Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--1067
         (642 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.8  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.8  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   2.8  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   6.5  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   8.6  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   8.6  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 201 YTFLVKFYLT*HRLCY 154
           YTFL+++Y T  + CY
Sbjct: 59  YTFLLEWYHTLSKACY 74


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 178 IEFYQERVVYLILHHIIFVITV 243
           I FY+   +  I   +IF++TV
Sbjct: 71  ISFYKSTAILEIAFEVIFIVTV 92


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 11/39 (28%), Positives = 24/39 (61%)
 Frame = -3

Query: 454 LVMIITLLFMVKNTSYINNYITVIQLI*ISCADDLSIFV 338
           L+  IT ++ V    Y+N +++ IQL+ +    D+S+++
Sbjct: 41  LIYTITEIYSVYERRYMNAHLSGIQLV-VRNLLDISLYL 78


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 242 FVKYLKMKIGTHDGVFHCD 298
           F  Y +  +GT + VF CD
Sbjct: 435 FQMYAQFIVGTFNSVFICD 453


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/22 (27%), Positives = 16/22 (72%)
 Frame = -3

Query: 448 MIITLLFMVKNTSYINNYITVI 383
           M++ +L + +  + +NNY+T++
Sbjct: 172 MMLLMLEIWRRFTILNNYLTIV 193


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/22 (27%), Positives = 16/22 (72%)
 Frame = -3

Query: 448 MIITLLFMVKNTSYINNYITVI 383
           M++ +L + +  + +NNY+T++
Sbjct: 168 MMLLMLEIWRRFTILNNYLTIV 189


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,748
Number of Sequences: 336
Number of extensions: 2792
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)