 PICRAICEDTRVH 870


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 772,969
Number of Sequences: 2352
Number of extensions: 17489
Number of successful extensions: 49
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)