Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1068
         (646 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC051871-1|AAH51871.1|  376|Homo sapiens chromosome 12 open read...   114   2e-25
BC013956-1|AAH13956.2|  322|Homo sapiens C12orf10 protein protein.    114   2e-25
AF289485-1|AAG17847.1|  376|Homo sapiens MYG1 homolog protein.        114   2e-25

>BC051871-1|AAH51871.1|  376|Homo sapiens chromosome 12 open reading
           frame 10 protein.
          Length = 376

 Score =  114 bits (275), Expect = 2e-25
 Identities = 48/76 (63%), Positives = 59/76 (77%)
 Frame = +2

Query: 263 KIGTHDGVFHCDEVLACFMLKNLPQYKDAEIIRTRDLNKLNDCDIVVDVGSVFDHEKKRY 442
           +IGTH+G FHCDE LAC +L+ LP+Y+DAEI+RTRD  KL  CDIVVDVG  +D  + RY
Sbjct: 46  RIGTHNGTFHCDEALACALLRLLPEYRDAEIVRTRDPEKLASCDIVVDVGGEYDPRRHRY 105

Query: 443 DHHQAGFNETLSTLRP 490
           DHHQ  F ET+S+L P
Sbjct: 106 DHHQRSFTETMSSLSP 121



 Score = 37.9 bits (84), Expect = 0.031
 Identities = 18/44 (40%), Positives = 29/44 (65%)
 Frame = +1

Query: 514 KLSSAGLVYAYYGEDIIQQLKEESTSLTNEDLKLIYKKVYESFI 645
           KLSSAGL+Y ++G  ++ QL    TS  +  +  +Y K+YE+F+
Sbjct: 128 KLSSAGLIYLHFGHKLLAQLL--GTSEEDSMVGTLYDKMYENFV 169


>BC013956-1|AAH13956.2|  322|Homo sapiens C12orf10 protein protein.
          Length = 322

 Score =  114 bits (275), Expect = 2e-25
 Identities = 48/76 (63%), Positives = 59/76 (77%)
 Frame = +2

Query: 263 KIGTHDGVFHCDEVLACFMLKNLPQYKDAEIIRTRDLNKLNDCDIVVDVGSVFDHEKKRY 442
           +IGTH+G FHCDE LAC +L+ LP+Y+DAEI+RTRD  KL  CDIVVDVG  +D  + RY
Sbjct: 43  RIGTHNGTFHCDEALACALLRLLPEYRDAEIVRTRDPEKLASCDIVVDVGGEYDPRRHRY 102

Query: 443 DHHQAGFNETLSTLRP 490
           DHHQ  F ET+S+L P
Sbjct: 103 DHHQRSFTETMSSLSP 118


>AF289485-1|AAG17847.1|  376|Homo sapiens MYG1 homolog protein.
          Length = 376

 Score =  114 bits (275), Expect = 2e-25
 Identities = 48/76 (63%), Positives = 59/76 (77%)
 Frame = +2

Query: 263 KIGTHDGVFHCDEVLACFMLKNLPQYKDAEIIRTRDLNKLNDCDIVVDVGSVFDHEKKRY 442
           +IGTH+G FHCDE LAC +L+ LP+Y+DAEI+RTRD  KL  CDIVVDVG  +D  + RY
Sbjct: 46  RIGTHNGTFHCDEALACALLRLLPEYRDAEIVRTRDPEKLASCDIVVDVGGEYDPRRHRY 105

Query: 443 DHHQAGFNETLSTLRP 490
           DHHQ  F ET+S+L P
Sbjct: 106 DHHQRSFTETMSSLSP 121



 Score = 35.9 bits (79), Expect = 0.12
 Identities = 17/44 (38%), Positives = 28/44 (63%)
 Frame = +1

Query: 514 KLSSAGLVYAYYGEDIIQQLKEESTSLTNEDLKLIYKKVYESFI 645
           KLSSAGL+Y ++G  ++ QL   S    +  +  +Y K+YE+F+
Sbjct: 128 KLSSAGLIYLHFGHKLLAQLLGPSEE--DSMVGTLYDKMYENFV 169


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,220,087
Number of Sequences: 237096
Number of extensions: 1436295
Number of successful extensions: 3335
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3335
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)